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TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:210.4TPM
GTEx:229.9RPKM
FANTOM5:1030.1Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA029292

 

Squamous epithelial cells

Medium  
 
 

ESOPHAGUS - HPA RNA-seq

Average TPM

210.4

overview Female, age 70
Sample 1
TPM: 218.7
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 241.2
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 171.2
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

229.9

GTEx sample id

RPKM

 

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 229.9
Samples: 286

Max RPKM: 340.3
Min RPKM: 119.3
Std RPKM: 43.5
Median RPKM: 223.2
GTEX-145LS-1826-SM-5LUAZ 340.3
GTEX-12KS4-0926-SM-5BC5S 339.4
GTEX-13OVJ-1226-SM-5L3HA 337.3
GTEX-ZF3C-1626-SM-4WWB4 335.5
GTEX-ZT9X-0526-SM-5GCOP 333.9
GTEX-ZVE2-1326-SM-5NQ94 332.4
GTEX-Y8E4-1726-SM-5LU9G 328.7
GTEX-13O3Q-0826-SM-5IFGF 326.8
GTEX-132Q8-1826-SM-5EGIY 325.6
GTEX-XLM4-2326-SM-4TT2D 319.4
GTEX-145ME-0526-SM-5QGQV 317.8
GTEX-144GN-0626-SM-5O9B2 313.7
GTEX-TSE9-1226-SM-4DXTM 313.2
GTEX-YFC4-1226-SM-5LU9R 311.3
GTEX-ZXES-1126-SM-5GZXN 311.2
GTEX-RNOR-1226-SM-48FDQ 310.7
GTEX-11DYG-1326-SM-5N9DO 304.1
GTEX-146FQ-1026-SM-5LU8I 297.3
GTEX-NPJ8-1926-SM-3MJGB 296.8
GTEX-XV7Q-1126-SM-4BRVS 296.7
GTEX-WRHK-0526-SM-4MVOF 296.5
GTEX-WFG7-1126-SM-4LMK3 294.7
GTEX-X585-1226-SM-46MW7 293.7
GTEX-ZYY3-1526-SM-5SIA9 291.7
GTEX-ZZPT-1426-SM-5N9C5 291.3
GTEX-11DZ1-2026-SM-5A5KG 291.2
GTEX-PSDG-1326-SM-48TD2 290.3
GTEX-Y5V6-1026-SM-4VBS2 289.9
GTEX-11EMC-2226-SM-5A5JW 289.2
GTEX-RTLS-1126-SM-46MUQ 289.1
GTEX-1212Z-2126-SM-5FQTM 288.8
GTEX-OXRK-1326-SM-3NB1A 288.4
GTEX-14ICL-0526-SM-5RQJ6 288.2
GTEX-P78B-1026-SM-3NMC4 288.0
GTEX-144FL-2726-SM-5O98Z 287.9
GTEX-13PVQ-1726-SM-5IFF3 287.6
GTEX-RU72-0726-SM-46MUW 286.7
GTEX-OIZI-1426-SM-3NB1T 286.5
GTEX-145MF-1426-SM-5O9B6 285.4
GTEX-139UW-1126-SM-5IJEJ 284.2
GTEX-139TU-1226-SM-5J2NL 284.0
GTEX-ZGAY-1126-SM-4WWBS 283.5
GTEX-X4EO-1226-SM-4QARR 282.4
GTEX-WOFM-0626-SM-4OOS3 279.9
GTEX-12ZZW-1726-SM-5DUVD 279.0
GTEX-ZAB5-0926-SM-5CVMV 278.4
GTEX-146FR-0426-SM-5SI97 278.1
GTEX-145LT-1126-SM-5LUA1 277.7
GTEX-QEL4-1426-SM-447AC 275.5
GTEX-YECK-1626-SM-5IFHQ 275.3
GTEX-WFJO-0826-SM-4LVM5 275.2
GTEX-ZAB4-1126-SM-5HL86 274.2
GTEX-U3ZH-1026-SM-4DXUZ 273.4
GTEX-13CF3-1626-SM-5IFG9 273.3
GTEX-PLZ4-1626-SM-3P618 273.3
GTEX-Y8LW-0726-SM-5IFI1 272.5
GTEX-OXRL-0626-SM-3NM9C 270.9
GTEX-13U4I-1126-SM-5LU3S 270.3
GTEX-R45C-1226-SM-48FEE 269.3
GTEX-T5JC-1726-SM-4DM6U 269.2
GTEX-N7MT-0326-SM-48TDP 268.3
GTEX-S33H-0826-SM-4AD5Y 267.1
GTEX-131XE-1426-SM-5HL7V 265.2
GTEX-13FHO-1726-SM-5IFGM 265.0
GTEX-139YR-1726-SM-5IFFK 264.6
GTEX-PLZ5-0926-SM-3TW8L 264.4
GTEX-13X6I-1026-SM-5LU4C 264.0
GTEX-Y5V5-1626-SM-4VDSG 262.8
GTEX-ZYW4-1326-SM-5E45N 261.5
GTEX-144GO-2726-SM-5O9A2 261.2
GTEX-12WSA-1426-SM-5EGJU 260.8
GTEX-14C38-2126-SM-5RQJO 259.6
GTEX-13D11-1926-SM-5IFGB 259.5
GTEX-145MO-1426-SM-5Q5BS 259.3
GTEX-13O21-0626-SM-5IJDI 259.2
GTEX-12ZZX-1326-SM-5DUWI 259.0
GTEX-1399U-1026-SM-5J1OC 258.7
GTEX-12WSD-1826-SM-5GCOA 256.8
GTEX-ZTX8-0226-SM-5E44D 256.6
GTEX-11XUK-0826-SM-5GU6P 255.7
GTEX-P4QS-0626-SM-3NMD1 255.3
GTEX-13RTK-0526-SM-5S2QF 252.8
GTEX-X15G-0826-SM-4PQZD 252.8
GTEX-13PVR-1826-SM-5Q5CC 252.3
GTEX-ZC5H-1326-SM-5HL7E 251.6
GTEX-Y3IK-1126-SM-51MSV 250.4
GTEX-XMD2-1326-SM-4YCET 250.3
GTEX-SNOS-0626-SM-4DM5F 248.7
GTEX-ZF2S-1226-SM-4WWAX 248.3
GTEX-13W46-1926-SM-5J2MF 247.2
GTEX-ZYT6-1126-SM-5GZYR 246.3
GTEX-13S86-0826-SM-5SI6J 246.2
GTEX-W5WG-1626-SM-4LMKG 246.2
GTEX-WH7G-0926-SM-4LVMJ 245.1
GTEX-144GM-1426-SM-5LU31 244.8
GTEX-145MN-1026-SM-5NQ9G 244.7
GTEX-11P82-0526-SM-5986P 244.0
GTEX-V955-1126-SM-4JBH3 244.0
GTEX-147F3-0826-SM-5NQA7 243.8
GTEX-13111-0826-SM-5LZV3 243.5
GTEX-S7SF-0926-SM-4AD4M 243.0
GTEX-R53T-1126-SM-48FD4 242.6
GTEX-S32W-0926-SM-4AD5X 241.8
GTEX-ZA64-0626-SM-5HL9O 241.7
GTEX-11DXY-1426-SM-5N9CN 241.1
GTEX-P4PP-0626-SM-3NM9X 241.1
GTEX-133LE-0626-SM-5IFFJ 240.7
GTEX-SNMC-0526-SM-4DM69 240.7
GTEX-SUCS-0726-SM-4DM7J 240.4
GTEX-11LCK-1726-SM-5S2OQ 239.2
GTEX-ZT9W-1326-SM-51MTB 239.0
GTEX-13FLV-1126-SM-5J2NO 238.7
GTEX-P4PQ-0626-SM-3NMCU 238.6
GTEX-WK11-1026-SM-4OOS8 237.7
GTEX-11VI4-0526-SM-5EQ48 236.4
GTEX-QV44-1126-SM-4R1KO 236.2
GTEX-YF7O-0926-SM-5IFIF 235.3
GTEX-131XF-0826-SM-5GICG 235.1
GTEX-Y111-1626-SM-57WCY 234.9
GTEX-13G51-0926-SM-5IFFU 234.8
GTEX-ZPU1-1426-SM-4WWFU 234.5
GTEX-U3ZN-1726-SM-4DXUQ 234.2
GTEX-12WSK-1126-SM-5LZV8 234.1
GTEX-Y5LM-1026-SM-4VDSQ 234.0
GTEX-13X6K-2126-SM-5O9D4 232.4
GTEX-XK95-1026-SM-4GIDV 231.6
GTEX-11ZU8-1526-SM-5EGHX 231.2
GTEX-RM2N-0726-SM-48FD5 231.2
GTEX-ZDYS-0826-SM-4WWCR 231.2
GTEX-U4B1-0826-SM-4DXTW 229.7
GTEX-T2IS-0826-SM-4DM6L 229.2
GTEX-QCQG-0626-SM-48U21 229.0
GTEX-YEC3-2526-SM-4YCDN 228.7
GTEX-WQUQ-1626-SM-4OOSH 228.3
GTEX-ZUA1-1226-SM-5NQ6O 228.3
GTEX-13OVI-2626-SM-5KM4T 228.1
GTEX-YJ89-1526-SM-5P9IR 227.1
GTEX-NFK9-1126-SM-3LK78 227.0
GTEX-ZQUD-0426-SM-57WFR 225.7
GTEX-V1D1-1026-SM-4JBHE 224.4
GTEX-U8XE-1726-SM-4E3IF 223.8
GTEX-T8EM-0526-SM-4DM64 223.7
GTEX-OIZH-0626-SM-3NB1L 223.2
GTEX-WVLH-1426-SM-4MVNX 223.1
GTEX-11P7K-1326-SM-5BC5G 222.7
GTEX-OOBK-0625-SM-3LK5P 222.4
GTEX-WEY5-0926-SM-4LMI4 222.2
GTEX-WFON-0826-SM-4LVMI 221.9
GTEX-11I78-1526-SM-5A5K7 221.8
GTEX-12696-1326-SM-5FQTJ 221.5
GTEX-Y114-0926-SM-4TT7J 221.4
GTEX-1399Q-1126-SM-5P9JA 221.3
GTEX-11DXZ-1226-SM-5H11L 220.2
GTEX-14BIN-2726-SM-5RQIE 219.7
GTEX-PWN1-0626-SM-48TDT 219.4
GTEX-1497J-2726-SM-5SI9W 219.3
GTEX-RN64-1026-SM-48FDX 219.2
GTEX-YB5E-0926-SM-4WWDQ 219.0
GTEX-ZLV1-0526-SM-4WWD4 218.1
GTEX-13QBU-1026-SM-5LU3R 217.9
GTEX-XUJ4-1026-SM-4BOPB 217.8
GTEX-UPK5-1226-SM-4IHL8 217.5
GTEX-TKQ1-0326-SM-4DXSM 217.0
GTEX-X3Y1-1326-SM-4PQZB 216.2
GTEX-UJHI-0826-SM-4IHLM 215.9
GTEX-13FTW-1626-SM-5KM4N 214.8
GTEX-13X6H-1326-SM-5LU42 214.4
GTEX-111YS-0926-SM-5EGGI 214.3
GTEX-R3RS-1326-SM-48FE7 214.3
GTEX-13QJ3-1726-SM-5RQK9 214.2
GTEX-13OVG-0626-SM-5IFEP 213.1
GTEX-117YX-1626-SM-5GZZG 212.8
GTEX-R55D-1126-SM-48FEB 212.7
GTEX-S4Q7-0626-SM-4AD5M 212.4
GTEX-145LV-1326-SM-5S2QI 211.1
GTEX-ZYWO-1026-SM-5E45U 211.1
GTEX-ZE9C-1126-SM-4WWBD 210.9
GTEX-XUZC-0426-SM-4BOPE 210.8
GTEX-X62O-2226-SM-46MW3 210.7
GTEX-ZF29-1326-SM-4WWB6 210.3
GTEX-11P81-0826-SM-5P9GR 208.9
GTEX-132AR-2226-SM-5J2NT 208.3
GTEX-XQ3S-1126-SM-4BOPK 208.1
GTEX-PVOW-1626-SM-48TC9 207.9
GTEX-14AS3-0626-SM-5QGQD 207.7
GTEX-11NSD-1126-SM-5N9BQ 207.6
GTEX-ZYVF-2226-SM-5GIDD 207.4
GTEX-13OW8-2326-SM-5L3I9 207.1
GTEX-XMK1-1326-SM-4B65Q 206.7
GTEX-14DAQ-1426-SM-5RQJD 206.6
GTEX-R55E-1326-SM-48FCR 206.6
GTEX-QDVJ-0726-SM-48U1W 205.0
GTEX-QESD-0826-SM-47J4G 204.8
GTEX-X4LF-0626-SM-4QASB 204.7
GTEX-ZTSS-0626-SM-59867 203.5
GTEX-11ZTS-2626-SM-5EGIC 203.2
GTEX-QLQW-0526-SM-4R1KS 203.0
GTEX-RWS6-0826-SM-47JXF 203.0
GTEX-11EM3-0826-SM-5N9CC 201.8
GTEX-1399S-1326-SM-5P9GH 201.7
GTEX-T5JW-1326-SM-4DM5G 201.5
GTEX-139T6-0626-SM-5IFF9 201.1
GTEX-146FH-1726-SM-5QGQ2 200.9
GTEX-T6MO-0526-SM-4DM6R 200.9
GTEX-SE5C-1226-SM-4BRWV 200.6
GTEX-12BJ1-1626-SM-5HL8Y 200.5
GTEX-12C56-1226-SM-5FQSU 199.9
GTEX-VJYA-0726-SM-4KL1T 199.6
GTEX-QEG5-1426-SM-447AS 199.5
GTEX-13W3W-1626-SM-5LU35 199.0
GTEX-XXEK-0326-SM-4BRVV 197.6
GTEX-O5YV-1026-SM-3LK72 197.1
GTEX-R55G-1026-SM-48FDI 196.8
GTEX-TML8-1526-SM-4DXUX 196.7
GTEX-11NUK-1326-SM-5P9GN 195.5
GTEX-12WSL-1526-SM-5GCP8 195.5
GTEX-14A6H-1326-SM-5NQBC 194.8
GTEX-RVPV-0526-SM-47JYL 194.6
GTEX-P4QT-0626-SM-3NMCP 194.4
GTEX-13FTX-0526-SM-5IFGS 194.3
GTEX-XOTO-2126-SM-4B64U 193.9
GTEX-11ONC-1526-SM-5GU6S 193.8
GTEX-S4P3-0426-SM-4AD56 193.7
GTEX-131YS-1426-SM-5IJF7 193.6
GTEX-ZPCL-1426-SM-57WEC 193.3
GTEX-PWCY-0726-SM-48TCS 193.1
GTEX-TMMY-1126-SM-4DXSX 192.9
GTEX-QLQ7-0926-SM-447BC 192.8
GTEX-Z9EW-0526-SM-5HL8S 192.8
GTEX-14E6E-0726-SM-5S2R3 192.7
GTEX-S341-0526-SM-4AD5U 192.6
GTEX-U3ZM-0526-SM-4DXTB 192.6
GTEX-13O1R-1326-SM-5IJF5 191.9
GTEX-XBEW-1326-SM-4AT63 191.9
GTEX-ZVT2-1326-SM-5E45H 190.3
GTEX-REY6-1326-SM-48FDO 190.0
GTEX-XYKS-1526-SM-4BRUP 189.6
GTEX-XQ8I-1526-SM-4BOOH 189.5
GTEX-1122O-1726-SM-5GICM 189.4
GTEX-RUSQ-0826-SM-47JWW 188.8
GTEX-QEG4-0726-SM-4R1JL 188.4
GTEX-XBED-1026-SM-48TCB 188.4
GTEX-13FH7-0526-SM-5IJF8 188.2
GTEX-14H4A-1626-SM-5SI69 187.6
GTEX-QVUS-0626-SM-447CC 187.2
GTEX-13NZB-1226-SM-5J2MW 186.3
GTEX-131XG-1026-SM-5GCMX 185.4
GTEX-QDVN-1026-SM-48TZA 184.9
GTEX-111CU-0726-SM-5GZYD 181.9
GTEX-14E1K-1226-SM-5S2PD 181.7
GTEX-117YW-1926-SM-5H121 181.2
GTEX-Y3I4-1226-SM-4TT8N 180.7
GTEX-PLZ6-0526-SM-3P61C 180.2
GTEX-UJMC-0926-SM-4IHLK 179.8
GTEX-148VJ-1026-SM-5LU98 179.6
GTEX-12ZZY-1426-SM-5N9EI 179.3
GTEX-14BMU-0926-SM-5S2QB 179.1
GTEX-1399R-0826-SM-5IJEL 178.5
GTEX-11GSP-1826-SM-5N9DQ 178.4
GTEX-11TUW-1326-SM-5EQKV 178.3
GTEX-Q2AI-0626-SM-48TZU 178.2
GTEX-ZYFG-1126-SM-5GICY 174.8
GTEX-ZZ64-0226-SM-5E44X 173.4
GTEX-1211K-0926-SM-5FQTL 172.2
GTEX-132QS-1426-SM-5P9GE 171.8
GTEX-OXRN-1726-SM-3NM9B 169.0
GTEX-11DXX-1126-SM-5GZZK 168.6
GTEX-Q2AH-0826-SM-48TZN 167.4
GTEX-R55C-0826-SM-48FCL 167.4
GTEX-UPIC-1026-SM-4IHLT 167.2
GTEX-OIZG-1026-SM-3LK5X 166.7
GTEX-RU1J-0326-SM-46MUM 166.6
GTEX-ZY6K-0626-SM-59HJL 164.4
GTEX-VUSG-1226-SM-4KKZF 163.9
GTEX-11EQ9-0726-SM-5A5K2 163.7
GTEX-WFG8-1226-SM-4V6EI 163.7
GTEX-XGQ4-1526-SM-4AT6H 163.4
GTEX-Y9LG-0626-SM-4WWDH 163.3
GTEX-S95S-0426-SM-4B64I 162.8
GTEX-ZTPG-1626-SM-5DUX2 161.2
GTEX-ZG7Y-1126-SM-4WWEZ 160.8
GTEX-ZVP2-1326-SM-57WCE 158.8
GTEX-11TT1-0526-SM-5P9JO 152.4
GTEX-OXRP-0926-SM-48TC1 145.2
GTEX-S3XE-0926-SM-4AD4S 138.0
GTEX-X4XY-1726-SM-46MVO 119.3
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

1030.1

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 1030.1
FF:10015-101C6 68,74,75 years, mixed 1030.1

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