Fields »
ABOUT
HELP
BLOG
AMIGO2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:12.2TPM
GTEx:7.1RPKM
FANTOM5:5.4Tags Per Million

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA054004

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

12.2
N/A Female, age 80
Sample 1
TPM: 9.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 9.6
N/A Female, age 57
Sample 3
TPM: 7.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 21.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 13.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

7.1

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 6.9
Samples: 350

Max RPKM: 30.5
Min RPKM: 1
Std RPKM: 4.3
Median RPKM: 5.7
GTEX-QEG4-0326-SM-5S2UQ 30.5
GTEX-13QJ3-0426-SM-5RQHP 27.5
GTEX-145MF-0526-SM-5LUA6 26.4
GTEX-XQ3S-1626-SM-4WAYN 25.3
GTEX-13U4I-0226-SM-5SIB1 24.0
GTEX-13OW6-0526-SM-5L3HY 22.6
GTEX-SIU8-0226-SM-2XCDS 22.6
GTEX-14C5O-0226-SM-5SI6O 21.9
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 7.5
Samples: 227

Max RPKM: 52.4
Min RPKM: 2.7
Std RPKM: 4.7
Median RPKM: 6.3
GTEX-13OW7-1126-SM-5K7V6 52.4
GTEX-11ZUS-1826-SM-5FQTR 28.4
GTEX-WOFM-0726-SM-3MJF8 23.0
GTEX-11DXX-2026-SM-5EGJL 20.7
GTEX-147JS-1026-SM-5S2MP 18.9
GTEX-145LU-1226-SM-5LU9B 15.8
GTEX-X585-2526-SM-4QAS1 15.6
GTEX-1212Z-0526-SM-5FQSQ 15.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

5.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 5.4
FF:10010-101C1 65,65,76 years, mixed 5.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.