Tissue expression of GGH - Staining in colon

COLON - Expression summary

Protein expression

RNA expression

HPA:	36.3	TPM
GTEx:	9.4	RPKM
FANTOM5:	12.1	Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Low
Glandular cells:	High
Peripheral nerve/ganglion:	Medium

Antibody staining	Antibody HPA025226	Antibody CAB019296
Endothelial cells	Not detected	Medium
Glandular cells	Medium	High
Peripheral nerve/ganglion	Medium	High

COLON - HPA RNA-seq

Average TPM	36.3

Male, age 54

Sample 1
TPM: 35.4

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 40.6

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 29.3

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 34.4

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 23.1

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 23.1

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 56.5

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 38.5

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 25.1

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 53.1

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 56.3

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 35.3

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 21.3

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	9.4

GTEx sample id

RPKM

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.5

Samples: 149

Max RPKM: 6.6
Min RPKM: 0.3
Std RPKM: 0.9
Median RPKM: 1.3

GTEX-XBED-1726-SM-47JYO

6.6

GTEX-YJ8A-1726-SM-5P9IQ

6.2

GTEX-WQUQ-2626-SM-4MVNP

4.5

GTEX-ZF28-2526-SM-57WFH

4.5

GTEX-Y5LM-1426-SM-5RQJL

3.6

GTEX-V955-1726-SM-4JBHF

3.4

GTEX-146FH-2426-SM-5Q5EW

3.3

GTEX-ZE7O-2626-SM-51MSS

3.2

Show all

Colon - Transverse

Colon - Transverse
RPKM: 15.3

Samples: 196

Max RPKM: 46.6
Min RPKM: 0.4
Std RPKM: 11.7
Median RPKM: 16

GTEX-111CU-1426-SM-5GZYP

46.6

GTEX-13S86-1626-SM-5Q5C5

43.5

GTEX-T5JW-1126-SM-4DM5V

42.9

GTEX-S7SF-1926-SM-4AT5B

40.9

GTEX-145LT-0926-SM-5LU9C

40.1

GTEX-13FTW-1826-SM-5IJEN

39.8

GTEX-U4B1-1126-SM-4DXV3

39.7

GTEX-11DXX-1826-SM-5H126

38.1

Show all

COLON - FANTOM5 CAGE

Average Tags Per Million	12.1

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 12.1

FF:10014-101C5

62,83,84 years, mixed

12.1