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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:377.4TPM
GTEx:299.5RPKM
FANTOM5:251.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Glandular cells:High
Myoepithelial cells:High
 

Antibody staining

Antibody HPA042570

 

Antibody CAB037166

 

Antibody CAB037187

 

Antibody CAB037221

 

Adipocytes

High   High   Medium   High  

Glandular cells

High   Medium   Medium   Medium  

Myoepithelial cells

High   Medium   Medium   High  
       
       

BREAST - HPA RNA-seq

Average TPM

377.4

overview Female, age 52
Sample 1
TPM: 432.6
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 430.0
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 416.9
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 229.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

299.5

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 299.5
Samples: 214

Max RPKM: 1334.8
Min RPKM: 93.9
Std RPKM: 171.5
Median RPKM: 257.4
GTEX-1269C-2426-SM-5FQSN 1334.8
GTEX-13FTY-2226-SM-5J1ND 953.3
GTEX-T2IS-1526-SM-32QPR 901.2
GTEX-WYVS-1726-SM-3NMAY 871.0
GTEX-131XW-0726-SM-5EGK3 766.0
GTEX-12ZZX-1126-SM-5EGKB 714.5
GTEX-XMD2-0926-SM-4WWEF 692.8
GTEX-13QIC-2326-SM-5LU5N 673.3
GTEX-11PRG-0826-SM-5EQ6A 624.6
GTEX-VJWN-0726-SM-3GIJ8 623.0
GTEX-U412-1826-SM-4DXTJ 609.3
GTEX-RU72-0626-SM-46MUI 594.6
GTEX-XOT4-0726-SM-4GIAW 592.4
GTEX-WRHU-0326-SM-3MJFY 586.9
GTEX-ZC5H-2626-SM-5J2MG 585.4
GTEX-13FHO-0826-SM-5L3E8 584.9
GTEX-11GS4-2126-SM-5A5KR 581.0
GTEX-11EMC-2026-SM-5A5JV 565.2
GTEX-Q2AG-0326-SM-48U1O 559.7
GTEX-13PL6-2926-SM-5L3I2 556.3
GTEX-X4EP-2926-SM-3P5YQ 544.9
GTEX-131YS-0626-SM-5EGKL 542.0
GTEX-R3RS-0626-SM-48FE1 535.4
GTEX-ZU9S-1926-SM-5NQBP 529.7
GTEX-11EM3-1326-SM-5N9C6 510.3
GTEX-147F4-2826-SM-5NQBN 504.3
GTEX-R55F-1726-SM-2TF4R 485.4
GTEX-Y3IK-2326-SM-4WWDT 473.5
GTEX-X15G-1626-SM-3NMB3 467.6
GTEX-14ABY-2126-SM-5QGQZ 458.7
GTEX-ZVE2-1226-SM-5NQ8R 455.9
GTEX-11WQC-1726-SM-5GU4W 449.0
GTEX-1313W-0826-SM-5EQ4T 446.5
GTEX-13O3O-0826-SM-5K7WE 440.6
GTEX-11P81-1926-SM-5BC53 434.7
GTEX-QEL4-2126-SM-447AE 426.0
GTEX-WYBS-0926-SM-3NM94 413.6
GTEX-146FH-0826-SM-5SI8T 411.7
GTEX-ZTTD-1026-SM-51MRD 402.8
GTEX-QDT8-0626-SM-48TYW 401.4
GTEX-ZF3C-2326-SM-5S2MZ 392.3
GTEX-13OW5-2226-SM-5L3HC 388.3
GTEX-ZAJG-0626-SM-5HL8X 387.5
GTEX-ZVTK-0326-SM-51MRR 385.6
GTEX-ZTX8-1226-SM-4YCE9 384.9
GTEX-13N11-1726-SM-5J1OJ 381.1
GTEX-11EI6-0626-SM-5985T 380.9
GTEX-13W46-0826-SM-5LU3H 378.3
GTEX-T6MN-0726-SM-32PML 376.1
GTEX-13NZB-2126-SM-5MR4Y 372.8
GTEX-UJHI-1426-SM-3DB9C 367.9
GTEX-ZF2S-2026-SM-5E461 367.1
GTEX-14AS3-1626-SM-5S2OY 363.4
GTEX-Y8LW-1626-SM-5IFHX 359.0
GTEX-ZVZQ-0826-SM-51MRF 353.9
GTEX-TML8-1226-SM-32QON 352.4
GTEX-UPK5-2326-SM-3P5Z8 344.4
GTEX-145LT-0726-SM-5S2VM 339.5
GTEX-13O3Q-2226-SM-5KM4O 339.0
GTEX-11TT1-2126-SM-5GU5Y 337.2
GTEX-13PVQ-1026-SM-5KM3M 336.9
GTEX-QEG5-0726-SM-4R1JQ 335.6
GTEX-ZXES-0826-SM-5E43C 335.5
GTEX-111YS-1926-SM-5GICC 335.0
GTEX-11P7K-0726-SM-5EGKX 332.3
GTEX-WYJK-1326-SM-3NB2T 332.2
GTEX-TMMY-0726-SM-33HBE 330.5
GTEX-YFC4-1426-SM-5IFJG 324.4
GTEX-1314G-1226-SM-5BC6D 322.5
GTEX-U3ZH-1426-SM-4DXSR 319.6
GTEX-13NZ8-0126-SM-5IJCT 318.6
GTEX-W5X1-2326-SM-3GIL6 318.0
GTEX-T2YK-2226-SM-32QPT 314.7
GTEX-Y114-2026-SM-4TT7L 313.8
GTEX-ZF29-1926-SM-5S2P1 312.9
GTEX-13O3P-0826-SM-5L3DH 312.7
GTEX-WI4N-1426-SM-3LK7H 308.2
GTEX-XYKS-1326-SM-4BRUN 308.1
GTEX-1192X-2326-SM-5987X 305.9
GTEX-S341-1526-SM-4AD6K 305.6
GTEX-ZVT4-1026-SM-57WC4 304.1
GTEX-11DXW-0626-SM-5N9ER 303.9
GTEX-T5JC-2126-SM-32PMO 300.9
GTEX-133LE-1726-SM-5K7VQ 299.7
GTEX-XMD1-0826-SM-4AT52 295.0
GTEX-ZUA1-1526-SM-59HLS 294.8
GTEX-XUJ4-1926-SM-4BOOV 291.6
GTEX-ZV7C-1826-SM-5NQ83 287.1
GTEX-13OW8-0226-SM-5K7UP 281.8
GTEX-11TUW-1826-SM-5BC5D 281.6
GTEX-S4UY-0726-SM-4AD6X 279.2
GTEX-XBED-1626-SM-47JYN 278.5
GTEX-12WSM-1726-SM-5BC6J 276.6
GTEX-SIU7-1626-SM-4BRUK 274.7
GTEX-13NZ9-1026-SM-5MR5K 273.3
GTEX-Y5V5-2126-SM-4WWFO 272.4
GTEX-S4P3-1326-SM-4AD6V 271.7
GTEX-145MO-0826-SM-5NQBL 268.6
GTEX-X261-0626-SM-3NMD9 266.6
GTEX-132Q8-1426-SM-5EGK7 266.0
GTEX-1399U-1826-SM-5PNZ1 265.5
GTEX-S7SE-0826-SM-4AT4D 264.7
GTEX-13113-1726-SM-5GCOO 264.6
GTEX-XUW1-2326-SM-4BOO5 264.1
GTEX-RWS6-1926-SM-47JXY 260.5
GTEX-ZY6K-1626-SM-5GZWV 260.3
GTEX-Y111-2026-SM-4SOJA 258.5
GTEX-QVJO-1826-SM-447C9 256.3
GTEX-ZLV1-1426-SM-4WWES 256.2
GTEX-ZVT2-1826-SM-5NQ8W 256.0
GTEX-132NY-0826-SM-5K7Y7 255.7
GTEX-11OF3-1926-SM-59889 250.9
GTEX-ZYW4-0826-SM-5GIDG 250.4
GTEX-Y5LM-1726-SM-4VDSX 250.2
GTEX-U3ZN-1926-SM-4DXSG 250.1
GTEX-WOFL-0826-SM-3MJG1 249.1
GTEX-ZYFC-0826-SM-5E44K 249.0
GTEX-ZEX8-2226-SM-57WC6 248.7
GTEX-YJ8O-2226-SM-5IFHW 247.3
GTEX-11LCK-2426-SM-5HL5F 245.5
GTEX-11NV4-2026-SM-5N9DG 241.5
GTEX-1211K-1926-SM-5EQLB 241.3
GTEX-1117F-2826-SM-5GZXL 238.1
GTEX-13W3W-1226-SM-5LU4H 235.4
GTEX-WXYG-2226-SM-4E3IM 234.8
GTEX-145MN-1926-SM-5SIAI 233.5
GTEX-139T8-0826-SM-5L3DE 232.9
GTEX-11GSO-1926-SM-5A5K3 231.5
GTEX-12WSK-2226-SM-5GCO5 229.4
GTEX-XV7Q-2326-SM-4BRVZ 227.4
GTEX-144GM-0926-SM-5O994 227.0
GTEX-11DXY-2326-SM-5GICW 225.0
GTEX-13CF2-2026-SM-5K7VI 223.6
GTEX-12WSB-0626-SM-59HJO 219.6
GTEX-144GL-2026-SM-5LU3O 217.3
GTEX-VUSG-2226-SM-4KKZO 216.1
GTEX-X4XY-0926-SM-4E3JD 212.9
GTEX-117XS-1926-SM-5GICO 211.2
GTEX-SE5C-2126-SM-4BRUJ 209.5
GTEX-14753-2426-SM-5LU8U 207.3
GTEX-139TU-0626-SM-5KM3X 207.1
GTEX-11WQK-2426-SM-5GU5C 204.2
GTEX-Y8E4-1626-SM-5S2MW 202.5
GTEX-T5JW-2026-SM-4DM63 201.5
GTEX-11O72-2126-SM-5N9FO 200.3
GTEX-13N1W-0626-SM-5MR4U 199.7
GTEX-S32W-2026-SM-4AD6E 199.0
GTEX-ZYWO-2326-SM-5GZY4 198.5
GTEX-ZZPU-0626-SM-5E43T 198.3
GTEX-S33H-0326-SM-4AD6N 194.7
GTEX-11ZUS-0826-SM-5FQUY 194.3
GTEX-ZA64-1526-SM-5CVMD 194.2
GTEX-TKQ2-1826-SM-33HB2 193.7
GTEX-U8XE-0826-SM-4E3J1 193.1
GTEX-Y3I4-1526-SM-4TT7K 192.5
GTEX-13D11-1026-SM-5IJFB 191.6
GTEX-ZPIC-1126-SM-5BC7F 190.1
GTEX-ZQUD-1926-SM-51MSA 189.8
GTEX-13O61-1826-SM-5KM4I 188.0
GTEX-11DZ1-0326-SM-5N9BN 186.7
GTEX-ZLFU-2126-SM-4WWEV 184.7
GTEX-T6MO-0326-SM-32QOK 183.7
GTEX-13S86-1226-SM-5S2OA 181.6
GTEX-XQ8I-2426-SM-4WAXY 181.5
GTEX-11DXZ-1926-SM-5GZZL 180.3
GTEX-TKQ1-0226-SM-33HB5 180.2
GTEX-ZYT6-0126-SM-5E45J 180.1
GTEX-S4Q7-1126-SM-4AD6R 179.8
GTEX-R53T-1526-SM-48FEK 178.9
GTEX-RUSQ-2026-SM-4GIAK 176.9
GTEX-ZV6S-1826-SM-5NQ8D 170.9
GTEX-1122O-1226-SM-5H113 168.8
GTEX-12WSN-1326-SM-5GCNT 166.7
GTEX-11ONC-2126-SM-5HL6E 163.3
GTEX-132AR-0826-SM-5EGK6 162.5
GTEX-12BJ1-1826-SM-5HL9N 162.4
GTEX-ZDXO-0126-SM-5S2ND 161.6
GTEX-XMK1-1126-SM-4IHJ8 160.4
GTEX-ZAB4-2526-SM-5HL8M 159.2
GTEX-Y9LG-1426-SM-5IFJZ 158.4
GTEX-ZDTT-2126-SM-5S2OJ 156.0
GTEX-ZWKS-2826-SM-5NQ74 155.4
GTEX-139T6-1626-SM-5PNYZ 155.1
GTEX-12KS4-0126-SM-5Q5A5 153.4
GTEX-REY6-2426-SM-48FF5 151.9
GTEX-13CF3-2126-SM-5IFJP 144.9
GTEX-145ME-1526-SM-5Q5F2 144.6
GTEX-13FTX-1126-SM-5N9EN 141.4
GTEX-YEC3-1026-SM-5IFI5 139.8
GTEX-YB5K-1626-SM-5IFIN 137.2
GTEX-ZDYS-1126-SM-5K7UB 136.7
GTEX-13FTW-1426-SM-5LZWZ 136.5
GTEX-11EQ9-1826-SM-5Q5AJ 136.0
GTEX-XUZC-1626-SM-4BRVP 136.0
GTEX-11NSD-0926-SM-5N9DR 135.2
GTEX-117YX-1426-SM-5H12H 134.5
GTEX-XQ3S-1326-SM-4BOPQ 134.4
GTEX-ZZ64-1226-SM-5E43R 129.9
GTEX-R55D-0826-SM-48FEA 129.6
GTEX-Y5V6-2126-SM-4WWFX 126.7
GTEX-YFCO-1826-SM-4W1YH 126.4
GTEX-WFON-1826-SM-3GILG 124.7
GTEX-11I78-2226-SM-5PNYA 121.3
GTEX-14E6E-1326-SM-5S2NR 119.2
GTEX-YB5E-1726-SM-5IFJ3 118.2
GTEX-PSDG-1626-SM-48TCQ 113.1
GTEX-UTHO-1026-SM-3GAF7 112.2
GTEX-QMRM-1626-SM-4R1KV 109.9
GTEX-ZQG8-0726-SM-5P9H9 107.4
GTEX-11P82-1326-SM-5HL62 106.3
GTEX-WY7C-2726-SM-3NB3P 104.5
GTEX-11ZTT-2326-SM-5EQLG 102.9
GTEX-XGQ4-0926-SM-4AT4U 100.5
GTEX-ZT9W-2026-SM-51MRA 93.9
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

251.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 251.9
FF:10080-102A8 77 years, female 251.9

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