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Validation

Method

Validation

Method

Validation

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Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA045280

 

Antibody HPA047236

 

Antibody HPA047744

 

Antibody CAB009591

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
  Novocastra
 

Product name

HPA045280   HPA047236   HPA047744   NCL-Napsin A  

Host species

Rabbit   Rabbit   Rabbit   Mouse  

Clonality

pAb   pAb   pAb   mAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand   Not known  

Other gene match

       

Released in version

12   12   12   4  

References

       

VALIDATION SUMMARY

 
 

Antibody HPA045280

 

Antibody HPA047236

 

Antibody HPA047744

 

Antibody CAB009591

 
Immunohistochemistry


Validated
  Supported  

Validated
 

Validated
 
Western blot

Uncertain   Uncertain   Uncertain   Uncertain  
Protein array

Supported   Supported   Supported    

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA045280

 

Antibody HPA047236

 

Antibody HPA047744

 

Antibody CAB009591

 

Formal validation: Orthogonal

     
Validated

Pearson correlation >0.6 for protein and RNA expression in cell lines.
 

     
 

 

 

Figure description

      Distribution of protein expression (antibody staining) and RNA expression (TPM) across 39 cell lines.  
 

Formal validation: Independent

Validated

Pearson correlation >0.6 for protein expression in cell lines using independent antibodies.
   
Validated

Pearson correlation >0.6 for protein expression in cell lines using independent antibodies.
   

 

   
 

   

Figure description

Distribution of protein expression (antibody staining).
Pearson correlation with HPA047744 across 46 cell lines.
    Distribution of protein expression (antibody staining).
Pearson correlation with HPA045280 across 46 cell lines.
   
 

Standard validation

Supported   Supported   Supported   Supported  

       

Figure description

Immunohistochemical staining of human lung shows strong cytoplasmic positivity in pneumocytes and macrophages.   Immunohistochemical staining of human lung shows strong cytoplasmic positivity in type 2 pneumocytes.   Immunohistochemical staining of human lung shows strong cytoplasmic positivity in granular pattern in type II pneumocytes.   Immunohistochemical staining of human lung shows strong cytoplasmic positivity in pneumocytes and macrophages.  

Expression

RNA: detected in 12 tissues
Protein: detected in 16 cell types
  RNA: detected in 12 tissues
Protein: detected in 23 cell types
  RNA: detected in 12 tissues
Protein: detected in 3 cell types
  RNA: detected in 12 tissues
Protein: detected in 4 cell types
 

Retrieval

HIER pH6   HIER pH6   HIER pH6   HIER pH6  

Antibody dilution

1:200   1:25   1:75   1:150  

Literature conformity

Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.  

RNA consistency

Mainly consistent with RNA expression data.   Mainly consistent with RNA expression data.   Consistent with RNA expression data.   Consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA045280

 

Antibody HPA047236

 

Antibody HPA047744

 

Antibody CAB009591

 

Standard validation

Uncertain

Analysis performed using a standard panel of samples.
No bands detected.
  Uncertain

Analysis performed using a standard panel of samples.
No bands detected.
  Uncertain

Analysis performed using a standard panel of samples.
No bands detected.
  Uncertain

Analysis performed using a standard panel of samples.
No bands detected.
 

       

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 219, 111, 83, 48, 32, 26, 17
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
 

Target mass (kDa)

45.4, 29.1   45.4, 29.1   45.4, 29.1   45.4, 29.1  

Antibody dilution

1:250   1:110   1:80   1:500  

PROTEIN ARRAY

 
 

Antibody HPA045280

 

Antibody HPA047236

 

Antibody HPA047744

 

Antibody CAB009591

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
   

       

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

1:3000   1:900   1:650    

ANTIGEN INFORMATION

 
 

Antibody HPA045280

 

Antibody HPA047236

 

Antibody HPA047744

 

Antibody CAB009591

 

Antigen

Recombinant protein fragment   Recombinant protein fragment   Recombinant protein fragment   Recombinant protein  

Length (aa)

31   36   45    

Antigen sequence

SDPAHYIPPLTFVPVTVPAYWQIHMERVKVG
 
DGILGLGFPILSVEGVRPPLDVLVEQGLLDKPVFSF
 
GTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVF
   

Matching transcripts

NAPSA-001 - ENSP00000253719 [100%]
NAPSA-006 - ENSP00000469061 [100%]
  NAPSA-001 - ENSP00000253719 [97%]
NAPSA-006 - ENSP00000469061 [97%]
  NAPSA-001 - ENSP00000253719 [100%]
NAPSA-006 - ENSP00000469061 [100%]
   

Other gene match

       
ANTIGEN VIEW
NAPSA-001
NAPSA-006
 

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