We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CCL21
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:476.0TPM
GTEx:110.0RPKM
FANTOM5:306.6Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Medium
Cells in white pulp:Low
 

Antibody staining

Antibody HPA051210

 

Antibody CAB005067

 

Cells in red pulp

Medium   Low  

Cells in white pulp

Low   Not detected  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

476.0

overview Female, age 60
Sample 1
TPM: 531.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 538.8
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 596.4
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 356.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 356.3
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

110.0

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 110.0
Samples: 104

Max RPKM: 616.3
Min RPKM: 2.8
Std RPKM: 108.1
Median RPKM: 73.4
GTEX-O5YT-0926-SM-48TDG 616.3
GTEX-OOBJ-0926-SM-48TDO 523.3
GTEX-QMRM-0226-SM-4R1K7 429.3
GTEX-QCQG-0226-SM-48U28 360.0
GTEX-Q2AH-0226-SM-48U1I 332.5
GTEX-X585-1826-SM-4QAS3 321.0
GTEX-QLQW-0126-SM-447BK 312.5
GTEX-U3ZH-0126-SM-4DXUK 305.3
GTEX-ZYWO-0226-SM-5GZX3 288.9
GTEX-131XE-1126-SM-5EGHW 264.1
GTEX-PX3G-0926-SM-48U12 253.5
GTEX-13N11-0126-SM-5KM2Z 231.3
GTEX-XMK1-0126-SM-4B65F 229.7
GTEX-WHWD-0126-SM-4OORS 229.5
GTEX-OIZH-0926-SM-48TBR 210.9
GTEX-1122O-0526-SM-5N9DM 204.3
GTEX-XV7Q-0126-SM-4BRVK 204.2
GTEX-13CF3-0226-SM-5J1NW 171.1
GTEX-ZLFU-0526-SM-4WWBN 166.5
GTEX-XPVG-0626-SM-4B65B 163.9
GTEX-ZPU1-1026-SM-4YCEQ 160.3
GTEX-11NSD-0426-SM-5N9CR 156.1
GTEX-UPK5-1626-SM-4JBHI 154.2
GTEX-QV44-0126-SM-4R1KH 149.5
GTEX-1399R-0226-SM-5IJGG 147.7
GTEX-12WSG-0926-SM-5EGIH 144.3
GTEX-12WSJ-0526-SM-5GCOZ 144.0
GTEX-XAJ8-0126-SM-47JYG 143.5
GTEX-XUJ4-0226-SM-4BOP8 137.0
GTEX-POMQ-0126-SM-48TD6 121.8
GTEX-P4QS-0926-SM-48TBS 118.9
GTEX-Y3IK-0126-SM-4WWE9 118.1
GTEX-13S86-0126-SM-5S2PI 116.7
GTEX-ZLWG-0426-SM-4WWFA 115.9
GTEX-Y114-0726-SM-4TT6U 112.2
GTEX-131XG-0426-SM-5IFGD 103.4
GTEX-Q734-0226-SM-48U1A 99.8
GTEX-QDVN-0526-SM-48TZ4 97.3
GTEX-11VI4-0126-SM-5GU6Z 94.1
GTEX-X4LF-0226-SM-4QAS8 93.0
GTEX-139YR-0426-SM-5IFFV 92.1
GTEX-X3Y1-0126-SM-4PQZA 88.1
GTEX-QV31-0126-SM-447BP 88.0
GTEX-ZVP2-0526-SM-51MSC 88.0
GTEX-T5JW-0126-SM-4DM6K 85.3
GTEX-XXEK-0126-SM-4BRVU 84.1
GTEX-ZP4G-0326-SM-4YCEF 83.0
GTEX-12WSK-0126-SM-5GCO7 79.6
GTEX-UJHI-0126-SM-4IHLP 79.0
GTEX-ZAB5-0526-SM-5CVMU 76.1
GTEX-RUSQ-0126-SM-47JWV 74.8
GTEX-YB5E-0426-SM-5IFHR 74.0
GTEX-11P7K-0426-SM-5BC5H 72.8
GTEX-132QS-0226-SM-5IFFZ 69.8
GTEX-139T6-0226-SM-5IFGZ 69.3
GTEX-XGQ4-0126-SM-4AT4H 66.6
GTEX-U4B1-0526-SM-4DXTK 66.3
GTEX-12WSN-0126-SM-5DUX5 62.6
GTEX-11LCK-0126-SM-5A5M5 62.2
GTEX-VJYA-0126-SM-4KL1P 61.9
GTEX-144GN-2126-SM-5O99D 59.7
GTEX-14E6E-1226-SM-5S2R5 59.3
GTEX-S4Z8-0226-SM-4AD5K 58.5
GTEX-14DAR-0326-SM-5S2PS 58.3
GTEX-XQ8I-1726-SM-4BOQB 58.0
GTEX-YEC4-0126-SM-4W21T 56.5
GTEX-146FR-1926-SM-5NQA6 54.5
GTEX-Y5LM-0326-SM-4VBRN 54.4
GTEX-1399S-0226-SM-5IFFG 52.5
GTEX-ZYFG-0726-SM-5GIDX 52.5
GTEX-R55G-0226-SM-48FEI 52.3
GTEX-13FH7-1326-SM-5IFG8 49.5
GTEX-13PVR-0326-SM-5RQJY 46.6
GTEX-11XUK-0426-SM-5EQML 45.4
GTEX-147F3-0126-SM-5NQBJ 45.3
GTEX-WFON-0126-SM-4LVM9 43.7
GTEX-ZV6S-0826-SM-5NQ6Z 43.2
GTEX-YFCO-0926-SM-5LUA5 41.8
GTEX-11P81-1326-SM-5GU5S 41.2
GTEX-13X6H-0726-SM-5Q5BX 40.0
GTEX-145MN-0126-SM-5RQHY 39.9
GTEX-12BJ1-0726-SM-5EGGF 37.7
GTEX-11EQ9-0426-SM-5A5JY 36.6
GTEX-S3XE-0626-SM-4AD6B 36.3
GTEX-146FQ-0626-SM-5LU9U 34.5
GTEX-Y3I4-0126-SM-4TT26 31.5
GTEX-ZVZP-0726-SM-59HKA 31.3
GTEX-U3ZN-0126-SM-4DXUM 30.8
GTEX-PW2O-0126-SM-48TC8 27.1
GTEX-1211K-0426-SM-5FQTP 26.1
GTEX-P4PP-0926-SM-48TBZ 25.3
GTEX-13U4I-1626-SM-5IFFR 23.6
GTEX-ZDTT-1026-SM-5KM19 21.6
GTEX-PLZ6-0126-SM-48TC6 20.4
GTEX-13111-0126-SM-5EGHO 20.0
GTEX-YB5K-1926-SM-4VDT4 19.3
GTEX-W5WG-0626-SM-4SOID 17.9
GTEX-117YX-2126-SM-5GIEL 17.8
GTEX-Z9EW-0726-SM-5HL9H 13.8
GTEX-13VXT-1326-SM-5LU3Y 13.0
GTEX-11DXX-0726-SM-5H12X 12.4
GTEX-13PL7-1126-SM-5MR5O 11.4
GTEX-ZZPU-0126-SM-5E446 10.7
GTEX-Y8LW-0126-SM-4VBS1 2.8
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

306.6

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 306.6
FF:10025-101D7 39,50,70 years, male 306.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.