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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA008965

 

Antibody CAB009445

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Santa Cruz Biotechnology
 

Product name

HPA008965   sc-20628  

Host species

Rabbit   Rabbit  

Clonality

pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Protein A/G  

Other gene match

   

Released in version

3   3  

References

   

VALIDATION SUMMARY

 
 

Antibody HPA008965

 

Antibody CAB009445

 
Immunocytochemistry

  Uncertain  
Immunohistochemistry

Supported   Supported  
Western blot

Supported   Uncertain  
Protein array

Approved    

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA008965

 

Antibody CAB009445

 

Standard validation

  Uncertain  

   

Figure description

  Immunofluorescent staining of human cell line U-2 OS shows localization to cytosol & vesicles.  

Antibody dilution

  1:200  

Literature conformity

  The subcellular location is not consistent with literature.  

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA008965

 

Antibody CAB009445

 

Standard validation

Supported   Supported  

   

Figure description

Immunohistochemical staining of human colon shows strong immunoreactivity in erythrocytes present in blood vessel and moderate cytoplasmic positivity in glandular cells.   Immunohistochemical staining of human fallopian tube shows selective positivity in erythrocytes.  

Expression

RNA: detected in 37 tissues
Protein: detected in 61 cell types
  RNA: detected in 37 tissues
Protein: detected in 42 cell types
 

Retrieval

HIER pH6   HIER pH6  

Antibody dilution

1:10   1:200  

Literature conformity

Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.  

RNA consistency

Mainly consistent with RNA expression data.   Mainly consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA008965

 

Antibody CAB009445

 

Standard validation

Supported

Band of predicted size in kDa (+/-20%) with additional bands present.
  Uncertain

Analysis performed using a standard panel of samples.
Only bands not corresponding to the predicted size.
 

   

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: Negative control (vector only transfected HEK293T lysate)
Lane 3: Over-expression Lysate (Co-expressed with a C-terminal myc-DDK tag (~3.1 kDa) in mammalian HEK293T cells, LY419537)
   

Target mass (kDa)

13.8, 11.9, 11.5   13.8, 11.9, 11.5  

Antibody dilution

1:250   1:500  

PROTEIN ARRAY

 
 

Antibody HPA008965

 

Antibody CAB009445

 

Standard validation

Approved

Pass with quality comment low specificity (binding to 1-2 PrESTs >15% and <40%).
   

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

1:500    

ANTIGEN INFORMATION

 
 

Antibody HPA008965

 

Antibody CAB009445

 

Antigen

Recombinant protein fragment   Recombinant protein  

Length (aa)

47    

Antigen sequence

RYMYRHKGTYHTNEAKGTEFAESADAALQGDPALQDAGDSSRKEYFI
   

Matching transcripts

GYPC-001 - ENSP00000259254 [100%]
GYPC-002 - ENSP00000386904 [100%]
GYPC-201 - ENSP00000349354 [100%]
   

Other gene match

   
ANTIGEN VIEW
GYPC-001
GYPC-002
GYPC-201
 

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.