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SOFT TISSUE - Expression summary

RNA expression
HPA:30.4TPM
GTEx:12.3RPKM
FANTOM5:1.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression
 

Antibody staining

Antibody HPA046392

  

Antibody HPA048743

  

Peripheral nerve

 Not detected   Low  

Fibroblasts

 Not detected  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression
 

Antibody staining

Antibody HPA046392

  

Antibody HPA048743

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

30.4
N/A Female, age 80
Sample 1
TPM: 25.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 23.5
N/A Female, age 57
Sample 3
TPM: 21.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 34.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 46.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

12.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 13.8
Samples: 350

Max RPKM: 23
Min RPKM: 5.6
Std RPKM: 3.3
Median RPKM: 13.6
GTEX-PX3G-0226-SM-3NB2C 23.0
GTEX-14BIL-0226-SM-5SI9E 22.9
GTEX-NFK9-0326-SM-3MJGV 22.6
GTEX-OIZI-0226-SM-2XCEE 22.3
GTEX-SSA3-0226-SM-32QPN 22.1
GTEX-XBEC-0326-SM-4AT4M 21.7
GTEX-T6MN-0226-SM-32PMD 20.9
GTEX-144GL-0226-SM-5QGOX 20.7
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 9.9
Samples: 227

Max RPKM: 19.4
Min RPKM: 3.6
Std RPKM: 2.6
Median RPKM: 9.7
GTEX-ZPU1-1226-SM-5HL71 19.4
GTEX-ZT9X-0926-SM-5O9C4 15.8
GTEX-11ZTS-1326-SM-5EQMA 15.7
GTEX-ZV7C-0826-SM-59HK8 15.7
GTEX-UPK5-1826-SM-3GAEB 15.6
GTEX-13X6I-1526-SM-5SIAC 15.5
GTEX-13FHO-2026-SM-5J1OA 15.4
GTEX-14DAQ-2526-SM-5RQIO 15.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

1.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 1.2
FF:10010-101C1 65,65,76 years, mixed 1.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.