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TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:84.4TPM
GTEx:14.1RPKM
FANTOM5:109.9Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:High
Cells in white pulp:Medium
 

Antibody staining

Antibody HPA017287

 

Antibody CAB004643

 

Cells in red pulp

High   High  

Cells in white pulp

High   Medium  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

84.4

overview Female, age 60
Sample 1
TPM: 82.2
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 64.9
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 80.0
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 77.7
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 117.0
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

14.1

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 14.1
Samples: 104

Max RPKM: 21.1
Min RPKM: 10.3
Std RPKM: 2.2
Median RPKM: 13.8
GTEX-XV7Q-0126-SM-4BRVK 21.1
GTEX-ZAB5-0526-SM-5CVMU 19.4
GTEX-131XE-1126-SM-5EGHW 19.0
GTEX-ZYWO-0226-SM-5GZX3 18.9
GTEX-13S86-0126-SM-5S2PI 18.2
GTEX-ZP4G-0326-SM-4YCEF 18.2
GTEX-131XG-0426-SM-5IFGD 18.0
GTEX-ZPU1-1026-SM-4YCEQ 17.7
GTEX-13FH7-1326-SM-5IFG8 17.5
GTEX-Y5LM-0326-SM-4VBRN 17.1
GTEX-12WSG-0926-SM-5EGIH 16.7
GTEX-XXEK-0126-SM-4BRVU 16.4
GTEX-139T6-0226-SM-5IFGZ 16.3
GTEX-13CF3-0226-SM-5J1NW 16.3
GTEX-QMRM-0226-SM-4R1K7 16.3
GTEX-XMK1-0126-SM-4B65F 16.3
GTEX-13PVR-0326-SM-5RQJY 16.2
GTEX-WHWD-0126-SM-4OORS 16.2
GTEX-117YX-2126-SM-5GIEL 16.1
GTEX-R55G-0226-SM-48FEI 16.0
GTEX-11NSD-0426-SM-5N9CR 15.8
GTEX-13N11-0126-SM-5KM2Z 15.8
GTEX-1399S-0226-SM-5IFFG 15.6
GTEX-11P81-1326-SM-5GU5S 15.5
GTEX-13VXT-1326-SM-5LU3Y 15.5
GTEX-11DXX-0726-SM-5H12X 15.4
GTEX-139YR-0426-SM-5IFFV 15.3
GTEX-146FQ-0626-SM-5LU9U 15.3
GTEX-146FR-1926-SM-5NQA6 15.3
GTEX-U4B1-0526-SM-4DXTK 15.2
GTEX-VJYA-0126-SM-4KL1P 15.2
GTEX-YB5E-0426-SM-5IFHR 15.2
GTEX-132QS-0226-SM-5IFFZ 15.1
GTEX-1399R-0226-SM-5IJGG 15.1
GTEX-ZVZP-0726-SM-59HKA 15.1
GTEX-O5YT-0926-SM-48TDG 15.0
GTEX-11VI4-0126-SM-5GU6Z 14.9
GTEX-XPVG-0626-SM-4B65B 14.8
GTEX-ZDTT-1026-SM-5KM19 14.8
GTEX-1211K-0426-SM-5FQTP 14.7
GTEX-13U4I-1626-SM-5IFFR 14.6
GTEX-11P7K-0426-SM-5BC5H 14.3
GTEX-UPK5-1626-SM-4JBHI 14.3
GTEX-12WSN-0126-SM-5DUX5 14.2
GTEX-OIZH-0926-SM-48TBR 14.2
GTEX-OOBJ-0926-SM-48TDO 14.2
GTEX-YFCO-0926-SM-5LUA5 14.2
GTEX-13PL7-1126-SM-5MR5O 14.1
GTEX-11EQ9-0426-SM-5A5JY 14.0
GTEX-147F3-0126-SM-5NQBJ 14.0
GTEX-ZLWG-0426-SM-4WWFA 13.9
GTEX-11XUK-0426-SM-5EQML 13.8
GTEX-PW2O-0126-SM-48TC8 13.8
GTEX-QV44-0126-SM-4R1KH 13.8
GTEX-T5JW-0126-SM-4DM6K 13.8
GTEX-ZZPU-0126-SM-5E446 13.8
GTEX-12BJ1-0726-SM-5EGGF 13.7
GTEX-ZLFU-0526-SM-4WWBN 13.7
GTEX-ZYFG-0726-SM-5GIDX 13.7
GTEX-1122O-0526-SM-5N9DM 13.6
GTEX-12WSK-0126-SM-5GCO7 13.6
GTEX-13111-0126-SM-5EGHO 13.5
GTEX-U3ZH-0126-SM-4DXUK 13.5
GTEX-YB5K-1926-SM-4VDT4 13.5
GTEX-Q2AH-0226-SM-48U1I 13.4
GTEX-Y8LW-0126-SM-4VBS1 13.4
GTEX-14DAR-0326-SM-5S2PS 13.3
GTEX-XGQ4-0126-SM-4AT4H 13.3
GTEX-Q734-0226-SM-48U1A 13.2
GTEX-P4QS-0926-SM-48TBS 13.1
GTEX-14E6E-1226-SM-5S2R5 13.0
GTEX-RUSQ-0126-SM-47JWV 13.0
GTEX-U3ZN-0126-SM-4DXUM 13.0
GTEX-POMQ-0126-SM-48TD6 12.9
GTEX-XAJ8-0126-SM-47JYG 12.8
GTEX-QDVN-0526-SM-48TZ4 12.7
GTEX-XQ8I-1726-SM-4BOQB 12.7
GTEX-Y3IK-0126-SM-4WWE9 12.7
GTEX-ZV6S-0826-SM-5NQ6Z 12.6
GTEX-UJHI-0126-SM-4IHLP 12.5
GTEX-QV31-0126-SM-447BP 12.4
GTEX-W5WG-0626-SM-4SOID 12.4
GTEX-144GN-2126-SM-5O99D 12.3
GTEX-145MN-0126-SM-5RQHY 12.3
GTEX-Y114-0726-SM-4TT6U 12.1
GTEX-QLQW-0126-SM-447BK 12.0
GTEX-Z9EW-0726-SM-5HL9H 12.0
GTEX-P4PP-0926-SM-48TBZ 11.7
GTEX-X585-1826-SM-4QAS3 11.6
GTEX-11LCK-0126-SM-5A5M5 11.5
GTEX-PLZ6-0126-SM-48TC6 11.5
GTEX-X4LF-0226-SM-4QAS8 11.3
GTEX-PX3G-0926-SM-48U12 11.2
GTEX-S4Z8-0226-SM-4AD5K 11.1
GTEX-XUJ4-0226-SM-4BOP8 11.0
GTEX-13X6H-0726-SM-5Q5BX 10.9
GTEX-ZVP2-0526-SM-51MSC 10.9
GTEX-12WSJ-0526-SM-5GCOZ 10.7
GTEX-WFON-0126-SM-4LVM9 10.7
GTEX-Y3I4-0126-SM-4TT26 10.6
GTEX-YEC4-0126-SM-4W21T 10.5
GTEX-QCQG-0226-SM-48U28 10.3
GTEX-S3XE-0626-SM-4AD6B 10.3
GTEX-X3Y1-0126-SM-4PQZA 10.3
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

109.9

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 109.9
FF:10025-101D7 39,50,70 years, male 109.9

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