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TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:27.8RPKM
FANTOM5:32.1Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA040454

 

Glial cells

Medium  

Neuronal cells

Not detected  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

27.8

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 27.8
Samples: 117

Max RPKM: 63.1
Min RPKM: 3.7
Std RPKM: 15.3
Median RPKM: 27.6
GTEX-13G51-0011-R5a-SM-5L3EB 63.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 58.0
GTEX-145MH-0011-R5a-SM-5P9JT 57.8
GTEX-12WSC-0011-R5b-SM-5CVNS 55.1
GTEX-1399T-0011-R5b-SM-5IJDK 53.9
GTEX-T5JC-0011-R5A-SM-32PLK 53.8
GTEX-131YS-0011-R5b-SM-5K7YB 53.7
GTEX-1313W-0011-R5b-SM-5L3EP 53.4
GTEX-13FXS-0011-R5b-SM-5LZYE 52.1
GTEX-13O3O-0011-R5b-SM-5KM44 51.1
GTEX-ZUA1-0011-R5b-SM-51MTG 50.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 49.9
GTEX-13X6J-0011-R5b-SM-5PNWT 48.9
GTEX-11OF3-0011-R5a-SM-57WB4 48.8
GTEX-13SLX-0011-R5a-SM-5O9BV 48.1
GTEX-13VXU-0011-R5a-SM-5O9D7 47.9
GTEX-139TT-0011-R5b-SM-5K7W8 47.7
GTEX-13FLW-0011-R5a-SM-5LZX6 47.6
GTEX-14ABY-0011-R5b-SM-5SI7B 47.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 47.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 46.7
GTEX-WHSE-0011-R5A-SM-3P5ZO 44.8
GTEX-WL46-0011-R5A-SM-3LK6V 43.5
GTEX-S7SE-0011-R5A-SM-2XCDA 42.1
GTEX-WVLH-0011-R5A-SM-3MJFW 41.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 41.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40.4
GTEX-13OVL-0011-R5b-SM-5L3FU 40.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 39.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 37.9
GTEX-11NV4-0011-R5a-SM-5NQ88 37.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 37.0
GTEX-13OW6-0011-R5a-SM-5O9BK 36.3
GTEX-11GSP-0011-R5a-SM-57WBE 36.0
GTEX-145LS-0011-R5a-SM-5SI65 35.9
GTEX-13X6K-0011-R5b-SM-5PNUE 35.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 35.0
GTEX-Z93S-0011-R5b-SM-4RGNI 35.0
GTEX-14BIM-0011-R5b-SM-5S2RM 34.8
GTEX-X585-0011-R5A-SM-46MVI 34.4
GTEX-R55E-0011-R5A-SM-2TC5N 34.1
GTEX-12WSF-0011-R5a-SM-5HL8K 33.6
GTEX-T6MN-0011-R5A-SM-32QPD 33.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 33.0
GTEX-N7MS-0011-R5a-SM-2HMK8 32.9
GTEX-11H98-0011-R5b-SM-57WCF 31.6
GTEX-12WSD-0011-R5b-SM-5CVNG 31.5
GTEX-13JUV-0011-R5a-SM-5LZY5 30.5
GTEX-13OW7-0011-R5b-SM-5O9DM 30.4
GTEX-13OW5-0011-R5b-SM-5L3FR 30.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 30.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 30.0
GTEX-13CZV-0011-R5a-SM-5K7XA 29.9
GTEX-13NYB-0011-R5a-SM-5MR45 29.8
GTEX-13S7M-0011-R5b-SM-5P9HS 29.2
GTEX-T2IS-0011-R5A-SM-32QP4 29.1
GTEX-RU72-0011-R5A-SM-2TF6U 28.3
GTEX-QVJO-0011-R5A-SM-2S1QM 28.2
GTEX-ZE7O-0011-R5a-SM-57WBO 27.6
GTEX-TSE9-0011-R5A-SM-3DB7J 27.5
GTEX-P44H-0011-R5A-SM-2XCEX 27.0
GTEX-WWYW-0011-R5A-SM-3NB3E 26.3
GTEX-13FLV-0011-R5a-SM-5LZWT 25.6
GTEX-13OVH-0011-R5b-SM-5KM4L 25.3
GTEX-RVPV-0011-R5A-SM-2TF69 25.2
GTEX-XOTO-0011-R5A-SM-4B657 25.0
GTEX-YJ89-0011-R5a-SM-4V6GM 24.5
GTEX-12ZZX-0011-R5a-SM-5HL89 24.0
GTEX-RVPU-0011-R5A-SM-2XCAD 23.1
GTEX-13NYS-0011-R5a-SM-5MR4D 22.8
GTEX-14BIN-0011-R5b-SM-5SI78 22.4
GTEX-12WSB-0011-R5b-SM-5GU67 21.8
GTEX-NL4W-0011-R5a-SM-2I3GD 21.7
GTEX-N7MT-0011-R5a-SM-2I3G6 21.6
GTEX-13X6I-0011-R5a-SM-5PNWW 21.0
GTEX-13CIG-0011-R5b-SM-5L3F2 20.8
GTEX-PVOW-0011-R5A-SM-32PL7 20.6
GTEX-132Q8-0011-R5a-SM-5IJDM 20.4
GTEX-OHPN-0011-R5A-SM-2I5FF 19.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 19.5
GTEX-ZXG5-0011-R5b-SM-57WBN 18.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 18.1
GTEX-144GO-0011-R5a-SM-5PNUR 16.3
GTEX-UTHO-0011-R5A-SM-3GIJD 15.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 15.7
GTEX-YFC4-0011-R5a-SM-4RGLR 15.0
GTEX-13JVG-0011-R5a-SM-5MR4O 14.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 14.5
GTEX-13112-0011-R5b-SM-5DUV8 12.8
GTEX-NL3H-0011-R5a-SM-2I3GB 12.7
GTEX-11WQC-0011-R5a-SM-5BC74 12.4
GTEX-144GL-0011-R5b-SM-5PNUJ 11.4
GTEX-OXRN-0011-R5A-SM-2I5EF 11.3
GTEX-12WSA-0011-R5b-SM-5GU5I 10.9
GTEX-13FHP-0011-R5b-SM-5LZY2 10.9
GTEX-ZV68-0011-R5a-SM-4YCDW 10.9
GTEX-X4XX-0011-R5A-SM-46MWN 10.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 10.2
GTEX-QMR6-0011-R5A-SM-32PKT 9.5
GTEX-ZVT3-0011-R5a-SM-51MSI 9.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 9.2
GTEX-1477Z-0011-R5b-SM-5PNUO 8.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 8.2
GTEX-XMD1-0011-R5A-SM-4AT47 8.0
GTEX-X261-0011-R5A-SM-3NMB4 6.9
GTEX-12WSH-0011-R5b-SM-5P9F3 6.8
GTEX-139TS-0011-R5b-SM-5J2MZ 6.7
GTEX-NPJ7-0011-R5a-SM-33HBK 6.5
GTEX-145MG-0011-R5b-SM-5S2VU 6.4
GTEX-1445S-0011-R5a-SM-5PNUS 6.3
GTEX-11UD1-0011-R5b-SM-5P9FP 6.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 5.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 5.9
GTEX-13CF2-0011-R5a-SM-5LZWS 5.8
GTEX-139T8-0011-R5b-SM-5J1MO 5.7
GTEX-S7PM-0011-R5A-SM-3NM8G 5.1
GTEX-13NZA-0011-R5b-SM-5KM4K 3.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

32.1

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 32.1
FF:10379-105H1 89 years, female 55.0
FF:10164-103B2 76 years, female 9.2

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