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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:53.1RPKM
FANTOM5:200.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA010631

 

Glial cells

Not detected  

Neuronal cells

Not detected  
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

53.1

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 53.1
Samples: 117

Max RPKM: 97.2
Min RPKM: 6.9
Std RPKM: 23.9
Median RPKM: 58.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 97.2
GTEX-13VXU-0011-R5a-SM-5O9D7 92.3
GTEX-13G51-0011-R5a-SM-5L3EB 87.8
GTEX-145MH-0011-R5a-SM-5P9JT 87.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 87.3
GTEX-13SLX-0011-R5a-SM-5O9BV 85.8
GTEX-13FXS-0011-R5b-SM-5LZYE 85.3
GTEX-TSE9-0011-R5A-SM-3DB7J 84.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 84.4
GTEX-131YS-0011-R5b-SM-5K7YB 84.3
GTEX-13X6K-0011-R5b-SM-5PNUE 84.2
GTEX-12WSC-0011-R5b-SM-5CVNS 83.8
GTEX-14BIM-0011-R5b-SM-5S2RM 83.8
GTEX-1313W-0011-R5b-SM-5L3EP 83.0
GTEX-13X6J-0011-R5b-SM-5PNWT 82.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 82.6
GTEX-1399T-0011-R5b-SM-5IJDK 80.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 78.3
GTEX-ZUA1-0011-R5b-SM-51MTG 78.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 77.7
GTEX-11GSP-0011-R5a-SM-57WBE 77.5
GTEX-RU72-0011-R5A-SM-2TF6U 77.2
GTEX-145LS-0011-R5a-SM-5SI65 76.3
GTEX-WHSE-0011-R5A-SM-3P5ZO 76.0
GTEX-N7MS-0011-R5a-SM-2HMK8 75.6
GTEX-14ABY-0011-R5b-SM-5SI7B 73.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 72.7
GTEX-UTHO-0011-R5A-SM-3GIJD 72.6
GTEX-13FLW-0011-R5a-SM-5LZX6 72.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 72.1
GTEX-13OVL-0011-R5b-SM-5L3FU 71.6
GTEX-T6MN-0011-R5A-SM-32QPD 70.7
GTEX-T5JC-0011-R5A-SM-32PLK 70.5
GTEX-11H98-0011-R5b-SM-57WCF 70.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 70.0
GTEX-13OW7-0011-R5b-SM-5O9DM 69.3
GTEX-13O3O-0011-R5b-SM-5KM44 68.7
GTEX-N7MT-0011-R5a-SM-2I3G6 67.9
GTEX-11OF3-0011-R5a-SM-57WB4 67.7
GTEX-13OW6-0011-R5a-SM-5O9BK 67.6
GTEX-QVJO-0011-R5A-SM-2S1QM 67.6
GTEX-WZTO-0011-R5B-SM-3NMC5 67.0
GTEX-X585-0011-R5A-SM-46MVI 66.7
GTEX-12WSF-0011-R5a-SM-5HL8K 66.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 66.1
GTEX-S7SE-0011-R5A-SM-2XCDA 65.0
GTEX-132Q8-0011-R5a-SM-5IJDM 63.9
GTEX-13CZV-0011-R5a-SM-5K7XA 62.8
GTEX-WVLH-0011-R5A-SM-3MJFW 62.3
GTEX-11NV4-0011-R5a-SM-5NQ88 62.2
GTEX-13S7M-0011-R5b-SM-5P9HS 61.8
GTEX-RVPV-0011-R5A-SM-2TF69 61.6
GTEX-13NYB-0011-R5a-SM-5MR45 60.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 59.7
GTEX-WWYW-0011-R5A-SM-3NB3E 59.6
GTEX-13JUV-0011-R5a-SM-5LZY5 59.0
GTEX-WL46-0011-R5A-SM-3LK6V 59.0
GTEX-OHPN-0011-R5A-SM-2I5FF 58.5
GTEX-P44H-0011-R5A-SM-2XCEX 58.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 57.9
GTEX-13OVH-0011-R5b-SM-5KM4L 55.7
GTEX-NL4W-0011-R5a-SM-2I3GD 55.6
GTEX-Z93S-0011-R5b-SM-4RGNI 55.3
GTEX-13NYS-0011-R5a-SM-5MR4D 55.2
GTEX-13OW5-0011-R5b-SM-5L3FR 54.6
GTEX-12WSD-0011-R5b-SM-5CVNG 52.4
GTEX-RVPU-0011-R5A-SM-2XCAD 51.7
GTEX-ZE7O-0011-R5a-SM-57WBO 51.2
GTEX-R55E-0011-R5A-SM-2TC5N 50.2
GTEX-139TT-0011-R5b-SM-5K7W8 49.3
GTEX-13X6I-0011-R5a-SM-5PNWW 49.3
GTEX-13FLV-0011-R5a-SM-5LZWT 48.7
GTEX-PVOW-0011-R5A-SM-32PL7 48.5
GTEX-T2IS-0011-R5A-SM-32QP4 46.8
GTEX-14BIN-0011-R5b-SM-5SI78 46.5
GTEX-12ZZX-0011-R5a-SM-5HL89 44.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 44.4
GTEX-ZXG5-0011-R5b-SM-57WBN 44.1
GTEX-XOTO-0011-R5A-SM-4B657 42.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 37.7
GTEX-12WSB-0011-R5b-SM-5GU67 37.0
GTEX-XMD1-0011-R5A-SM-4AT47 36.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 35.6
GTEX-NL3H-0011-R5a-SM-2I3GB 35.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 34.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 33.7
GTEX-OXRN-0011-R5A-SM-2I5EF 33.5
GTEX-13CIG-0011-R5b-SM-5L3F2 33.4
GTEX-13JVG-0011-R5a-SM-5MR4O 32.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 30.1
GTEX-144GO-0011-R5a-SM-5PNUR 29.8
GTEX-YJ89-0011-R5a-SM-4V6GM 26.4
GTEX-12WSH-0011-R5b-SM-5P9F3 26.1
GTEX-QMR6-0011-R5A-SM-32PKT 26.0
GTEX-X4XX-0011-R5A-SM-46MWN 24.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 23.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 22.0
GTEX-11WQC-0011-R5a-SM-5BC74 21.8
GTEX-ZV68-0011-R5a-SM-4YCDW 21.3
GTEX-144GL-0011-R5b-SM-5PNUJ 21.2
GTEX-ZVT3-0011-R5a-SM-51MSI 21.0
GTEX-13FHP-0011-R5b-SM-5LZY2 18.4
GTEX-X261-0011-R5A-SM-3NMB4 18.0
GTEX-13112-0011-R5b-SM-5DUV8 17.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 17.6
GTEX-12WSA-0011-R5b-SM-5GU5I 15.6
GTEX-NPJ7-0011-R5a-SM-33HBK 15.2
GTEX-1445S-0011-R5a-SM-5PNUS 15.1
GTEX-139TS-0011-R5b-SM-5J2MZ 14.8
GTEX-1477Z-0011-R5b-SM-5PNUO 14.2
GTEX-13CF2-0011-R5a-SM-5LZWS 12.5
GTEX-S7PM-0011-R5A-SM-3NM8G 10.5
GTEX-139T8-0011-R5b-SM-5J1MO 8.6
GTEX-11UD1-0011-R5b-SM-5P9FP 8.2
GTEX-145MG-0011-R5b-SM-5S2VU 7.8
GTEX-13NZA-0011-R5b-SM-5KM4K 6.9
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

200.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 200.5
FF:10164-103B2 76 years, female 220.0
FF:10379-105H1 89 years, female 181.1

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