Fields »
ABOUT
HELP
BLOG
PPIL4

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:20.7TPM
GTEx:12.0RPKM
FANTOM5:27.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA031600

  

Adipocytes

 Not detected  

Fibroblasts

 Low  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA031600

  

Adipocytes

 Low  

Fibroblasts

 Medium  

Peripheral nerve

 Not detected  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

20.7
N/A Female, age 80
Sample 1
TPM: 20.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 16.9
N/A Female, age 57
Sample 3
TPM: 14.9
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 23.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 27.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

12.0

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 11.9
Samples: 350

Max RPKM: 20.1
Min RPKM: 7.2
Std RPKM: 2
Median RPKM: 11.8
GTEX-POYW-0726-SM-2XCEO 20.1
GTEX-TSE9-0226-SM-3DB84 20.1
GTEX-ZE7O-0226-SM-5S2N1 19.1
GTEX-QDT8-0226-SM-32PL4 18.4
GTEX-145LS-0226-SM-5O9A5 17.4
GTEX-OIZI-0226-SM-2XCEE 17.3
GTEX-QEL4-0326-SM-3GAE5 16.7
GTEX-RVPU-2326-SM-2TF6R 16.2
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 12.2
Samples: 227

Max RPKM: 19.8
Min RPKM: 5.9
Std RPKM: 2.8
Median RPKM: 12.2
GTEX-113JC-0726-SM-5GZZR 19.8
GTEX-WFJO-1026-SM-3GIKL 19.6
GTEX-12KS4-1526-SM-5EQ6E 19.5
GTEX-117YW-0826-SM-5H11O 19.1
GTEX-13VXU-1026-SM-5KLZE 18.8
GTEX-13JUV-0626-SM-5J1MQ 18.0
GTEX-11NV4-1426-SM-5BC4W 17.9
GTEX-1399T-1326-SM-5PNVH 17.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

27.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 27.6
FF:10010-101C1 65,65,76 years, mixed 27.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.