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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:268.1TPM
GTEx:248.8RPKM
FANTOM5:1034.7Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA029292

 

Adipocytes

Not detected  

Glandular cells

Medium  

Myoepithelial cells

Medium  
 
 

BREAST - HPA RNA-seq

Average TPM

268.1

overview Female, age 52
Sample 1
TPM: 283.0
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 363.5
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 232.7
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 193.4
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

248.8

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 248.8
Samples: 214

Max RPKM: 438.8
Min RPKM: 123.2
Std RPKM: 54.1
Median RPKM: 243.3
GTEX-145ME-1526-SM-5Q5F2 438.8
GTEX-YEC3-1026-SM-5IFI5 425.2
GTEX-14ABY-2126-SM-5QGQZ 405.7
GTEX-14753-2426-SM-5LU8U 400.9
GTEX-ZQUD-1926-SM-51MSA 384.8
GTEX-11WQC-1726-SM-5GU4W 383.6
GTEX-WFON-1826-SM-3GILG 380.9
GTEX-W5X1-2326-SM-3GIL6 351.7
GTEX-11OF3-1926-SM-59889 348.4
GTEX-YJ8O-2226-SM-5IFHW 341.6
GTEX-ZVT2-1826-SM-5NQ8W 340.9
GTEX-13FTX-1126-SM-5N9EN 339.5
GTEX-PSDG-1626-SM-48TCQ 338.5
GTEX-144GL-2026-SM-5LU3O 337.2
GTEX-VJWN-0726-SM-3GIJ8 336.3
GTEX-Y8E4-1626-SM-5S2MW 334.4
GTEX-12WSM-1726-SM-5BC6J 333.5
GTEX-ZLFU-2126-SM-4WWEV 330.2
GTEX-ZZ64-1226-SM-5E43R 329.8
GTEX-ZQG8-0726-SM-5P9H9 323.9
GTEX-1313W-0826-SM-5EQ4T 322.2
GTEX-12KS4-0126-SM-5Q5A5 319.6
GTEX-11ZTT-2326-SM-5EQLG 319.1
GTEX-ZF3C-2326-SM-5S2MZ 318.1
GTEX-11O72-2126-SM-5N9FO 313.8
GTEX-YB5K-1626-SM-5IFIN 312.8
GTEX-UTHO-1026-SM-3GAF7 312.0
GTEX-11NV4-2026-SM-5N9DG 309.1
GTEX-ZVT4-1026-SM-57WC4 307.8
GTEX-YB5E-1726-SM-5IFJ3 306.1
GTEX-XGQ4-0926-SM-4AT4U 305.3
GTEX-ZVZQ-0826-SM-51MRF 305.3
GTEX-13O61-1826-SM-5KM4I 304.3
GTEX-ZUA1-1526-SM-59HLS 303.6
GTEX-1314G-1226-SM-5BC6D 299.7
GTEX-11ONC-2126-SM-5HL6E 299.3
GTEX-Y9LG-1426-SM-5IFJZ 298.4
GTEX-11DXY-2326-SM-5GICW 298.3
GTEX-145LT-0726-SM-5S2VM 298.1
GTEX-13O3O-0826-SM-5K7WE 296.8
GTEX-ZYT6-0126-SM-5E45J 296.6
GTEX-ZDTT-2126-SM-5S2OJ 295.9
GTEX-S7SE-0826-SM-4AT4D 292.0
GTEX-ZTX8-1226-SM-4YCE9 291.0
GTEX-Y8LW-1626-SM-5IFHX 287.6
GTEX-13OW8-0226-SM-5K7UP 286.5
GTEX-11ZUS-0826-SM-5FQUY 285.4
GTEX-ZAB4-2526-SM-5HL8M 283.9
GTEX-117XS-1926-SM-5GICO 282.7
GTEX-TKQ2-1826-SM-33HB2 282.6
GTEX-14AS3-1626-SM-5S2OY 282.3
GTEX-132NY-0826-SM-5K7Y7 282.1
GTEX-13N11-1726-SM-5J1OJ 281.4
GTEX-T6MO-0326-SM-32QOK 280.5
GTEX-Y114-2026-SM-4TT7L 280.3
GTEX-11DXZ-1926-SM-5GZZL 279.9
GTEX-WYBS-0926-SM-3NM94 279.5
GTEX-R53T-1526-SM-48FEK 277.8
GTEX-ZYFC-0826-SM-5E44K 275.9
GTEX-12WSB-0626-SM-59HJO 274.8
GTEX-11PRG-0826-SM-5EQ6A 273.8
GTEX-ZT9W-2026-SM-51MRA 273.0
GTEX-13QIC-2326-SM-5LU5N 272.8
GTEX-13N1W-0626-SM-5MR4U 272.1
GTEX-TML8-1226-SM-32QON 272.1
GTEX-13OW5-2226-SM-5L3HC 271.8
GTEX-ZF29-1926-SM-5S2P1 269.2
GTEX-XYKS-1326-SM-4BRUN 268.7
GTEX-12BJ1-1826-SM-5HL9N 267.7
GTEX-TMMY-0726-SM-33HBE 266.1
GTEX-R55F-1726-SM-2TF4R 264.0
GTEX-11P7K-0726-SM-5EGKX 263.4
GTEX-ZA64-1526-SM-5CVMD 262.3
GTEX-ZWKS-2826-SM-5NQ74 261.7
GTEX-ZV6S-1826-SM-5NQ8D 260.8
GTEX-S33H-0326-SM-4AD6N 260.6
GTEX-13W46-0826-SM-5LU3H 259.0
GTEX-146FH-0826-SM-5SI8T 259.0
GTEX-ZC5H-2626-SM-5J2MG 258.6
GTEX-ZVTK-0326-SM-51MRR 258.2
GTEX-13FTW-1426-SM-5LZWZ 257.1
GTEX-ZZPU-0626-SM-5E43T 256.9
GTEX-ZPIC-1126-SM-5BC7F 256.5
GTEX-111YS-1926-SM-5GICC 256.1
GTEX-12WSK-2226-SM-5GCO5 256.1
GTEX-13O3Q-2226-SM-5KM4O 255.8
GTEX-ZV7C-1826-SM-5NQ83 255.7
GTEX-131XW-0726-SM-5EGK3 253.7
GTEX-WOFL-0826-SM-3MJG1 252.6
GTEX-Y5LM-1726-SM-4VDSX 252.1
GTEX-145MN-1926-SM-5SIAI 251.8
GTEX-117YX-1426-SM-5H12H 251.7
GTEX-139TU-0626-SM-5KM3X 251.7
GTEX-RWS6-1926-SM-47JXY 251.6
GTEX-131YS-0626-SM-5EGKL 251.4
GTEX-R55D-0826-SM-48FEA 250.2
GTEX-ZTTD-1026-SM-51MRD 249.9
GTEX-T6MN-0726-SM-32PML 249.1
GTEX-Y3I4-1526-SM-4TT7K 248.5
GTEX-S4UY-0726-SM-4AD6X 248.1
GTEX-WXYG-2226-SM-4E3IM 247.7
GTEX-11DXW-0626-SM-5N9ER 247.4
GTEX-ZYWO-2326-SM-5GZY4 247.4
GTEX-147F4-2826-SM-5NQBN 244.4
GTEX-U412-1826-SM-4DXTJ 243.9
GTEX-T2YK-2226-SM-32QPT 243.8
GTEX-ZDXO-0126-SM-5S2ND 243.4
GTEX-ZU9S-1926-SM-5NQBP 243.2
GTEX-Y3IK-2326-SM-4WWDT 242.9
GTEX-ZXES-0826-SM-5E43C 242.6
GTEX-XBED-1626-SM-47JYN 242.5
GTEX-1399U-1826-SM-5PNZ1 240.2
GTEX-11EM3-1326-SM-5N9C6 240.0
GTEX-ZY6K-1626-SM-5GZWV 240.0
GTEX-13NZ9-1026-SM-5MR5K 235.3
GTEX-13NZ8-0126-SM-5IJCT 234.9
GTEX-XQ3S-1326-SM-4BOPQ 234.9
GTEX-13FHO-0826-SM-5L3E8 234.6
GTEX-XMD2-0926-SM-4WWEF 233.9
GTEX-Y111-2026-SM-4SOJA 233.7
GTEX-T2IS-1526-SM-32QPR 233.5
GTEX-WRHU-0326-SM-3MJFY 232.5
GTEX-ZF2S-2026-SM-5E461 232.3
GTEX-Q2AG-0326-SM-48U1O 231.5
GTEX-XUW1-2326-SM-4BOO5 231.4
GTEX-13NZB-2126-SM-5MR4Y 231.1
GTEX-XV7Q-2326-SM-4BRVZ 231.0
GTEX-13PL6-2926-SM-5L3I2 230.2
GTEX-XOT4-0726-SM-4GIAW 230.1
GTEX-11NSD-0926-SM-5N9DR 229.8
GTEX-QEL4-2126-SM-447AE 229.7
GTEX-11GS4-2126-SM-5A5KR 229.5
GTEX-Y5V5-2126-SM-4WWFO 229.3
GTEX-12ZZX-1126-SM-5EGKB 229.1
GTEX-YFCO-1826-SM-4W1YH 229.1
GTEX-1211K-1926-SM-5EQLB 228.5
GTEX-VUSG-2226-SM-4KKZO 226.9
GTEX-14E6E-1326-SM-5S2NR 223.4
GTEX-139T6-1626-SM-5PNYZ 222.9
GTEX-WYVS-1726-SM-3NMAY 222.5
GTEX-13113-1726-SM-5GCOO 221.1
GTEX-11EI6-0626-SM-5985T 220.8
GTEX-13S86-1226-SM-5S2OA 220.4
GTEX-QMRM-1626-SM-4R1KV 220.3
GTEX-S4Q7-1126-SM-4AD6R 219.9
GTEX-ZDYS-1126-SM-5K7UB 219.4
GTEX-ZYW4-0826-SM-5GIDG 218.5
GTEX-UJHI-1426-SM-3DB9C 218.4
GTEX-145MO-0826-SM-5NQBL 218.3
GTEX-WI4N-1426-SM-3LK7H 217.8
GTEX-Y5V6-2126-SM-4WWFX 217.6
GTEX-TKQ1-0226-SM-33HB5 216.3
GTEX-11P81-1926-SM-5BC53 215.8
GTEX-XMK1-1126-SM-4IHJ8 215.7
GTEX-11TT1-2126-SM-5GU5Y 214.3
GTEX-UPK5-2326-SM-3P5Z8 214.0
GTEX-XUJ4-1926-SM-4BOOV 213.8
GTEX-1122O-1226-SM-5H113 213.2
GTEX-U3ZH-1426-SM-4DXSR 213.1
GTEX-SIU7-1626-SM-4BRUK 211.1
GTEX-11GSO-1926-SM-5A5K3 209.8
GTEX-ZLV1-1426-SM-4WWES 209.8
GTEX-T5JC-2126-SM-32PMO 209.2
GTEX-13CF3-2126-SM-5IFJP 209.0
GTEX-QVJO-1826-SM-447C9 206.6
GTEX-1192X-2326-SM-5987X 205.8
GTEX-13CF2-2026-SM-5K7VI 205.3
GTEX-S4P3-1326-SM-4AD6V 205.0
GTEX-13D11-1026-SM-5IJFB 203.9
GTEX-13O3P-0826-SM-5L3DH 201.3
GTEX-13FTY-2226-SM-5J1ND 201.1
GTEX-13PVQ-1026-SM-5KM3M 200.9
GTEX-11WQK-2426-SM-5GU5C 199.4
GTEX-REY6-2426-SM-48FF5 198.4
GTEX-11TUW-1826-SM-5BC5D 198.2
GTEX-1269C-2426-SM-5FQSN 197.4
GTEX-11EQ9-1826-SM-5Q5AJ 196.1
GTEX-QDT8-0626-SM-48TYW 196.0
GTEX-U3ZN-1926-SM-4DXSG 195.9
GTEX-133LE-1726-SM-5K7VQ 194.5
GTEX-X4EP-2926-SM-3P5YQ 194.5
GTEX-R3RS-0626-SM-48FE1 193.2
GTEX-RU72-0626-SM-46MUI 192.9
GTEX-XMD1-0826-SM-4AT52 191.9
GTEX-WYJK-1326-SM-3NB2T 190.6
GTEX-S341-1526-SM-4AD6K 190.5
GTEX-U8XE-0826-SM-4E3J1 189.8
GTEX-SE5C-2126-SM-4BRUJ 189.3
GTEX-YFC4-1426-SM-5IFJG 188.2
GTEX-XQ8I-2426-SM-4WAXY 188.0
GTEX-QEG5-0726-SM-4R1JQ 187.2
GTEX-WY7C-2726-SM-3NB3P 184.9
GTEX-ZAJG-0626-SM-5HL8X 184.4
GTEX-144GM-0926-SM-5O994 184.1
GTEX-X261-0626-SM-3NMD9 183.9
GTEX-132AR-0826-SM-5EGK6 182.1
GTEX-12WSN-1326-SM-5GCNT 181.2
GTEX-11P82-1326-SM-5HL62 181.0
GTEX-11EMC-2026-SM-5A5JV 180.6
GTEX-1117F-2826-SM-5GZXL 179.5
GTEX-ZEX8-2226-SM-57WC6 177.3
GTEX-S32W-2026-SM-4AD6E 177.0
GTEX-ZVE2-1226-SM-5NQ8R 177.0
GTEX-X15G-1626-SM-3NMB3 175.4
GTEX-11I78-2226-SM-5PNYA 173.8
GTEX-11DZ1-0326-SM-5N9BN 173.6
GTEX-T5JW-2026-SM-4DM63 171.9
GTEX-13W3W-1226-SM-5LU4H 169.9
GTEX-X4XY-0926-SM-4E3JD 169.3
GTEX-11LCK-2426-SM-5HL5F 166.6
GTEX-RUSQ-2026-SM-4GIAK 158.7
GTEX-132Q8-1426-SM-5EGK7 151.2
GTEX-139T8-0826-SM-5L3DE 140.4
GTEX-XUZC-1626-SM-4BRVP 123.2
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

1034.7

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 1034.7
FF:10080-102A8 77 years, female 1034.7

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