Tissue expression of PRPF38A - Staining in adipose tissue

SOFT TISSUE - Expression summary

RNA expression

HPA:	8.7	TPM
GTEx:	8.3	RPKM
FANTOM5:	31.4	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Antibody staining	Antibody HPA053099	Antibody HPA058407
Adipocytes	Not detected	Not detected
Fibroblasts	Not detected	Not detected
Chondrocytes	Not detected

SOFT TISSUE 2 - Annotated protein expression

Antibody staining	Antibody HPA053099	Antibody HPA058407
Adipocytes	Not detected	Not detected
Fibroblasts	Not detected	Not detected
Peripheral nerve	Not detected	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	8.7

Female, age 80

Sample 1
TPM: 8.1

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 7.4

Female, age 57

Sample 3
TPM: 7.8

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 11.3

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 8.7

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	8.3

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 8.4

Samples: 350

Max RPKM: 15.3
Min RPKM: 4.5
Std RPKM: 1.5
Median RPKM: 8.2

GTEX-POYW-0726-SM-2XCEO

15.3

GTEX-TSE9-0226-SM-3DB84

14.1

GTEX-ZE7O-0226-SM-5S2N1

13.5

GTEX-QEL4-0326-SM-3GAE5

12.7

GTEX-S7SE-0226-SM-2XCD4

12.4

GTEX-13NZ9-0526-SM-5J1OX

12.3

GTEX-OXRO-0226-SM-3LK6F

12.2

GTEX-111FC-0226-SM-5N9B8

11.8

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 8.3

Samples: 227

Max RPKM: 14.1
Min RPKM: 4.5
Std RPKM: 1.9
Median RPKM: 8.1

GTEX-ZAJG-1626-SM-5HL7I

14.1

GTEX-13IVO-2426-SM-5K7V9

14.0

GTEX-13JUV-0626-SM-5J1MQ

13.9

GTEX-14A6H-1026-SM-5SIAZ

12.7

GTEX-1399T-1326-SM-5PNVH

12.3

GTEX-X585-2526-SM-4QAS1

12.3

GTEX-11P7K-0826-SM-5BC5F

12.2

GTEX-ZE7O-1526-SM-5J1NH

12.2

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	31.4

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 31.4

FF:10010-101C1

65,65,76 years, mixed

31.4