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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:18.8TPM
GTEx:6.4RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA019684

 

Antibody CAB034423

 

Endothelial cells

Not detected   Not detected  

Glial cells

Not detected   Not detected  

Neuronal cells

Not detected   Not detected  

Neuropil

Not detected   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

18.8

N/A Male, age 5
Sample 1
TPM: 30.2
overview Female, age 40
Sample 2
TPM: 6.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 20.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

6.4

GTEx sample id

RPKM

3.35.06.41.09.10510152025303540
 
3.35.06.41.09.10510152025303540

Brain - Cortex

Brain - Cortex
RPKM: 5.7
Samples: 114

Max RPKM: 43.3
Min RPKM: 1
Std RPKM: 4.6
Median RPKM: 5.1
GTEX-WZTO-2926-SM-3NM9I 43.3
GTEX-13JVG-3126-SM-5L3FH 22.4
GTEX-11DXY-3226-SM-5GIDE 16.3
GTEX-145LS-3126-SM-5Q5BY 14.1
GTEX-14ASI-3026-SM-5S2PN 12.4
GTEX-PVOW-2526-SM-2XCF7 11.6
GTEX-WVLH-3026-SM-3MJG9 9.1
GTEX-11WQK-3026-SM-5EQL6 8.8
GTEX-12ZZZ-3026-SM-5BC67 8.7
GTEX-13FLW-1426-SM-5K7YE 8.7
GTEX-TSE9-3026-SM-3DB76 8.7
GTEX-T5JC-2426-SM-3NMDB 8.6
GTEX-12126-1026-SM-5P9JJ 8.5
GTEX-WL46-2926-SM-3LK82 8.2
GTEX-145MH-3026-SM-5Q5DZ 8.0
GTEX-WHSE-3026-SM-3P5ZH 8.0
GTEX-Z93S-2926-SM-57WB9 7.8
GTEX-13FHO-3026-SM-5J1O9 7.7
GTEX-13VXU-2926-SM-5LU5C 7.6
GTEX-T2IS-3026-SM-32QPM 7.4
GTEX-QMR6-1426-SM-32PLA 7.2
GTEX-T6MN-2626-SM-32PMQ 7.1
GTEX-11PRG-2926-SM-5987A 7.0
GTEX-11ZUS-2926-SM-5FQSL 7.0
GTEX-12ZZX-2926-SM-5GCOQ 6.8
GTEX-Y8DK-0826-SM-4TT3T 6.8
GTEX-13SLX-3126-SM-5S2Q5 6.6
GTEX-YFC4-3126-SM-5PNV6 6.6
GTEX-11ONC-2926-SM-5P9JM 6.4
GTEX-14BMV-3026-SM-5S2PQ 6.4
GTEX-ZAK1-3026-SM-5S2MJ 6.4
GTEX-XOTO-3026-SM-4B65M 6.3
GTEX-13OVH-3026-SM-5MR4N 6.2
GTEX-X4XX-3026-SM-3NMB2 6.2
GTEX-13O3Q-2926-SM-5KM45 6.1
GTEX-UTHO-3026-SM-3GAFB 6.1
GTEX-13OW6-3026-SM-5J2MI 6.0
GTEX-13X6J-3026-SM-5Q5CU 6.0
GTEX-ZYFD-3026-SM-5E44C 6.0
GTEX-11NUK-2926-SM-5A5MD 5.9
GTEX-13PL6-3126-SM-5LUAR 5.9
GTEX-ZVT3-3026-SM-5E43N 5.9
GTEX-1313W-3126-SM-5LZUI 5.8
GTEX-QDT8-2926-SM-32PKC 5.8
GTEX-NPJ8-1526-SM-2D7VU 5.7
GTEX-RNOR-2326-SM-2TF4I 5.7
GTEX-13FHP-3026-SM-5IJBS 5.6
GTEX-YJ89-3026-SM-5IFJI 5.6
GTEX-ZUA1-3026-SM-59HJC 5.6
GTEX-NPJ7-2726-SM-2I3FT 5.5
GTEX-11DXW-1126-SM-5H12Q 5.4
GTEX-12WSC-3026-SM-5GCNF 5.4
GTEX-131YS-3126-SM-5KLYT 5.4
GTEX-WWYW-3126-SM-3NB39 5.4
GTEX-144GL-3026-SM-5Q5CW 5.2
GTEX-145MF-2726-SM-5O995 5.2
GTEX-117XS-3026-SM-5N9CA 5.1
GTEX-145MG-3026-SM-5RQJA 5.0
GTEX-QVJO-1426-SM-2S1QY 5.0
GTEX-Y111-2726-SM-4TT3N 5.0
GTEX-1399T-3026-SM-5KLZC 4.9
GTEX-111FC-3126-SM-5GZZ2 4.8
GTEX-13O3O-3126-SM-5KM3H 4.8
GTEX-X585-3026-SM-46MWF 4.7
GTEX-R55F-1326-SM-5S2V4 4.6
GTEX-13IVO-2926-SM-5L3CZ 4.5
GTEX-1128S-2726-SM-5H12C 4.4
GTEX-13FXS-3126-SM-5J2NN 4.4
GTEX-XLM4-3026-SM-4AT6L 4.3
GTEX-11GSO-2926-SM-5HL73 4.2
GTEX-12WSH-3026-SM-5CVNI 4.1
GTEX-13OW8-2826-SM-5L3GC 4.1
GTEX-13QIC-2926-SM-5J2NF 4.0
GTEX-1192X-3126-SM-5N9BY 3.9
GTEX-Q2AG-2926-SM-2HMJ3 3.9
GTEX-13NYB-3026-SM-5IJD7 3.8
GTEX-12ZZY-3026-SM-5GCOU 3.6
GTEX-13NYC-2826-SM-5K7WR 3.6
GTEX-OXRN-2426-SM-2I5EQ 3.6
GTEX-RU72-3026-SM-5SI7Y 3.6
GTEX-11EI6-3026-SM-5GZZO 3.4
GTEX-14A5I-2926-SM-5Q5CQ 3.4
GTEX-11GS4-3126-SM-5A5LH 3.3
GTEX-13NYS-3126-SM-5KLYV 3.3
GTEX-144FL-3026-SM-5O99C 3.3
GTEX-ZAJG-3126-SM-5HL9J 3.3
GTEX-13OW7-3026-SM-5L3GY 3.2
GTEX-12ZZW-2926-SM-5LZUP 3.1
GTEX-131XW-3126-SM-5LZUC 3.1
GTEX-132Q8-3026-SM-5PNVG 3.1
GTEX-11NV4-2126-SM-5N9DS 3.0
GTEX-12WSD-3126-SM-5HL7P 3.0
GTEX-QVUS-2826-SM-3GADB 3.0
GTEX-13OVJ-2826-SM-5L3GW 2.7
GTEX-13S7M-3126-SM-5RQJQ 2.7
GTEX-ZE7O-3126-SM-5HL5X 2.7
GTEX-139T8-1026-SM-5J2MC 2.6
GTEX-13JUV-2926-SM-5LZX7 2.6
GTEX-147GR-3026-SM-5S2ML 2.6
GTEX-11EMC-3226-SM-5EGKW 2.5
GTEX-11O72-2926-SM-5BC4V 2.5
GTEX-1117F-3226-SM-5N9CT 2.4
GTEX-13PVQ-3026-SM-5SI93 2.4
GTEX-11GSP-3226-SM-5986O 2.2
GTEX-11OC5-0726-SM-5P9JK 2.2
GTEX-13G51-3026-SM-5IJB8 2.2
GTEX-13X6K-2926-SM-5Q5D5 2.2
GTEX-PWO3-0926-SM-2I5EY 2.2
GTEX-ZZPT-3026-SM-5GZXH 2.2
GTEX-11OF3-2926-SM-5HL78 1.6
GTEX-N7MT-1126-SM-5SI7V 1.2
GTEX-11TTK-2926-SM-5PNYP 1.1
GTEX-12WSA-2926-SM-5EQ4D 1.0
GTEX-1445S-3026-SM-5O9BR 1.0
Show all
4.87.09.20.514.90246810121416
 
4.87.09.20.514.90246810121416

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 7.2
Samples: 108

Max RPKM: 17
Min RPKM: 0.5
Std RPKM: 3.4
Median RPKM: 7
GTEX-11ZUS-0011-R10b-SM-5BC79 17.0
GTEX-WVLH-0011-R10A-SM-3MJFM 14.9
GTEX-WZTO-0011-R10B-SM-4E3KB 13.5
GTEX-T5JC-0011-R10A-SM-32PM2 13.4
GTEX-QDT8-0011-R10A-SM-32PKG 13.2
GTEX-YFC4-0011-R10a-SM-4SOK5 13.2
GTEX-145MH-0011-R10b-SM-5PNUK 13.0
GTEX-WL46-0011-R10A-SM-3MJFQ 12.9
GTEX-12WSE-0011-R10b-SM-5P9JV 12.8
GTEX-NL3H-0011-R10A-SM-2I3E9 12.7
GTEX-Z93S-0011-R10a-SM-4RGNM 12.6
GTEX-T6MN-0011-R10A-SM-32QP7 12.1
GTEX-131XH-0011-R10a-SM-5EGLJ 12.0
GTEX-1313W-0011-R10b-SM-5DUXA 11.8
GTEX-12ZZX-0011-R10b-SM-5DUWK 11.7
GTEX-12WSC-0011-R10a-SM-5GU57 11.5
GTEX-X4EP-0011-R10B-SM-4QASJ 11.0
GTEX-131YS-0011-R10b-SM-5EQ5N 10.2
GTEX-145LS-0011-R10a-SM-5PNUQ 10.2
GTEX-145MG-0011-R10a-SM-5PNWG 10.2
GTEX-13O3Q-0011-R10b-SM-5KM39 10.1
GTEX-13FHO-0011-R10b-SM-5J2MM 10.0
GTEX-Q2AG-0011-R10A-SM-2HMLA 9.8
GTEX-NPJ8-0011-R10A-SM-2YUMO 9.5
GTEX-14BIN-0011-R10a-SM-5S2UA 9.4
GTEX-13X6J-0011-R10b-SM-5PNWA 9.3
GTEX-S7SE-0011-R10A-SM-2XCDF 9.3
GTEX-12WSM-0011-R10a-SM-5DUWV 9.2
GTEX-ZVZQ-0011-R10b-SM-51MRT 9.1
GTEX-13N2G-0011-R10a-SM-5MR34 9.0
GTEX-YJ89-0011-R10a-SM-4SOK9 9.0
GTEX-13X6K-0011-R10a-SM-5P9JR 8.9
GTEX-X4XX-0011-R10B-SM-46MWO 8.8
GTEX-13FLW-0011-R10b-SM-5LZZF 8.7
GTEX-13OVL-0011-R10a-SM-5L3GS 8.7
GTEX-N7MS-0011-R10A-SM-2HMJK 8.6
GTEX-13X6I-0011-R10a-SM-5PNWI 8.4
GTEX-WWYW-0011-R10A-SM-3NB35 8.4
GTEX-X585-0011-R10A-SM-46MUY 8.3
GTEX-13N1W-0011-R10b-SM-5MR4H 8.2
GTEX-QVJO-0011-R10A-SM-2S1QJ 8.2
GTEX-147GR-0011-R10b-SM-5S2UM 8.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 8.1
GTEX-13QIC-0011-R10a-SM-5O9C7 8.0
GTEX-14ASI-0011-R10b-SM-5S2VZ 8.0
GTEX-11WQK-0011-R10a-SM-5BC6R 7.9
GTEX-13NYB-0011-R10a-SM-5KM43 7.9
GTEX-12ZZY-0011-R10b-SM-5HL7W 7.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC 7.7
GTEX-13FTZ-0011-R10b-SM-5KLZS 7.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 7.4
GTEX-13S7M-0011-R10b-SM-5PNZB 7.3
GTEX-13SLX-0011-R10a-SM-5P9HV 7.2
GTEX-12WSF-0011-R10a-SM-5LZVH 7.1
GTEX-QVUS-0011-R10A-SM-3GIK3 6.9
GTEX-12126-0011-R10b-SM-5BC6T 6.8
GTEX-12WSH-0011-R10a-SM-5LZUS 6.8
GTEX-QMR6-0011-R10A-SM-32PKO 6.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 6.7
GTEX-ZUA1-0011-R10a-SM-51MT6 6.7
GTEX-13CZV-0011-R10b-SM-5LZYD 6.4
GTEX-ZF28-0011-R10a-SM-4WWEH 6.4
GTEX-13FXS-0011-R10a-SM-5J2MA 6.3
GTEX-N7MT-0011-R10A-SM-2I3E1 6.3
GTEX-XLM4-0011-R10A-SM-4AT5P 6.3
GTEX-13OW7-0011-R10a-SM-5L3H3 6.2
GTEX-ZAB4-0011-R10a-SM-4SOKH 6.2
GTEX-13O3O-0011-R10a-SM-5LUA9 6.1
GTEX-11H98-0011-R10b-SM-5NQ98 6.0
GTEX-14BIL-0011-R10a-SM-5SI75 6.0
GTEX-P44H-0011-R10A-SM-2XCEK 6.0
GTEX-ZVT3-0011-R10b-SM-57WB6 6.0
GTEX-OXRN-0011-R10A-SM-2I5GC 5.7
GTEX-TSE9-0011-R10A-SM-3DB7O 5.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 5.4
GTEX-145LU-0011-R10a-SM-5PNWJ 5.4
GTEX-13G51-0011-R10b-SM-5LZYF 5.2
GTEX-ZDXO-0011-R10a-SM-4WWD8 5.1
GTEX-13FLV-0011-R10b-SM-5LZZ2 5.0
GTEX-13OW6-0011-R10a-SM-5L3HE 4.9
GTEX-OXRO-0011-R10A-SM-2I5EH 4.8
GTEX-13OW8-0011-R10a-SM-5L3H6 4.6
GTEX-13QJC-0011-R10a-SM-5SI63 4.4
GTEX-139TS-0011-R10a-SM-5K7TU 4.1
GTEX-X261-0011-R10B-SM-4E3JT 4.1
GTEX-13IVO-0011-R10a-SM-5LZY3 4.0
GTEX-13NYS-0011-R10a-SM-5MR4S 4.0
GTEX-147F4-0011-R10b-SM-5S2WC 3.9
GTEX-13JUV-0011-R10b-SM-5LZXR 3.8
GTEX-ZXG5-0011-R10a-SM-57WDD 3.4
GTEX-11WQC-0011-R10a-SM-57WCT 3.0
GTEX-13NZA-0011-R10b-SM-5KM54 2.9
GTEX-13SLW-0011-R10a-SM-5S2UI 2.9
GTEX-NL4W-0011-R10A-SM-2I3DY 2.9
GTEX-12ZZW-0011-R10b-SM-5HL9X 2.8
GTEX-12WSD-0011-R10b-SM-5GU79 2.7
GTEX-RVPU-0011-R10A-SM-2XCAH 2.7
GTEX-ZV68-0011-R10a-SM-51MT7 2.5
GTEX-11GSP-0011-R10a-SM-5NQ7J 2.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 2.1
GTEX-12WSA-0011-R10b-SM-5P9ET 1.7
GTEX-13JVG-0011-R10b-SM-5KM2P 1.7
GTEX-XMD1-0011-R10A-SM-4AT4A 1.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 1.6
GTEX-14753-0011-R10b-SM-5S2WE 1.4
GTEX-131XW-0011-R10a-SM-5DUVA 1.2
GTEX-1477Z-0011-R10b-SM-5S2RF 1.1
GTEX-1445S-0011-R10a-SM-5PNWB 0.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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