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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:183.5RPKM
FANTOM5:909.4Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody HPA029292

 

Glial cells

Low  

Neuronal cells

Medium  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

183.5

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 183.5
Samples: 117

Max RPKM: 331.8
Min RPKM: 83.7
Std RPKM: 41.4
Median RPKM: 176
GTEX-12WSA-0011-R5b-SM-5GU5I 331.8
GTEX-T2IS-0011-R5A-SM-32QP4 309.9
GTEX-PVOW-0011-R5A-SM-32PL7 289.2
GTEX-XMD1-0011-R5A-SM-4AT47 276.5
GTEX-P44H-0011-R5A-SM-2XCEX 271.8
GTEX-12WSB-0011-R5b-SM-5GU67 263.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 262.5
GTEX-WWYW-0011-R5A-SM-3NB3E 257.5
GTEX-11H98-0011-R5b-SM-57WCF 247.8
GTEX-QVJO-0011-R5A-SM-2S1QM 242.5
GTEX-QMR6-0011-R5A-SM-32PKT 236.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 234.0
GTEX-12WSF-0011-R5a-SM-5HL8K 224.6
GTEX-139TT-0011-R5b-SM-5K7W8 224.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 223.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 221.8
GTEX-1399T-0011-R5b-SM-5IJDK 220.2
GTEX-13X6I-0011-R5a-SM-5PNWW 218.2
GTEX-13FLV-0011-R5a-SM-5LZWT 218.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 217.9
GTEX-13JVG-0011-R5a-SM-5MR4O 217.0
GTEX-OHPN-0011-R5A-SM-2I5FF 214.0
GTEX-X585-0011-R5A-SM-46MVI 213.9
GTEX-WVLH-0011-R5A-SM-3MJFW 213.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 212.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 212.0
GTEX-T6MN-0011-R5A-SM-32QPD 210.6
GTEX-144GO-0011-R5a-SM-5PNUR 208.0
GTEX-13OW6-0011-R5a-SM-5O9BK 207.6
GTEX-132Q8-0011-R5a-SM-5IJDM 207.5
GTEX-11GSP-0011-R5a-SM-57WBE 206.8
GTEX-N7MT-0011-R5a-SM-2I3G6 206.1
GTEX-13FLW-0011-R5a-SM-5LZX6 205.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 204.2
GTEX-139TS-0011-R5b-SM-5J2MZ 203.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 200.6
GTEX-12ZZX-0011-R5a-SM-5HL89 199.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 199.5
GTEX-13X6K-0011-R5b-SM-5PNUE 197.6
GTEX-13CZV-0011-R5a-SM-5K7XA 195.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 192.2
GTEX-X4XX-0011-R5A-SM-46MWN 190.4
GTEX-NPJ7-0011-R5a-SM-33HBK 188.7
GTEX-WZTO-0011-R5B-SM-3NMC5 188.7
GTEX-11WQC-0011-R5a-SM-5BC74 188.6
GTEX-UTHO-0011-R5A-SM-3GIJD 187.6
GTEX-131YS-0011-R5b-SM-5K7YB 186.3
GTEX-13G51-0011-R5a-SM-5L3EB 186.3
GTEX-145LS-0011-R5a-SM-5SI65 186.0
GTEX-RVPU-0011-R5A-SM-2XCAD 184.0
GTEX-ZUA1-0011-R5b-SM-51MTG 182.9
GTEX-13NYB-0011-R5a-SM-5MR45 180.0
GTEX-ZVT3-0011-R5a-SM-51MSI 179.7
GTEX-YFC4-0011-R5a-SM-4RGLR 179.3
GTEX-13OW7-0011-R5b-SM-5O9DM 178.8
GTEX-S7SE-0011-R5A-SM-2XCDA 178.6
GTEX-NL3H-0011-R5a-SM-2I3GB 178.4
GTEX-X261-0011-R5A-SM-3NMB4 176.1
GTEX-13JUV-0011-R5a-SM-5LZY5 176.0
GTEX-R55E-0011-R5A-SM-2TC5N 175.9
GTEX-14BIM-0011-R5b-SM-5S2RM 174.7
GTEX-ZE7O-0011-R5a-SM-57WBO 173.6
GTEX-13SLX-0011-R5a-SM-5O9BV 173.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 173.0
GTEX-14ABY-0011-R5b-SM-5SI7B 172.5
GTEX-N7MS-0011-R5a-SM-2HMK8 172.4
GTEX-13VXU-0011-R5a-SM-5O9D7 171.3
GTEX-TSE9-0011-R5A-SM-3DB7J 171.3
GTEX-13NYS-0011-R5a-SM-5MR4D 171.2
GTEX-13O3O-0011-R5b-SM-5KM44 171.1
GTEX-13OVL-0011-R5b-SM-5L3FU 170.7
GTEX-14BIN-0011-R5b-SM-5SI78 170.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 170.1
GTEX-13FXS-0011-R5b-SM-5LZYE 169.7
GTEX-RVPV-0011-R5A-SM-2TF69 169.5
GTEX-WL46-0011-R5A-SM-3LK6V 168.8
GTEX-13CIG-0011-R5b-SM-5L3F2 168.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 166.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 163.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 161.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 161.3
GTEX-12WSC-0011-R5b-SM-5CVNS 159.7
GTEX-NL4W-0011-R5a-SM-2I3GD 159.6
GTEX-13OVH-0011-R5b-SM-5KM4L 159.3
GTEX-ZV68-0011-R5a-SM-4YCDW 158.7
GTEX-1445S-0011-R5a-SM-5PNUS 158.3
GTEX-XOTO-0011-R5A-SM-4B657 158.2
GTEX-12WSD-0011-R5b-SM-5CVNG 157.5
GTEX-13OW5-0011-R5b-SM-5L3FR 157.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 155.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 154.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 154.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 154.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 154.5
GTEX-ZXG5-0011-R5b-SM-57WBN 154.2
GTEX-11NV4-0011-R5a-SM-5NQ88 153.3
GTEX-1313W-0011-R5b-SM-5L3EP 150.9
GTEX-RU72-0011-R5A-SM-2TF6U 150.8
GTEX-Z93S-0011-R5b-SM-4RGNI 150.6
GTEX-11OF3-0011-R5a-SM-57WB4 149.3
GTEX-13X6J-0011-R5b-SM-5PNWT 146.2
GTEX-139T8-0011-R5b-SM-5J1MO 145.6
GTEX-OXRN-0011-R5A-SM-2I5EF 144.2
GTEX-145MH-0011-R5a-SM-5P9JT 143.3
GTEX-144GL-0011-R5b-SM-5PNUJ 142.6
GTEX-13S7M-0011-R5b-SM-5P9HS 142.0
GTEX-T5JC-0011-R5A-SM-32PLK 140.5
GTEX-11UD1-0011-R5b-SM-5P9FP 139.0
GTEX-S7PM-0011-R5A-SM-3NM8G 138.4
GTEX-YJ89-0011-R5a-SM-4V6GM 132.7
GTEX-13112-0011-R5b-SM-5DUV8 132.0
GTEX-13FHP-0011-R5b-SM-5LZY2 113.9
GTEX-13CF2-0011-R5a-SM-5LZWS 111.2
GTEX-1477Z-0011-R5b-SM-5PNUO 109.2
GTEX-12WSH-0011-R5b-SM-5P9F3 101.8
GTEX-145MG-0011-R5b-SM-5S2VU 90.1
GTEX-13NZA-0011-R5b-SM-5KM4K 83.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

909.4

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 909.4
FF:10379-105H1 89 years, female 948.2
FF:10164-103B2 76 years, female 870.5

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