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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:64.5TPM
GTEx:49.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Low
Neuronal cells:High
Neuropil:Medium
 

Antibody staining

Antibody HPA010631

 

Endothelial cells

Not detected  

Glial cells

Low  

Neuronal cells

High  

Neuropil

Medium  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

64.5

N/A Male, age 5
Sample 1
TPM: 66.8
overview Female, age 40
Sample 2
TPM: 54.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 72.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

49.6

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 46.2
Samples: 114

Max RPKM: 74.8
Min RPKM: 14.5
Std RPKM: 12.3
Median RPKM: 47.5
GTEX-Z93S-2926-SM-57WB9 74.8
GTEX-131YS-3126-SM-5KLYT 72.3
GTEX-13NYC-2826-SM-5K7WR 67.7
GTEX-117XS-3026-SM-5N9CA 67.1
GTEX-11DXY-3226-SM-5GIDE 64.8
GTEX-13FXS-3126-SM-5J2NN 64.5
GTEX-12ZZX-2926-SM-5GCOQ 63.0
GTEX-14BMV-3026-SM-5S2PQ 62.5
GTEX-145LS-3126-SM-5Q5BY 61.5
GTEX-T5JC-2426-SM-3NMDB 60.9
GTEX-13SLX-3126-SM-5S2Q5 60.8
GTEX-11NUK-2926-SM-5A5MD 60.7
GTEX-11ZUS-2926-SM-5FQSL 60.2
GTEX-13O3O-3126-SM-5KM3H 59.7
GTEX-145MG-3026-SM-5RQJA 59.3
GTEX-13NYS-3126-SM-5KLYV 59.0
GTEX-13O3Q-2926-SM-5KM45 58.7
GTEX-145MH-3026-SM-5Q5DZ 58.4
GTEX-14ASI-3026-SM-5S2PN 57.8
GTEX-ZVT3-3026-SM-5E43N 57.7
GTEX-132Q8-3026-SM-5PNVG 57.5
GTEX-WHSE-3026-SM-3P5ZH 57.4
GTEX-X585-3026-SM-46MWF 57.2
GTEX-13OVH-3026-SM-5MR4N 56.4
GTEX-1399T-3026-SM-5KLZC 56.1
GTEX-12126-1026-SM-5P9JJ 56.0
GTEX-WL46-2926-SM-3LK82 55.7
GTEX-12WSC-3026-SM-5GCNF 55.6
GTEX-1313W-3126-SM-5LZUI 55.4
GTEX-YJ89-3026-SM-5IFJI 55.4
GTEX-13PL6-3126-SM-5LUAR 55.3
GTEX-X4XX-3026-SM-3NMB2 55.2
GTEX-XLM4-3026-SM-4AT6L 54.3
GTEX-TSE9-3026-SM-3DB76 54.2
GTEX-YFC4-3126-SM-5PNV6 53.9
GTEX-11GSO-2926-SM-5HL73 53.5
GTEX-RNOR-2326-SM-2TF4I 53.3
GTEX-11PRG-2926-SM-5987A 53.1
GTEX-RU72-3026-SM-5SI7Y 52.8
GTEX-WVLH-3026-SM-3MJG9 52.7
GTEX-WWYW-3126-SM-3NB39 52.4
GTEX-12WSH-3026-SM-5CVNI 50.7
GTEX-XOTO-3026-SM-4B65M 50.5
GTEX-ZYFD-3026-SM-5E44C 50.5
GTEX-T6MN-2626-SM-32PMQ 50.4
GTEX-13FLW-1426-SM-5K7YE 50.3
GTEX-13VXU-2926-SM-5LU5C 50.2
GTEX-11DXW-1126-SM-5H12Q 49.9
GTEX-13OW6-3026-SM-5J2MI 49.9
GTEX-WZTO-2926-SM-3NM9I 49.9
GTEX-Y8DK-0826-SM-4TT3T 49.7
GTEX-1128S-2726-SM-5H12C 49.3
GTEX-ZUA1-3026-SM-59HJC 48.5
GTEX-R55F-1326-SM-5S2V4 48.4
GTEX-13QIC-2926-SM-5J2NF 48.2
GTEX-QVJO-1426-SM-2S1QY 47.9
GTEX-ZAK1-3026-SM-5S2MJ 47.8
GTEX-ZZPT-3026-SM-5GZXH 47.1
GTEX-144GL-3026-SM-5Q5CW 46.9
GTEX-ZE7O-3126-SM-5HL5X 46.5
GTEX-13FHO-3026-SM-5J1O9 46.2
GTEX-13S7M-3126-SM-5RQJQ 46.2
GTEX-131XW-3126-SM-5LZUC 45.7
GTEX-14A5I-2926-SM-5Q5CQ 45.5
GTEX-11ONC-2926-SM-5P9JM 45.4
GTEX-11EMC-3226-SM-5EGKW 45.1
GTEX-12ZZW-2926-SM-5LZUP 44.9
GTEX-Y111-2726-SM-4TT3N 44.8
GTEX-13FHP-3026-SM-5IJBS 43.9
GTEX-PVOW-2526-SM-2XCF7 43.9
GTEX-11OF3-2926-SM-5HL78 43.7
GTEX-12ZZY-3026-SM-5GCOU 43.4
GTEX-1192X-3126-SM-5N9BY 42.9
GTEX-ZAJG-3126-SM-5HL9J 42.9
GTEX-12ZZZ-3026-SM-5BC67 42.1
GTEX-QMR6-1426-SM-32PLA 42.1
GTEX-11EI6-3026-SM-5GZZO 42.0
GTEX-13NYB-3026-SM-5IJD7 40.8
GTEX-13X6K-2926-SM-5Q5D5 40.2
GTEX-NPJ8-1526-SM-2D7VU 39.9
GTEX-OXRN-2426-SM-2I5EQ 39.8
GTEX-11OC5-0726-SM-5P9JK 39.5
GTEX-12WSD-3126-SM-5HL7P 39.5
GTEX-Q2AG-2926-SM-2HMJ3 39.5
GTEX-T2IS-3026-SM-32QPM 39.3
GTEX-11O72-2926-SM-5BC4V 38.0
GTEX-145MF-2726-SM-5O995 37.8
GTEX-UTHO-3026-SM-3GAFB 37.8
GTEX-13OW8-2826-SM-5L3GC 37.6
GTEX-NPJ7-2726-SM-2I3FT 36.9
GTEX-13X6J-3026-SM-5Q5CU 36.8
GTEX-13JVG-3126-SM-5L3FH 36.4
GTEX-139T8-1026-SM-5J2MC 35.7
GTEX-11GS4-3126-SM-5A5LH 35.6
GTEX-111FC-3126-SM-5GZZ2 34.3
GTEX-11NV4-2126-SM-5N9DS 33.6
GTEX-13OW7-3026-SM-5L3GY 32.0
GTEX-QDT8-2926-SM-32PKC 31.7
GTEX-QVUS-2826-SM-3GADB 31.7
GTEX-11WQK-3026-SM-5EQL6 31.6
GTEX-13OVJ-2826-SM-5L3GW 31.0
GTEX-13PVQ-3026-SM-5SI93 30.7
GTEX-1117F-3226-SM-5N9CT 28.8
GTEX-13JUV-2926-SM-5LZX7 28.4
GTEX-11GSP-3226-SM-5986O 27.4
GTEX-147GR-3026-SM-5S2ML 26.7
GTEX-144FL-3026-SM-5O99C 26.1
GTEX-13IVO-2926-SM-5L3CZ 24.9
GTEX-11TTK-2926-SM-5PNYP 23.2
GTEX-1445S-3026-SM-5O9BR 19.1
GTEX-PWO3-0926-SM-2I5EY 18.8
GTEX-N7MT-1126-SM-5SI7V 18.6
GTEX-12WSA-2926-SM-5EQ4D 15.3
GTEX-13G51-3026-SM-5IJB8 14.5
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 53.3
Samples: 108

Max RPKM: 92.4
Min RPKM: 18.6
Std RPKM: 17.3
Median RPKM: 55.4
GTEX-13SLX-0011-R10a-SM-5P9HV 92.4
GTEX-13N1W-0011-R10b-SM-5MR4H 83.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 81.9
GTEX-13NYS-0011-R10a-SM-5MR4S 80.7
GTEX-13OW7-0011-R10a-SM-5L3H3 80.4
GTEX-NL3H-0011-R10A-SM-2I3E9 78.6
GTEX-NPJ8-0011-R10A-SM-2YUMO 77.5
GTEX-12WSE-0011-R10b-SM-5P9JV 75.8
GTEX-131XH-0011-R10a-SM-5EGLJ 75.8
GTEX-13X6K-0011-R10a-SM-5P9JR 75.4
GTEX-1313W-0011-R10b-SM-5DUXA 74.7
GTEX-13RTJ-0011-R10b-SM-5O9CW 73.6
GTEX-12WSH-0011-R10a-SM-5LZUS 73.3
GTEX-13O3O-0011-R10a-SM-5LUA9 73.1
GTEX-13O3Q-0011-R10b-SM-5KM39 71.9
GTEX-12WSF-0011-R10a-SM-5LZVH 71.5
GTEX-ZVZQ-0011-R10b-SM-51MRT 71.4
GTEX-14BIN-0011-R10a-SM-5S2UA 70.5
GTEX-145MG-0011-R10a-SM-5PNWG 69.8
GTEX-X585-0011-R10A-SM-46MUY 69.0
GTEX-Z93S-0011-R10a-SM-4RGNM 68.9
GTEX-13OW6-0011-R10a-SM-5L3HE 68.1
GTEX-13CZV-0011-R10b-SM-5LZYD 67.3
GTEX-14BIL-0011-R10a-SM-5SI75 67.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 66.8
GTEX-13QIC-0011-R10a-SM-5O9C7 66.5
GTEX-ZF28-0011-R10a-SM-4WWEH 66.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC 66.0
GTEX-X4XX-0011-R10B-SM-46MWO 65.8
GTEX-13S7M-0011-R10b-SM-5PNZB 65.3
GTEX-WZTO-0011-R10B-SM-4E3KB 64.5
GTEX-145LS-0011-R10a-SM-5PNUQ 63.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 63.7
GTEX-ZVT3-0011-R10b-SM-57WB6 62.9
GTEX-11H98-0011-R10b-SM-5NQ98 62.7
GTEX-12WSC-0011-R10a-SM-5GU57 62.7
GTEX-12ZZY-0011-R10b-SM-5HL7W 62.4
GTEX-Y8DK-0011-R10A-SM-4SOK1 62.2
GTEX-13FHO-0011-R10b-SM-5J2MM 62.1
GTEX-147GR-0011-R10b-SM-5S2UM 61.9
GTEX-YJ89-0011-R10a-SM-4SOK9 61.4
GTEX-13FXS-0011-R10a-SM-5J2MA 61.1
GTEX-N7MS-0011-R10A-SM-2HMJK 60.8
GTEX-131YS-0011-R10b-SM-5EQ5N 60.4
GTEX-N7MT-0011-R10A-SM-2I3E1 60.4
GTEX-T5JC-0011-R10A-SM-32PM2 60.4
GTEX-13X6J-0011-R10b-SM-5PNWA 59.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 59.2
GTEX-145MH-0011-R10b-SM-5PNUK 58.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 58.6
GTEX-13FLV-0011-R10b-SM-5LZZ2 58.3
GTEX-YFC4-0011-R10a-SM-4SOK5 57.3
GTEX-WL46-0011-R10A-SM-3MJFQ 55.7
GTEX-TSE9-0011-R10A-SM-3DB7O 55.5
GTEX-13OVL-0011-R10a-SM-5L3GS 55.2
GTEX-OXRN-0011-R10A-SM-2I5GC 54.3
GTEX-13QJC-0011-R10a-SM-5SI63 53.7
GTEX-T6MN-0011-R10A-SM-32QP7 53.6
GTEX-S7SE-0011-R10A-SM-2XCDF 53.4
GTEX-12WSM-0011-R10a-SM-5DUWV 52.3
GTEX-13FLW-0011-R10b-SM-5LZZF 52.1
GTEX-X4EP-0011-R10B-SM-4QASJ 52.1
GTEX-13NYB-0011-R10a-SM-5KM43 51.5
GTEX-147F4-0011-R10b-SM-5S2WC 51.5
GTEX-13X6I-0011-R10a-SM-5PNWI 50.8
GTEX-XLM4-0011-R10A-SM-4AT5P 50.7
GTEX-145LU-0011-R10a-SM-5PNWJ 50.0
GTEX-ZAB4-0011-R10a-SM-4SOKH 50.0
GTEX-WVLH-0011-R10A-SM-3MJFM 49.8
GTEX-WWYW-0011-R10A-SM-3NB35 49.7
GTEX-11WQC-0011-R10a-SM-57WCT 47.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 47.7
GTEX-13OW8-0011-R10a-SM-5L3H6 47.4
GTEX-RVPU-0011-R10A-SM-2XCAH 47.1
GTEX-QMR6-0011-R10A-SM-32PKO 46.3
GTEX-13FTZ-0011-R10b-SM-5KLZS 45.7
GTEX-QDT8-0011-R10A-SM-32PKG 44.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 44.3
GTEX-12126-0011-R10b-SM-5BC6T 44.0
GTEX-13NZA-0011-R10b-SM-5KM54 42.4
GTEX-13SLW-0011-R10a-SM-5S2UI 41.5
GTEX-13G51-0011-R10b-SM-5LZYF 41.3
GTEX-13JUV-0011-R10b-SM-5LZXR 40.1
GTEX-X261-0011-R10B-SM-4E3JT 37.9
GTEX-ZXG5-0011-R10a-SM-57WDD 37.8
GTEX-QVUS-0011-R10A-SM-3GIK3 37.0
GTEX-ZUA1-0011-R10a-SM-51MT6 36.7
GTEX-P44H-0011-R10A-SM-2XCEK 35.9
GTEX-NL4W-0011-R10A-SM-2I3DY 33.1
GTEX-13N2G-0011-R10a-SM-5MR34 31.8
GTEX-139TS-0011-R10a-SM-5K7TU 31.0
GTEX-OXRO-0011-R10A-SM-2I5EH 30.6
GTEX-12ZZW-0011-R10b-SM-5HL9X 30.3
GTEX-11GSP-0011-R10a-SM-5NQ7J 30.1
GTEX-13OVJ-0011-R10b-SM-5L3HT 29.7
GTEX-13IVO-0011-R10a-SM-5LZY3 27.8
GTEX-11ZUS-0011-R10b-SM-5BC79 26.7
GTEX-11WQK-0011-R10a-SM-5BC6R 26.5
GTEX-14753-0011-R10b-SM-5S2WE 24.1
GTEX-12WSA-0011-R10b-SM-5P9ET 22.1
GTEX-13JVG-0011-R10b-SM-5KM2P 22.1
GTEX-1477Z-0011-R10b-SM-5S2RF 22.1
GTEX-131XW-0011-R10a-SM-5DUVA 21.6
GTEX-ZV68-0011-R10a-SM-51MT7 21.2
GTEX-XMD1-0011-R10A-SM-4AT4A 21.1
GTEX-ZE7O-0011-R10a-SM-57WAZ 20.7
GTEX-12WSD-0011-R10b-SM-5GU79 19.0
GTEX-1445S-0011-R10a-SM-5PNWB 18.6
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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