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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:404.1TPM
GTEx:170.8RPKM
FANTOM5:1744.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA029292

 

Glandular cells

Medium  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

404.1

overview Male, age 65
Sample 1
TPM: 423.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 359.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 426.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 406.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

170.8

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 170.8
Samples: 88

Max RPKM: 249.9
Min RPKM: 110.1
Std RPKM: 32.5
Median RPKM: 167.9
GTEX-1192X-2526-SM-59868 249.9
GTEX-139YR-2226-SM-5IFFW 249.5
GTEX-YEC4-1726-SM-4W21E 249.3
GTEX-13O21-1026-SM-5IJDU 247.1
GTEX-13FTW-2026-SM-5IJE2 223.6
GTEX-XXEK-1026-SM-4BRUW 219.9
GTEX-13PL7-2626-SM-5IFH4 218.8
GTEX-145ME-0926-SM-5O9AR 218.6
GTEX-11P7K-1626-SM-5GU63 218.1
GTEX-ZTX8-0526-SM-59HLD 215.8
GTEX-ZTPG-2626-SM-57WFX 213.1
GTEX-13RTK-0826-SM-5Q5C6 207.2
GTEX-WRHK-1026-SM-4MVOD 200.8
GTEX-145LT-1026-SM-5LU9O 200.4
GTEX-X5EB-1626-SM-4E3IV 199.2
GTEX-ZVT2-2126-SM-5NQ93 197.7
GTEX-13OVI-1926-SM-5IJCG 196.2
GTEX-Y3IK-1726-SM-4YCCR 195.8
GTEX-14DAR-1426-SM-5RQIR 195.7
GTEX-ZXES-1526-SM-5NQ95 194.0
GTEX-148VJ-2226-SM-5NQ9M 193.9
GTEX-13QBU-1926-SM-5IJEW 192.7
GTEX-13113-1226-SM-5EGHT 192.4
GTEX-ZQG8-2526-SM-57WEQ 191.0
GTEX-Y5LM-1626-SM-4VDTB 190.9
GTEX-YB5E-1526-SM-5IFIE 187.1
GTEX-11EQ9-1326-SM-5985X 185.4
GTEX-Y9LG-1626-SM-5IFHM 184.2
GTEX-ZLV1-1126-SM-4WWBW 184.1
GTEX-ZYWO-1526-SM-5SIAL 183.4
GTEX-ZPIC-2326-SM-57WDW 182.9
GTEX-WFJO-0926-SM-4LVM2 182.9
GTEX-ZYFG-2026-SM-5E43Y 182.7
GTEX-13D11-0726-SM-5LZZB 182.5
GTEX-ZQUD-0926-SM-57WE3 181.6
GTEX-VJYA-0926-SM-4KL1N 181.2
GTEX-ZZ64-0526-SM-5GZXM 179.7
GTEX-XGQ4-1326-SM-4GIDU 178.8
GTEX-WFG7-1726-SM-4LVME 176.9
GTEX-14E6E-1626-SM-5RQI7 176.1
GTEX-ZVP2-1726-SM-5GU5P 175.8
GTEX-ZLFU-1526-SM-4WWBT 174.8
GTEX-11NSD-1726-SM-5N9C3 174.0
GTEX-12WSK-1526-SM-5CVNO 169.6
GTEX-1399S-2026-SM-5KM4B 166.2
GTEX-XBED-1426-SM-4AT4G 166.0
GTEX-11P82-0826-SM-5P9GU 165.4
GTEX-Z9EW-0926-SM-5CVMM 164.0
GTEX-13FH7-1226-SM-5IJFK 163.4
GTEX-ZA64-1226-SM-5HL7B 163.0
GTEX-139T6-1026-SM-5IJGC 163.0
GTEX-131XF-1326-SM-5GCMQ 162.9
GTEX-13O61-1326-SM-5KM31 161.5
GTEX-11DXZ-1326-SM-5H11X 154.2
GTEX-ZP4G-1626-SM-57WGD 153.9
GTEX-1399U-2126-SM-5IFEZ 153.6
GTEX-ZVZP-1826-SM-5GZXB 152.9
GTEX-11XUK-1426-SM-5EQMG 152.2
GTEX-111YS-1426-SM-5GID8 151.2
GTEX-11DXX-1626-SM-5H11H 150.4
GTEX-XAJ8-0526-SM-47JYK 149.5
GTEX-ZF2S-1726-SM-57WFT 148.7
GTEX-ZPCL-1726-SM-57WEO 148.4
GTEX-Y114-1426-SM-4TT6W 148.1
GTEX-1122O-1326-SM-5H11F 147.2
GTEX-131XG-1726-SM-5LZUR 146.8
GTEX-12BJ1-1926-SM-5HL9Z 146.2
GTEX-13111-1426-SM-5DUW3 145.6
GTEX-WFG8-1626-SM-4LVMB 144.9
GTEX-1399R-2026-SM-5K7WN 143.5
GTEX-XUZC-1426-SM-4BRV3 143.3
GTEX-ZEX8-1826-SM-57WBH 139.4
GTEX-ZTSS-0926-SM-59865 137.2
GTEX-WH7G-1626-SM-4LVMY 136.8
GTEX-VUSG-1726-SM-4KKZL 136.2
GTEX-133LE-1426-SM-5IFH1 135.6
GTEX-XMK1-1826-SM-4B66F 133.7
GTEX-117YX-0326-SM-5GICL 133.6
GTEX-X15G-1426-SM-4PQZK 133.5
GTEX-ZC5H-2326-SM-4WAYT 133.0
GTEX-11VI4-1626-SM-5EQKO 132.2
GTEX-13CF3-1226-SM-5LZXN 127.1
GTEX-WEY5-1526-SM-4LMJF 125.4
GTEX-111CU-1326-SM-5NQ8L 123.7
GTEX-11I78-1126-SM-5A5K5 118.5
GTEX-WQUQ-2426-SM-4MVNW 113.5
GTEX-UPK5-2026-SM-4JBIM 112.9
GTEX-YF7O-1826-SM-5IFIU 110.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

1744.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 1744.9
FF:10024-101D6 15,40,85 years, mixed 1744.9

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