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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:33.4TPM
GTEx:11.9RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Medium
Neuronal cells:Not detected
Neuropil:Low
 

Antibody staining

Antibody HPA004748

 

Antibody CAB002006

 

Endothelial cells

Medium   Medium  

Glial cells

Medium   High  

Neuronal cells

Not detected   Not detected  

Neuropil

Low   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

33.4

N/A Male, age 5
Sample 1
TPM: 28.5
overview Female, age 40
Sample 2
TPM: 35.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 35.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

11.9

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 13.5
Samples: 114

Max RPKM: 28
Min RPKM: 5.9
Std RPKM: 4.5
Median RPKM: 12.3
GTEX-13JVG-3126-SM-5L3FH 28.0
GTEX-WZTO-2926-SM-3NM9I 27.6
GTEX-144FL-3026-SM-5O99C 25.4
GTEX-NPJ8-1526-SM-2D7VU 24.6
GTEX-13OVJ-2826-SM-5L3GW 23.8
GTEX-ZZPT-3026-SM-5GZXH 23.8
GTEX-13IVO-2926-SM-5L3CZ 21.7
GTEX-X585-3026-SM-46MWF 21.6
GTEX-N7MT-1126-SM-5SI7V 21.1
GTEX-1192X-3126-SM-5N9BY 20.6
GTEX-12WSA-2926-SM-5EQ4D 20.5
GTEX-132Q8-3026-SM-5PNVG 20.5
GTEX-11ONC-2926-SM-5P9JM 19.8
GTEX-13G51-3026-SM-5IJB8 19.5
GTEX-1445S-3026-SM-5O9BR 19.3
GTEX-139T8-1026-SM-5J2MC 19.1
GTEX-13JUV-2926-SM-5LZX7 18.7
GTEX-11GSP-3226-SM-5986O 18.5
GTEX-11OF3-2926-SM-5HL78 18.3
GTEX-13NYS-3126-SM-5KLYV 18.0
GTEX-NPJ7-2726-SM-2I3FT 18.0
GTEX-PWO3-0926-SM-2I5EY 18.0
GTEX-13PVQ-3026-SM-5SI93 17.5
GTEX-QVUS-2826-SM-3GADB 17.5
GTEX-11TTK-2926-SM-5PNYP 17.1
GTEX-11EMC-3226-SM-5EGKW 16.6
GTEX-12ZZY-3026-SM-5GCOU 16.2
GTEX-11WQK-3026-SM-5EQL6 16.1
GTEX-12WSD-3126-SM-5HL7P 15.8
GTEX-1399T-3026-SM-5KLZC 15.7
GTEX-13QIC-2926-SM-5J2NF 15.5
GTEX-13X6K-2926-SM-5Q5D5 15.5
GTEX-13OW8-2826-SM-5L3GC 15.2
GTEX-13S7M-3126-SM-5RQJQ 15.1
GTEX-11GS4-3126-SM-5A5LH 14.8
GTEX-QVJO-1426-SM-2S1QY 14.8
GTEX-12ZZW-2926-SM-5LZUP 14.7
GTEX-1117F-3226-SM-5N9CT 13.9
GTEX-11OC5-0726-SM-5P9JK 13.9
GTEX-13OW7-3026-SM-5L3GY 13.8
GTEX-11EI6-3026-SM-5GZZO 13.7
GTEX-12ZZZ-3026-SM-5BC67 13.6
GTEX-Q2AG-2926-SM-2HMJ3 13.6
GTEX-ZAJG-3126-SM-5HL9J 13.6
GTEX-ZVT3-3026-SM-5E43N 13.6
GTEX-11O72-2926-SM-5BC4V 13.5
GTEX-13FHP-3026-SM-5IJBS 13.5
GTEX-X4XX-3026-SM-3NMB2 13.5
GTEX-11GSO-2926-SM-5HL73 13.4
GTEX-145LS-3126-SM-5Q5BY 13.3
GTEX-OXRN-2426-SM-2I5EQ 13.0
GTEX-1128S-2726-SM-5H12C 12.9
GTEX-111FC-3126-SM-5GZZ2 12.8
GTEX-R55F-1326-SM-5S2V4 12.7
GTEX-131XW-3126-SM-5LZUC 12.4
GTEX-12126-1026-SM-5P9JJ 12.3
GTEX-145MF-2726-SM-5O995 12.3
GTEX-14A5I-2926-SM-5Q5CQ 12.3
GTEX-QDT8-2926-SM-32PKC 12.2
GTEX-13FHO-3026-SM-5J1O9 12.1
GTEX-13FXS-3126-SM-5J2NN 12.1
GTEX-13NYC-2826-SM-5K7WR 12.1
GTEX-13OW6-3026-SM-5J2MI 12.0
GTEX-11DXY-3226-SM-5GIDE 11.6
GTEX-13VXU-2926-SM-5LU5C 11.5
GTEX-13NYB-3026-SM-5IJD7 11.4
GTEX-RU72-3026-SM-5SI7Y 11.4
GTEX-11PRG-2926-SM-5987A 11.3
GTEX-QMR6-1426-SM-32PLA 11.3
GTEX-11NV4-2126-SM-5N9DS 11.2
GTEX-WWYW-3126-SM-3NB39 11.2
GTEX-XLM4-3026-SM-4AT6L 11.1
GTEX-Y111-2726-SM-4TT3N 11.1
GTEX-YFC4-3126-SM-5PNV6 11.1
GTEX-12WSC-3026-SM-5GCNF 10.9
GTEX-13OVH-3026-SM-5MR4N 10.9
GTEX-ZAK1-3026-SM-5S2MJ 10.9
GTEX-144GL-3026-SM-5Q5CW 10.8
GTEX-147GR-3026-SM-5S2ML 10.7
GTEX-WHSE-3026-SM-3P5ZH 10.7
GTEX-14ASI-3026-SM-5S2PN 10.6
GTEX-12ZZX-2926-SM-5GCOQ 10.5
GTEX-WL46-2926-SM-3LK82 10.5
GTEX-11NUK-2926-SM-5A5MD 10.4
GTEX-1313W-3126-SM-5LZUI 10.4
GTEX-145MG-3026-SM-5RQJA 10.4
GTEX-13PL6-3126-SM-5LUAR 10.3
GTEX-ZUA1-3026-SM-59HJC 10.3
GTEX-117XS-3026-SM-5N9CA 10.2
GTEX-13FLW-1426-SM-5K7YE 10.2
GTEX-ZE7O-3126-SM-5HL5X 10.2
GTEX-Y8DK-0826-SM-4TT3T 10.0
GTEX-12WSH-3026-SM-5CVNI 9.9
GTEX-13O3O-3126-SM-5KM3H 9.8
GTEX-13X6J-3026-SM-5Q5CU 9.8
GTEX-14BMV-3026-SM-5S2PQ 9.7
GTEX-T6MN-2626-SM-32PMQ 9.7
GTEX-UTHO-3026-SM-3GAFB 9.5
GTEX-XOTO-3026-SM-4B65M 9.5
GTEX-131YS-3126-SM-5KLYT 9.4
GTEX-13O3Q-2926-SM-5KM45 9.4
GTEX-ZYFD-3026-SM-5E44C 9.3
GTEX-11DXW-1126-SM-5H12Q 9.2
GTEX-RNOR-2326-SM-2TF4I 9.2
GTEX-YJ89-3026-SM-5IFJI 9.1
GTEX-13SLX-3126-SM-5S2Q5 8.4
GTEX-145MH-3026-SM-5Q5DZ 8.2
GTEX-11ZUS-2926-SM-5FQSL 7.4
GTEX-T5JC-2426-SM-3NMDB 7.3
GTEX-TSE9-3026-SM-3DB76 7.3
GTEX-WVLH-3026-SM-3MJG9 7.0
GTEX-T2IS-3026-SM-32QPM 6.7
GTEX-Z93S-2926-SM-57WB9 6.3
GTEX-PVOW-2526-SM-2XCF7 5.9
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 10.2
Samples: 108

Max RPKM: 25.7
Min RPKM: 3.9
Std RPKM: 4.1
Median RPKM: 9.3
GTEX-13N2G-0011-R10a-SM-5MR34 25.7
GTEX-11ZUS-0011-R10b-SM-5BC79 24.9
GTEX-13OVJ-0011-R10b-SM-5L3HT 22.2
GTEX-NL4W-0011-R10A-SM-2I3DY 22.0
GTEX-XMD1-0011-R10A-SM-4AT4A 21.7
GTEX-12WSA-0011-R10b-SM-5P9ET 16.9
GTEX-1445S-0011-R10a-SM-5PNWB 16.7
GTEX-NPJ8-0011-R10A-SM-2YUMO 16.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 15.6
GTEX-13JVG-0011-R10b-SM-5KM2P 15.6
GTEX-N7MT-0011-R10A-SM-2I3E1 15.3
GTEX-13QJC-0011-R10a-SM-5SI63 15.2
GTEX-13SLW-0011-R10a-SM-5S2UI 14.5
GTEX-13X6I-0011-R10a-SM-5PNWI 14.3
GTEX-QVJO-0011-R10A-SM-2S1QJ 14.2
GTEX-13JUV-0011-R10b-SM-5LZXR 13.9
GTEX-X261-0011-R10B-SM-4E3JT 13.9
GTEX-ZE7O-0011-R10a-SM-57WAZ 13.1
GTEX-X585-0011-R10A-SM-46MUY 13.0
GTEX-XLM4-0011-R10A-SM-4AT5P 13.0
GTEX-X4EP-0011-R10B-SM-4QASJ 12.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 12.8
GTEX-13OW8-0011-R10a-SM-5L3H6 12.6
GTEX-13IVO-0011-R10a-SM-5LZY3 12.5
GTEX-14753-0011-R10b-SM-5S2WE 12.5
GTEX-QVUS-0011-R10A-SM-3GIK3 12.5
GTEX-11WQC-0011-R10a-SM-57WCT 12.4
GTEX-NPJ7-0011-R10A-SM-2I3E5 12.4
GTEX-11WQK-0011-R10a-SM-5BC6R 12.3
GTEX-1477Z-0011-R10b-SM-5S2RF 12.3
GTEX-13X6K-0011-R10a-SM-5P9JR 11.9
GTEX-X4XX-0011-R10B-SM-46MWO 11.8
GTEX-ZF28-0011-R10a-SM-4WWEH 11.5
GTEX-ZV68-0011-R10a-SM-51MT7 11.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 11.1
GTEX-14BIL-0011-R10a-SM-5SI75 10.8
GTEX-13FHO-0011-R10b-SM-5J2MM 10.7
GTEX-13FTZ-0011-R10b-SM-5KLZS 10.6
GTEX-T5JC-0011-R10A-SM-32PM2 10.5
GTEX-13NYS-0011-R10a-SM-5MR4S 10.4
GTEX-13OVL-0011-R10a-SM-5L3GS 10.3
GTEX-ZDXO-0011-R10a-SM-4WWD8 10.3
GTEX-145LS-0011-R10a-SM-5PNUQ 9.9
GTEX-OXRN-0011-R10A-SM-2I5GC 9.9
GTEX-13OW6-0011-R10a-SM-5L3HE 9.7
GTEX-TSE9-0011-R10A-SM-3DB7O 9.6
GTEX-11H98-0011-R10b-SM-5NQ98 9.5
GTEX-N7MS-0011-R10A-SM-2HMJK 9.5
GTEX-Q2AG-0011-R10A-SM-2HMLA 9.5
GTEX-131XW-0011-R10a-SM-5DUVA 9.4
GTEX-132Q8-0011-R10b-SM-5DUWZ 9.4
GTEX-13S7M-0011-R10b-SM-5PNZB 9.4
GTEX-147F4-0011-R10b-SM-5S2WC 9.4
GTEX-12ZZW-0011-R10b-SM-5HL9X 9.3
GTEX-145LU-0011-R10a-SM-5PNWJ 9.3
GTEX-WWYW-0011-R10A-SM-3NB35 9.3
GTEX-13G51-0011-R10b-SM-5LZYF 9.2
GTEX-RVPU-0011-R10A-SM-2XCAH 9.2
GTEX-13FLW-0011-R10b-SM-5LZZF 9.0
GTEX-OXRO-0011-R10A-SM-2I5EH 8.9
GTEX-ZXG5-0011-R10a-SM-57WDD 8.9
GTEX-QDT8-0011-R10A-SM-32PKG 8.7
GTEX-13NZA-0011-R10b-SM-5KM54 8.6
GTEX-NL3H-0011-R10A-SM-2I3E9 8.6
GTEX-13CZV-0011-R10b-SM-5LZYD 8.5
GTEX-ZVT3-0011-R10b-SM-57WB6 8.5
GTEX-131YS-0011-R10b-SM-5EQ5N 8.4
GTEX-QMR6-0011-R10A-SM-32PKO 8.4
GTEX-13FXS-0011-R10a-SM-5J2MA 8.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 8.3
GTEX-12WSM-0011-R10a-SM-5DUWV 8.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 7.9
GTEX-12WSF-0011-R10a-SM-5LZVH 7.8
GTEX-13QIC-0011-R10a-SM-5O9C7 7.8
GTEX-ZVZQ-0011-R10b-SM-51MRT 7.8
GTEX-131XH-0011-R10a-SM-5EGLJ 7.7
GTEX-13N1W-0011-R10b-SM-5MR4H 7.6
GTEX-P44H-0011-R10A-SM-2XCEK 7.6
GTEX-ZUA1-0011-R10a-SM-51MT6 7.6
GTEX-13NYB-0011-R10a-SM-5KM43 7.5
GTEX-147GR-0011-R10b-SM-5S2UM 7.4
GTEX-Y8DK-0011-R10A-SM-4SOK1 7.4
GTEX-13O3O-0011-R10a-SM-5LUA9 7.3
GTEX-S7SE-0011-R10A-SM-2XCDF 7.2
GTEX-YFC4-0011-R10a-SM-4SOK5 7.2
GTEX-12WSD-0011-R10b-SM-5GU79 7.1
GTEX-YJ89-0011-R10a-SM-4SOK9 7.1
GTEX-12WSH-0011-R10a-SM-5LZUS 7.0
GTEX-14ASI-0011-R10b-SM-5S2VZ 7.0
GTEX-13OW7-0011-R10a-SM-5L3H3 6.8
GTEX-139TS-0011-R10a-SM-5K7TU 6.6
GTEX-12126-0011-R10b-SM-5BC6T 6.5
GTEX-145MG-0011-R10a-SM-5PNWG 6.5
GTEX-WZTO-0011-R10B-SM-4E3KB 6.5
GTEX-12ZZX-0011-R10b-SM-5DUWK 6.3
GTEX-13SLX-0011-R10a-SM-5P9HV 6.3
GTEX-145MH-0011-R10b-SM-5PNUK 6.1
GTEX-WVLH-0011-R10A-SM-3MJFM 6.1
GTEX-12WSC-0011-R10a-SM-5GU57 5.9
GTEX-13O3Q-0011-R10b-SM-5KM39 5.9
GTEX-T6MN-0011-R10A-SM-32QP7 5.9
GTEX-12ZZY-0011-R10b-SM-5HL7W 5.8
GTEX-WL46-0011-R10A-SM-3MJFQ 5.8
GTEX-13X6J-0011-R10b-SM-5PNWA 5.3
GTEX-Z93S-0011-R10a-SM-4RGNM 5.3
GTEX-1313W-0011-R10b-SM-5DUXA 5.1
GTEX-14BIN-0011-R10a-SM-5S2UA 4.9
GTEX-12WSE-0011-R10b-SM-5P9JV 3.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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