Fields »
ABOUT
HELP
BLOG
YWHAQ

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:145.5TPM
GTEx:81.4RPKM
FANTOM5:152.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
Chondrocytes:Medium
 

Antibody staining

Antibody HPA007925

  

Antibody CAB010286

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 Medium   Low  

Chondrocytes

 Medium  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA007925

  

Antibody CAB010286

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

145.5
N/A Female, age 80
Sample 1
TPM: 147.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 135.7
N/A Female, age 57
Sample 3
TPM: 112.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 168.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 162.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

81.4

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 86.5
Samples: 350

Max RPKM: 136
Min RPKM: 53
Std RPKM: 14.4
Median RPKM: 85.3
GTEX-13G51-2626-SM-5LZYW 136.0
GTEX-TSE9-0226-SM-3DB84 130.2
GTEX-SIU8-0226-SM-2XCDS 128.0
GTEX-13OVL-0326-SM-5IJCS 126.4
GTEX-R55F-1426-SM-2TF53 124.0
GTEX-145LS-0226-SM-5O9A5 120.4
GTEX-OIZI-0226-SM-2XCEE 118.7
GTEX-QDT8-0226-SM-32PL4 118.7
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 73.5
Samples: 227

Max RPKM: 104.2
Min RPKM: 49.4
Std RPKM: 10.4
Median RPKM: 73.5
GTEX-13OVH-1126-SM-5K7YP 104.2
GTEX-13X6H-1726-SM-5Q5EH 100.0
GTEX-13OW7-1126-SM-5K7V6 97.3
GTEX-ZGAY-1326-SM-5S2NS 94.5
GTEX-11PRG-1526-SM-5HL6Z 94.2
GTEX-WFJO-1026-SM-3GIKL 92.4
GTEX-ZE9C-1326-SM-5S2OW 92.1
GTEX-117YX-0726-SM-5GIET 91.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

152.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 152.7
FF:10010-101C1 65,65,76 years, mixed 152.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.