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Term
Gene name

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Chromosome

External id

In atlas

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Reliability

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Validation

Method

Validation

Method

Validation

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Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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CCL21
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    TISSUE

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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:23.2TPM
GTEx:22.4RPKM
FANTOM5:83.9Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA051210

 

Antibody CAB005067

 

Glandular cells

Not detected   Not detected  
   
   
   

PROSTATE - HPA RNA-seq

Average TPM

23.2

overview Male, age 62
Sample 1
TPM: 21.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 27.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 9.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 12.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 33.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 3.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 34.1
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 20.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 53.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

22.4

GTEx sample id

RPKM

5.812.824.80.148.8020406080100120140
 
5.812.824.80.148.8020406080100120140

Prostate

Prostate
RPKM: 22.4
Samples: 106

Max RPKM: 145.7
Min RPKM: 0.1
Std RPKM: 27.9
Median RPKM: 12.8
GTEX-13OW8-0426-SM-5J2NR 145.7
GTEX-13N2G-1826-SM-5KM1I 137.4
GTEX-QLQ7-1326-SM-4R1JY 117.1
GTEX-13G51-2326-SM-5LZXV 112.6
GTEX-U8XE-2526-SM-4E3IT 89.9
GTEX-11O72-2726-SM-5HL6K 83.9
GTEX-SJXC-2026-SM-4DM6N 74.3
GTEX-XOTO-2826-SM-4B65I 70.2
GTEX-ZLFU-1726-SM-4WWBU 59.1
GTEX-T8EM-1826-SM-4DM7F 57.1
GTEX-VJYA-1226-SM-3GIJ6 55.3
GTEX-14ABY-0726-SM-5Q5DF 54.3
GTEX-11OF3-1726-SM-5GU5Q 48.8
GTEX-1399T-1226-SM-5P9J5 48.0
GTEX-NPJ8-2426-SM-3MJHL 42.7
GTEX-12ZZZ-2026-SM-5LZWJ 42.6
GTEX-OOBJ-2026-SM-3NB1R 38.4
GTEX-RM2N-1126-SM-48FCY 37.1
GTEX-WFG8-1826-SM-4LVM4 36.4
GTEX-S95S-1026-SM-4B64M 35.9
GTEX-WK11-2626-SM-4OOSK 35.2
GTEX-131XF-1926-SM-5DUW4 34.6
GTEX-12696-2226-SM-5EQ65 31.8
GTEX-13O61-1726-SM-5KM46 29.6
GTEX-Y8E4-2126-SM-5RQHO 27.5
GTEX-REY6-2126-SM-48FD9 26.7
GTEX-11ZUS-2126-SM-5N9E6 24.9
GTEX-111FC-2026-SM-5GZYO 24.3
GTEX-S4Q7-1026-SM-4AD75 24.3
GTEX-13FHO-2826-SM-5K7ZA 23.8
GTEX-ZTX8-1026-SM-5EGHD 23.4
GTEX-117YW-1426-SM-5EGGO 23.2
GTEX-QEG4-2226-SM-4R1JM 21.2
GTEX-144GM-0826-SM-5O98R 21.0
GTEX-ZVP2-0826-SM-59HJ6 20.8
GTEX-11NSD-0826-SM-5986S 20.1
GTEX-RWSA-2026-SM-47JX8 18.8
GTEX-ZPU1-2026-SM-57WFI 18.2
GTEX-ZTTD-2726-SM-57WFA 17.9
GTEX-Q2AI-1126-SM-48U19 16.9
GTEX-ZY6K-1526-SM-5GZXE 16.5
GTEX-XQ3S-2526-SM-4BOOG 16.4
GTEX-XGQ4-1826-SM-4AT6F 16.3
GTEX-1399R-0526-SM-5IJEF 16.1
GTEX-132NY-2826-SM-5P9G2 15.8
GTEX-13FXS-2826-SM-5LZYC 15.1
GTEX-UTHO-2726-SM-4JBH9 15.0
GTEX-OOBK-2025-SM-3LK5S 14.3
GTEX-146FQ-1726-SM-5QGPX 14.1
GTEX-XMK1-1026-SM-4B65H 14.1
GTEX-YJ8A-1126-SM-5IFJU 13.4
GTEX-ZDYS-1226-SM-5IJF3 13.4
GTEX-V1D1-1926-SM-4JBGX 13.1
GTEX-X5EB-1826-SM-4E3K8 12.4
GTEX-11DYG-2526-SM-5N9BB 12.1
GTEX-14E6E-1126-SM-5S2R4 11.5
GTEX-WZTO-0926-SM-4PQZ3 11.4
GTEX-139T6-1526-SM-5P9G6 10.9
GTEX-WH7G-1726-SM-4LVKY 10.9
GTEX-12C56-1326-SM-5FQSV 10.6
GTEX-11EQ9-1726-SM-5HL6U 10.5
GTEX-WFG7-1826-SM-3GIL1 10.0
GTEX-14BMV-2326-SM-5RQJ4 9.6
GTEX-11WQK-2726-SM-5EQMU 9.3
GTEX-S33H-1826-SM-4AD65 8.8
GTEX-YF7O-1926-SM-4W1YQ 8.6
GTEX-V955-1826-SM-4JBIL 8.5
GTEX-12BJ1-1226-SM-5LUAE 8.4
GTEX-S3XE-1326-SM-4AD4H 8.3
GTEX-WFON-1626-SM-4LVMV 8.1
GTEX-11P82-1126-SM-5BC5K 7.6
GTEX-ZZ64-0926-SM-5E44L 7.5
GTEX-13111-1326-SM-5GCNO 7.4
GTEX-U412-2026-SM-4DXSI 6.9
GTEX-XPVG-2026-SM-4B65E 6.8
GTEX-QV31-1026-SM-4R1K3 6.7
GTEX-QV44-1526-SM-4R1KI 6.7
GTEX-13O21-1126-SM-5N9EV 6.3
GTEX-148VJ-1826-SM-5Q5DV 6.0
GTEX-111YS-1726-SM-5GIED 5.7
GTEX-ZUA1-2826-SM-59HLE 5.6
GTEX-NFK9-2226-SM-3MJGP 5.3
GTEX-13NYS-1026-SM-5KLZT 4.9
GTEX-QMRM-1426-SM-4R1K8 4.7
GTEX-SNOS-1026-SM-4DM4Y 4.7
GTEX-14C5O-2826-SM-5RQI6 4.6
GTEX-13FTW-1226-SM-5LZZ1 4.5
GTEX-XAJ8-0626-SM-47JY4 3.9
GTEX-YB5E-1826-SM-5IFI4 3.7
GTEX-PLZ6-1126-SM-3P5ZR 3.3
GTEX-U4B1-1426-SM-4DXTX 2.9
GTEX-SNMC-0926-SM-4DM5U 2.8
GTEX-WOFM-0326-SM-4OOSL 2.5
GTEX-U3ZM-0926-SM-4DXSW 2.4
GTEX-11TUW-2126-SM-5GU7B 2.3
GTEX-OIZH-2026-SM-3NB1M 2.1
GTEX-11TT1-2026-SM-5EQM8 2.0
GTEX-13RTJ-2126-SM-5S2PZ 2.0
GTEX-ZT9W-1626-SM-4YCDQ 1.9
GTEX-111CU-1526-SM-5N9FS 1.6
GTEX-Y9LG-1826-SM-4VBQC 1.3
GTEX-145LT-0626-SM-5O99E 0.8
GTEX-145LV-1226-SM-5S2QH 0.7
GTEX-11P7K-0626-SM-5985Z 0.6
GTEX-117YX-1526-SM-5H12T 0.5
GTEX-132QS-1126-SM-5P9GC 0.1
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

83.9

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 83.9
FF:10022-101D4 73,79,93 years, male 83.9

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