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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:54.3TPM
GTEx:11.0RPKM
FANTOM5:82.2Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:High
 

Antibody staining

Antibody HPA017287

  

Antibody CAB004643

  

Squamous epithelial cells

 Medium   High  
   
   
   

ESOPHAGUS - HPA RNA-seq

Average TPM

54.3
overview Female, age 70
Sample 1
TPM: 48.6
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 64.2
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 50.2
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

11.0

GTEx sample id

RPKM
 

Esophagus - Mucosa
Esophagus - Mucosa
RPKM: 11.0
Samples: 286

Max RPKM: 22.7
Min RPKM: 3.9
Std RPKM: 2.8
Median RPKM: 10.7
GTEX-RUSQ-0826-SM-47JWW 22.7
GTEX-13X6I-1026-SM-5LU4C 21.4
GTEX-Y111-1626-SM-57WCY 20.9
GTEX-NPJ8-1926-SM-3MJGB 20.0
GTEX-133LE-0626-SM-5IFFJ 19.4
GTEX-TMMY-1126-SM-4DXSX 18.3
GTEX-RU72-0726-SM-46MUW 18.2
GTEX-14BMU-0926-SM-5S2QB 17.8
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

82.2

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 82.2
FF:10015-101C6 68,74,75 years, mixed 82.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.