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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:463.0TPM
GTEx:143.1RPKM
FANTOM5:375.0Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA042570

 

Antibody CAB037166

 

Antibody CAB037187

 

Antibody CAB037221

 

Glandular cells

High   High   High   Medium  
       
       
       

SMALL INTESTINE - HPA RNA-seq

Average TPM

463.0

overview Male, age 65
Sample 1
TPM: 386.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 405.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 524.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 536.1

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

143.1

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 143.1
Samples: 88

Max RPKM: 356.8
Min RPKM: 78.6
Std RPKM: 46.6
Median RPKM: 132.5
GTEX-13111-1426-SM-5DUW3 356.8
GTEX-WEY5-1526-SM-4LMJF 299.9
GTEX-ZQUD-0926-SM-57WE3 256.8
GTEX-WRHK-1026-SM-4MVOD 240.9
GTEX-11VI4-1626-SM-5EQKO 227.4
GTEX-13QBU-1926-SM-5IJEW 218.5
GTEX-Y114-1426-SM-4TT6W 208.5
GTEX-111CU-1326-SM-5NQ8L 208.1
GTEX-148VJ-2226-SM-5NQ9M 200.9
GTEX-XMK1-1826-SM-4B66F 199.2
GTEX-XBED-1426-SM-4AT4G 199.1
GTEX-1399U-2126-SM-5IFEZ 194.9
GTEX-WFG8-1626-SM-4LVMB 178.5
GTEX-13O21-1026-SM-5IJDU 178.3
GTEX-11P82-0826-SM-5P9GU 175.9
GTEX-YEC4-1726-SM-4W21E 173.1
GTEX-ZEX8-1826-SM-57WBH 168.2
GTEX-Z9EW-0926-SM-5CVMM 164.9
GTEX-ZTPG-2626-SM-57WFX 164.4
GTEX-Y5LM-1626-SM-4VDTB 163.0
GTEX-14DAR-1426-SM-5RQIR 161.9
GTEX-13FH7-1226-SM-5IJFK 161.7
GTEX-ZVP2-1726-SM-5GU5P 160.5
GTEX-13RTK-0826-SM-5Q5C6 158.2
GTEX-1192X-2526-SM-59868 157.6
GTEX-ZP4G-1626-SM-57WGD 153.6
GTEX-ZPIC-2326-SM-57WDW 152.8
GTEX-Y3IK-1726-SM-4YCCR 152.6
GTEX-12BJ1-1926-SM-5HL9Z 152.1
GTEX-13FTW-2026-SM-5IJE2 151.5
GTEX-12WSK-1526-SM-5CVNO 150.5
GTEX-ZTX8-0526-SM-59HLD 149.4
GTEX-139T6-1026-SM-5IJGC 147.9
GTEX-X15G-1426-SM-4PQZK 147.2
GTEX-13OVI-1926-SM-5IJCG 146.4
GTEX-145LT-1026-SM-5LU9O 145.9
GTEX-13O61-1326-SM-5KM31 142.4
GTEX-11P7K-1626-SM-5GU63 141.8
GTEX-ZVT2-2126-SM-5NQ93 141.8
GTEX-WH7G-1626-SM-4LVMY 141.7
GTEX-ZTSS-0926-SM-59865 140.6
GTEX-117YX-0326-SM-5GICL 140.0
GTEX-WFG7-1726-SM-4LVME 139.6
GTEX-WFJO-0926-SM-4LVM2 133.9
GTEX-13PL7-2626-SM-5IFH4 131.2
GTEX-14E6E-1626-SM-5RQI7 130.6
GTEX-11DXZ-1326-SM-5H11X 130.2
GTEX-ZQG8-2526-SM-57WEQ 129.9
GTEX-13113-1226-SM-5EGHT 126.6
GTEX-131XG-1726-SM-5LZUR 126.3
GTEX-11NSD-1726-SM-5N9C3 124.0
GTEX-XGQ4-1326-SM-4GIDU 123.9
GTEX-ZA64-1226-SM-5HL7B 123.8
GTEX-ZLV1-1126-SM-4WWBW 122.8
GTEX-131XF-1326-SM-5GCMQ 122.1
GTEX-UPK5-2026-SM-4JBIM 121.8
GTEX-ZLFU-1526-SM-4WWBT 121.6
GTEX-145ME-0926-SM-5O9AR 120.4
GTEX-XAJ8-0526-SM-47JYK 117.6
GTEX-ZYFG-2026-SM-5E43Y 116.8
GTEX-ZF2S-1726-SM-57WFT 116.6
GTEX-13CF3-1226-SM-5LZXN 116.4
GTEX-XXEK-1026-SM-4BRUW 115.0
GTEX-YF7O-1826-SM-5IFIU 113.7
GTEX-1122O-1326-SM-5H11F 113.6
GTEX-ZZ64-0526-SM-5GZXM 110.9
GTEX-11DXX-1626-SM-5H11H 110.7
GTEX-ZXES-1526-SM-5NQ95 109.3
GTEX-Y9LG-1626-SM-5IFHM 108.8
GTEX-1399S-2026-SM-5KM4B 108.0
GTEX-11EQ9-1326-SM-5985X 107.5
GTEX-133LE-1426-SM-5IFH1 106.3
GTEX-ZVZP-1826-SM-5GZXB 105.8
GTEX-YB5E-1526-SM-5IFIE 105.3
GTEX-X5EB-1626-SM-4E3IV 103.8
GTEX-13D11-0726-SM-5LZZB 102.8
GTEX-XUZC-1426-SM-4BRV3 101.8
GTEX-139YR-2226-SM-5IFFW 99.2
GTEX-VJYA-0926-SM-4KL1N 98.6
GTEX-11XUK-1426-SM-5EQMG 97.3
GTEX-ZC5H-2326-SM-4WAYT 96.1
GTEX-1399R-2026-SM-5K7WN 93.9
GTEX-111YS-1426-SM-5GID8 92.5
GTEX-ZYWO-1526-SM-5SIAL 88.6
GTEX-11I78-1126-SM-5A5K5 87.5
GTEX-ZPCL-1726-SM-57WEO 83.9
GTEX-WQUQ-2426-SM-4MVNW 80.5
GTEX-VUSG-1726-SM-4KKZL 78.6
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

375.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 375.0
FF:10024-101D6 15,40,85 years, mixed 375.0

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