Tissue expression of SSB - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	120.0	TPM
GTEx:	22.2	RPKM
FANTOM5:	139.6	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Fibroblasts:	Medium
Peripheral nerve:	Medium
Chondrocytes:	Low

Antibody staining	Antibody HPA017287	Antibody CAB004643
Adipocytes	Low	High
Fibroblasts	Medium	Medium
Peripheral nerve	Medium	Medium
Chondrocytes	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Fibroblasts:	Medium
Peripheral nerve:	Low

Antibody staining	Antibody HPA017287	Antibody CAB004643
Adipocytes	Not detected	High
Fibroblasts	Medium
Peripheral nerve	Low

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	120.0

Female, age 80

Sample 1
TPM: 93.4

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 143.3

Female, age 57

Sample 3
TPM: 133.1

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 131.3

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 99.0

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	22.2

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 22.8

Samples: 350

Max RPKM: 56.5
Min RPKM: 11.7
Std RPKM: 6.2
Median RPKM: 21.5

GTEX-S7SF-1826-SM-3K2AD

56.5

GTEX-145ME-1926-SM-5SI9S

45.1

GTEX-TKQ1-1126-SM-4GIAZ

43.0

GTEX-14BMU-2126-SM-5S2TS

42.4

GTEX-O5YV-0226-SM-48TBY

40.5

GTEX-S3XE-1626-SM-3K2AJ

39.0

GTEX-ZQG8-1526-SM-5HL65

38.6

GTEX-PWCY-1926-SM-3NB25

37.5

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 21.3

Samples: 227

Max RPKM: 46.2
Min RPKM: 12
Std RPKM: 5.9
Median RPKM: 19.9

GTEX-131XG-0126-SM-5K7UJ

46.2

GTEX-WFJO-1026-SM-3GIKL

43.7

GTEX-ZF29-0826-SM-5S2NP

40.0

GTEX-111YS-1326-SM-5EGGK

38.9

GTEX-132QS-0826-SM-5K7WV

37.8

GTEX-Y5LM-0826-SM-4VDSW

37.4

GTEX-ZV6S-1626-SM-5NQ81

36.6

GTEX-ZTSS-1026-SM-5985N

36.5

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	139.6

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 139.6

FF:10010-101C1

65,65,76 years, mixed

139.6