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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:74.1TPM
GTEx:10.4RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:Not detected
Neuropil:Low
 

Antibody staining

Antibody HPA000263

 

Antibody HPA000763

 

Antibody CAB037312

 

Endothelial cells

Medium   Low   Not detected  

Glial cells

Medium   Low   Low  

Neuronal cells

Not detected   Low   Not detected  

Neuropil

Medium   Low   Not detected  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

74.1

N/A Male, age 5
Sample 1
TPM: 49.1
overview Female, age 40
Sample 2
TPM: 91.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 82.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

10.4

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 10.1
Samples: 114

Max RPKM: 26.7
Min RPKM: 5.5
Std RPKM: 3
Median RPKM: 9.2
GTEX-13G51-3026-SM-5IJB8 26.7
GTEX-144FL-3026-SM-5O99C 19.0
GTEX-QVUS-2826-SM-3GADB 17.3
GTEX-N7MT-1126-SM-5SI7V 16.2
GTEX-12WSA-2926-SM-5EQ4D 16.0
GTEX-111FC-3126-SM-5GZZ2 15.4
GTEX-12ZZY-3026-SM-5GCOU 15.4
GTEX-NPJ8-1526-SM-2D7VU 14.6
GTEX-UTHO-3026-SM-3GAFB 14.6
GTEX-139T8-1026-SM-5J2MC 14.2
GTEX-13FHP-3026-SM-5IJBS 14.1
GTEX-QDT8-2926-SM-32PKC 14.0
GTEX-1192X-3126-SM-5N9BY 13.7
GTEX-11GS4-3126-SM-5A5LH 13.7
GTEX-QMR6-1426-SM-32PLA 13.7
GTEX-QVJO-1426-SM-2S1QY 13.7
GTEX-NPJ7-2726-SM-2I3FT 13.5
GTEX-ZZPT-3026-SM-5GZXH 13.5
GTEX-13OVJ-2826-SM-5L3GW 13.3
GTEX-1445S-3026-SM-5O9BR 12.5
GTEX-13FHO-3026-SM-5J1O9 12.3
GTEX-PWO3-0926-SM-2I5EY 12.3
GTEX-X585-3026-SM-46MWF 11.9
GTEX-13FLW-1426-SM-5K7YE 11.8
GTEX-13NYB-3026-SM-5IJD7 11.8
GTEX-13OW8-2826-SM-5L3GC 11.6
GTEX-11ONC-2926-SM-5P9JM 11.3
GTEX-11GSP-3226-SM-5986O 11.1
GTEX-1313W-3126-SM-5LZUI 11.1
GTEX-13JVG-3126-SM-5L3FH 11.1
GTEX-13PVQ-3026-SM-5SI93 11.1
GTEX-12ZZZ-3026-SM-5BC67 11.0
GTEX-OXRN-2426-SM-2I5EQ 11.0
GTEX-13X6K-2926-SM-5Q5D5 10.9
GTEX-13IVO-2926-SM-5L3CZ 10.7
GTEX-13JUV-2926-SM-5LZX7 10.7
GTEX-147GR-3026-SM-5S2ML 10.6
GTEX-XLM4-3026-SM-4AT6L 10.6
GTEX-11DXY-3226-SM-5GIDE 10.5
GTEX-1399T-3026-SM-5KLZC 10.5
GTEX-YFC4-3126-SM-5PNV6 10.5
GTEX-12WSD-3126-SM-5HL7P 10.3
GTEX-14A5I-2926-SM-5Q5CQ 10.3
GTEX-RU72-3026-SM-5SI7Y 10.3
GTEX-ZAK1-3026-SM-5S2MJ 10.1
GTEX-X4XX-3026-SM-3NMB2 9.9
GTEX-11TTK-2926-SM-5PNYP 9.8
GTEX-13OW7-3026-SM-5L3GY 9.8
GTEX-13OW6-3026-SM-5J2MI 9.7
GTEX-11EI6-3026-SM-5GZZO 9.5
GTEX-11NUK-2926-SM-5A5MD 9.3
GTEX-13NYC-2826-SM-5K7WR 9.3
GTEX-PVOW-2526-SM-2XCF7 9.3
GTEX-ZAJG-3126-SM-5HL9J 9.3
GTEX-1128S-2726-SM-5H12C 9.2
GTEX-12ZZW-2926-SM-5LZUP 9.2
GTEX-Y8DK-0826-SM-4TT3T 9.2
GTEX-1117F-3226-SM-5N9CT 9.1
GTEX-13OVH-3026-SM-5MR4N 9.1
GTEX-11O72-2926-SM-5BC4V 9.0
GTEX-R55F-1326-SM-5S2V4 9.0
GTEX-XOTO-3026-SM-4B65M 9.0
GTEX-132Q8-3026-SM-5PNVG 8.9
GTEX-11GSO-2926-SM-5HL73 8.8
GTEX-145LS-3126-SM-5Q5BY 8.8
GTEX-14ASI-3026-SM-5S2PN 8.8
GTEX-Q2AG-2926-SM-2HMJ3 8.7
GTEX-12WSH-3026-SM-5CVNI 8.6
GTEX-13PL6-3126-SM-5LUAR 8.6
GTEX-13X6J-3026-SM-5Q5CU 8.6
GTEX-WL46-2926-SM-3LK82 8.6
GTEX-11OC5-0726-SM-5P9JK 8.5
GTEX-131XW-3126-SM-5LZUC 8.5
GTEX-13QIC-2926-SM-5J2NF 8.5
GTEX-13VXU-2926-SM-5LU5C 8.4
GTEX-14BMV-3026-SM-5S2PQ 8.4
GTEX-T6MN-2626-SM-32PMQ 8.4
GTEX-11DXW-1126-SM-5H12Q 8.3
GTEX-13S7M-3126-SM-5RQJQ 8.3
GTEX-13NYS-3126-SM-5KLYV 8.2
GTEX-145MF-2726-SM-5O995 8.2
GTEX-TSE9-3026-SM-3DB76 8.2
GTEX-WHSE-3026-SM-3P5ZH 8.2
GTEX-WZTO-2926-SM-3NM9I 8.2
GTEX-ZUA1-3026-SM-59HJC 8.2
GTEX-ZVT3-3026-SM-5E43N 8.2
GTEX-11EMC-3226-SM-5EGKW 8.1
GTEX-144GL-3026-SM-5Q5CW 8.1
GTEX-WWYW-3126-SM-3NB39 8.1
GTEX-131YS-3126-SM-5KLYT 8.0
GTEX-RNOR-2326-SM-2TF4I 8.0
GTEX-ZE7O-3126-SM-5HL5X 7.9
GTEX-11NV4-2126-SM-5N9DS 7.8
GTEX-12WSC-3026-SM-5GCNF 7.8
GTEX-145MH-3026-SM-5Q5DZ 7.8
GTEX-Y111-2726-SM-4TT3N 7.7
GTEX-117XS-3026-SM-5N9CA 7.6
GTEX-11PRG-2926-SM-5987A 7.6
GTEX-12ZZX-2926-SM-5GCOQ 7.6
GTEX-145MG-3026-SM-5RQJA 7.5
GTEX-WVLH-3026-SM-3MJG9 7.4
GTEX-11WQK-3026-SM-5EQL6 7.3
GTEX-YJ89-3026-SM-5IFJI 7.3
GTEX-T2IS-3026-SM-32QPM 7.2
GTEX-13FXS-3126-SM-5J2NN 7.1
GTEX-13O3Q-2926-SM-5KM45 7.1
GTEX-T5JC-2426-SM-3NMDB 6.9
GTEX-13O3O-3126-SM-5KM3H 6.8
GTEX-13SLX-3126-SM-5S2Q5 6.6
GTEX-ZYFD-3026-SM-5E44C 6.6
GTEX-12126-1026-SM-5P9JJ 6.5
GTEX-11ZUS-2926-SM-5FQSL 6.3
GTEX-Z93S-2926-SM-57WB9 6.2
GTEX-11OF3-2926-SM-5HL78 5.5
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 10.8
Samples: 108

Max RPKM: 41.2
Min RPKM: 5
Std RPKM: 4.5
Median RPKM: 9.6
GTEX-XMD1-0011-R10A-SM-4AT4A 41.2
GTEX-ZE7O-0011-R10a-SM-57WAZ 28.7
GTEX-12WSA-0011-R10b-SM-5P9ET 19.9
GTEX-QDT8-0011-R10A-SM-32PKG 19.6
GTEX-13FLW-0011-R10b-SM-5LZZF 18.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 18.1
GTEX-12WSD-0011-R10b-SM-5GU79 17.6
GTEX-13JVG-0011-R10b-SM-5KM2P 16.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 16.4
GTEX-QVUS-0011-R10A-SM-3GIK3 15.6
GTEX-11GSP-0011-R10a-SM-5NQ7J 14.7
GTEX-P44H-0011-R10A-SM-2XCEK 14.7
GTEX-ZAB4-0011-R10a-SM-4SOKH 14.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 13.8
GTEX-WWYW-0011-R10A-SM-3NB35 13.8
GTEX-13JUV-0011-R10b-SM-5LZXR 13.2
GTEX-13N2G-0011-R10a-SM-5MR34 13.2
GTEX-1445S-0011-R10a-SM-5PNWB 13.1
GTEX-OXRN-0011-R10A-SM-2I5GC 13.0
GTEX-QMR6-0011-R10A-SM-32PKO 13.0
GTEX-13X6I-0011-R10a-SM-5PNWI 12.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 12.8
GTEX-11ZUS-0011-R10b-SM-5BC79 12.6
GTEX-ZXG5-0011-R10a-SM-57WDD 12.6
GTEX-13X6K-0011-R10a-SM-5P9JR 12.4
GTEX-RVPU-0011-R10A-SM-2XCAH 12.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 12.3
GTEX-12ZZW-0011-R10b-SM-5HL9X 12.2
GTEX-13SLW-0011-R10a-SM-5S2UI 12.2
GTEX-13CZV-0011-R10b-SM-5LZYD 12.1
GTEX-13S7M-0011-R10b-SM-5PNZB 12.0
GTEX-145LU-0011-R10a-SM-5PNWJ 12.0
GTEX-NPJ8-0011-R10A-SM-2YUMO 11.9
GTEX-X4XX-0011-R10B-SM-46MWO 11.7
GTEX-13FLV-0011-R10b-SM-5LZZ2 11.6
GTEX-139TS-0011-R10a-SM-5K7TU 11.4
GTEX-13FHO-0011-R10b-SM-5J2MM 11.4
GTEX-XLM4-0011-R10A-SM-4AT5P 11.4
GTEX-14BIL-0011-R10a-SM-5SI75 11.3
GTEX-NL4W-0011-R10A-SM-2I3DY 11.3
GTEX-S7SE-0011-R10A-SM-2XCDF 11.2
GTEX-WVLH-0011-R10A-SM-3MJFM 11.2
GTEX-132Q8-0011-R10b-SM-5DUWZ 11.1
GTEX-13OVL-0011-R10a-SM-5L3GS 11.1
GTEX-11WQC-0011-R10a-SM-57WCT 11.0
GTEX-YFC4-0011-R10a-SM-4SOK5 10.5
GTEX-X585-0011-R10A-SM-46MUY 10.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 10.3
GTEX-11H98-0011-R10b-SM-5NQ98 10.2
GTEX-ZV68-0011-R10a-SM-51MT7 10.2
GTEX-N7MT-0011-R10A-SM-2I3E1 9.8
GTEX-13G51-0011-R10b-SM-5LZYF 9.6
GTEX-1477Z-0011-R10b-SM-5S2RF 9.6
GTEX-ZUA1-0011-R10a-SM-51MT6 9.6
GTEX-12WSM-0011-R10a-SM-5DUWV 9.5
GTEX-13FTZ-0011-R10b-SM-5KLZS 9.5
GTEX-13OW8-0011-R10a-SM-5L3H6 9.4
GTEX-Y8DK-0011-R10A-SM-4SOK1 9.4
GTEX-ZF28-0011-R10a-SM-4WWEH 9.4
GTEX-131YS-0011-R10b-SM-5EQ5N 9.2
GTEX-145LS-0011-R10a-SM-5PNUQ 9.2
GTEX-TSE9-0011-R10A-SM-3DB7O 9.2
GTEX-13QJC-0011-R10a-SM-5SI63 9.1
GTEX-145MG-0011-R10a-SM-5PNWG 9.1
GTEX-145MH-0011-R10b-SM-5PNUK 9.1
GTEX-12126-0011-R10b-SM-5BC6T 9.0
GTEX-147F4-0011-R10b-SM-5S2WC 9.0
GTEX-X261-0011-R10B-SM-4E3JT 9.0
GTEX-14753-0011-R10b-SM-5S2WE 8.9
GTEX-13QIC-0011-R10a-SM-5O9C7 8.8
GTEX-X4EP-0011-R10B-SM-4QASJ 8.8
GTEX-11WQK-0011-R10a-SM-5BC6R 8.7
GTEX-YJ89-0011-R10a-SM-4SOK9 8.7
GTEX-12WSH-0011-R10a-SM-5LZUS 8.6
GTEX-13OW6-0011-R10a-SM-5L3HE 8.6
GTEX-13RTJ-0011-R10b-SM-5O9CW 8.5
GTEX-Q2AG-0011-R10A-SM-2HMLA 8.5
GTEX-WZTO-0011-R10B-SM-4E3KB 8.4
GTEX-ZVT3-0011-R10b-SM-57WB6 8.4
GTEX-147GR-0011-R10b-SM-5S2UM 8.3
GTEX-14ASI-0011-R10b-SM-5S2VZ 8.3
GTEX-13IVO-0011-R10a-SM-5LZY3 8.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC 7.9
GTEX-131XH-0011-R10a-SM-5EGLJ 7.9
GTEX-13FXS-0011-R10a-SM-5J2MA 7.9
GTEX-N7MS-0011-R10A-SM-2HMJK 7.9
GTEX-OXRO-0011-R10A-SM-2I5EH 7.9
GTEX-13O3Q-0011-R10b-SM-5KM39 7.8
GTEX-T6MN-0011-R10A-SM-32QP7 7.8
GTEX-13X6J-0011-R10b-SM-5PNWA 7.6
GTEX-Z93S-0011-R10a-SM-4RGNM 7.6
GTEX-12ZZX-0011-R10b-SM-5DUWK 7.5
GTEX-T5JC-0011-R10A-SM-32PM2 7.5
GTEX-WL46-0011-R10A-SM-3MJFQ 7.5
GTEX-12WSF-0011-R10a-SM-5LZVH 7.4
GTEX-13NYB-0011-R10a-SM-5KM43 7.3
GTEX-13NZA-0011-R10b-SM-5KM54 7.1
GTEX-14BIN-0011-R10a-SM-5S2UA 7.0
GTEX-12WSC-0011-R10a-SM-5GU57 6.9
GTEX-13N1W-0011-R10b-SM-5MR4H 6.9
GTEX-13O3O-0011-R10a-SM-5LUA9 6.9
GTEX-NL3H-0011-R10A-SM-2I3E9 6.5
GTEX-13NYS-0011-R10a-SM-5MR4S 6.2
GTEX-13OW7-0011-R10a-SM-5L3H3 6.2
GTEX-1313W-0011-R10b-SM-5DUXA 6.0
GTEX-12WSE-0011-R10b-SM-5P9JV 5.8
GTEX-13SLX-0011-R10a-SM-5P9HV 5.8
GTEX-131XW-0011-R10a-SM-5DUVA 5.0
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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