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Gene name

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Method

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Expression

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Specificity

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Detectable

Cell line

Detectable

Category

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Score

Score

Antibodies

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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:32.0TPM
GTEx:16.7RPKM
FANTOM5:3.1Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Low
Myoepithelial cells:Low
 

Antibody staining

Antibody HPA054004

 

Adipocytes

Not detected  

Glandular cells

Low  

Myoepithelial cells

Low  
 
 
 

BREAST - HPA RNA-seq

Average TPM

32.0

overview Female, age 52
Sample 1
TPM: 21.4
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 32.2
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 46.6
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 27.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

16.7

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 16.7
Samples: 214

Max RPKM: 85.3
Min RPKM: 2.5
Std RPKM: 15.2
Median RPKM: 11.7
GTEX-13PL6-2926-SM-5L3I2 85.3
GTEX-XOT4-0726-SM-4GIAW 80.3
GTEX-RU72-0626-SM-46MUI 74.4
GTEX-R3RS-0626-SM-48FE1 69.9
GTEX-13FTY-2226-SM-5J1ND 68.6
GTEX-12ZZX-1126-SM-5EGKB 67.6
GTEX-11PRG-0826-SM-5EQ6A 67.1
GTEX-13O3O-0826-SM-5K7WE 58.6
GTEX-Q2AG-0326-SM-48U1O 55.3
GTEX-WYVS-1726-SM-3NMAY 55.1
GTEX-WYBS-0926-SM-3NM94 48.6
GTEX-VJWN-0726-SM-3GIJ8 47.9
GTEX-131YS-0626-SM-5EGKL 43.2
GTEX-Y3IK-2326-SM-4WWDT 41.1
GTEX-13113-1726-SM-5GCOO 40.5
GTEX-11WQC-1726-SM-5GU4W 40.3
GTEX-YFC4-1426-SM-5IFJG 40.1
GTEX-Y5V5-2126-SM-4WWFO 38.4
GTEX-T2IS-1526-SM-32QPR 37.6
GTEX-ZF2S-2026-SM-5E461 37.5
GTEX-ZXES-0826-SM-5E43C 36.1
GTEX-11P81-1926-SM-5BC53 34.9
GTEX-ZC5H-2626-SM-5J2MG 34.8
GTEX-131XW-0726-SM-5EGK3 34.6
GTEX-13N11-1726-SM-5J1OJ 33.3
GTEX-WRHU-0326-SM-3MJFY 32.7
GTEX-ZVT2-1826-SM-5NQ8W 29.1
GTEX-WXYG-2226-SM-4E3IM 28.8
GTEX-ZF29-1926-SM-5S2P1 28.8
GTEX-13QIC-2326-SM-5LU5N 28.7
GTEX-139T8-0826-SM-5L3DE 28.4
GTEX-11EMC-2026-SM-5A5JV 28.3
GTEX-QDT8-0626-SM-48TYW 28.0
GTEX-ZV7C-1826-SM-5NQ83 28.0
GTEX-X15G-1626-SM-3NMB3 27.9
GTEX-TMMY-0726-SM-33HBE 26.6
GTEX-ZF3C-2326-SM-5S2MZ 26.1
GTEX-14AS3-1626-SM-5S2OY 26.0
GTEX-WI4N-1426-SM-3LK7H 25.9
GTEX-11GS4-2126-SM-5A5KR 25.1
GTEX-ZU9S-1926-SM-5NQBP 25.1
GTEX-Y5LM-1726-SM-4VDSX 25.0
GTEX-11DXW-0626-SM-5N9ER 24.7
GTEX-S4P3-1326-SM-4AD6V 24.7
GTEX-RWS6-1926-SM-47JXY 24.3
GTEX-14ABY-2126-SM-5QGQZ 24.1
GTEX-T6MN-0726-SM-32PML 24.0
GTEX-W5X1-2326-SM-3GIL6 24.0
GTEX-Y111-2026-SM-4SOJA 22.7
GTEX-ZVTK-0326-SM-51MRR 22.4
GTEX-ZVT4-1026-SM-57WC4 22.2
GTEX-147F4-2826-SM-5NQBN 21.8
GTEX-1399U-1826-SM-5PNZ1 21.7
GTEX-UJHI-1426-SM-3DB9C 21.3
GTEX-SE5C-2126-SM-4BRUJ 21.1
GTEX-13NZ8-0126-SM-5IJCT 20.4
GTEX-ZVZQ-0826-SM-51MRF 20.4
GTEX-Y3I4-1526-SM-4TT7K 20.2
GTEX-XUJ4-1926-SM-4BOOV 19.6
GTEX-12WSM-1726-SM-5BC6J 19.5
GTEX-1122O-1226-SM-5H113 19.1
GTEX-13W3W-1226-SM-5LU4H 19.1
GTEX-SIU7-1626-SM-4BRUK 18.9
GTEX-TML8-1226-SM-32QON 18.7
GTEX-11EI6-0626-SM-5985T 18.5
GTEX-T5JW-2026-SM-4DM63 18.3
GTEX-YJ8O-2226-SM-5IFHW 18.3
GTEX-ZY6K-1626-SM-5GZWV 18.3
GTEX-ZLV1-1426-SM-4WWES 18.1
GTEX-ZZPU-0626-SM-5E43T 18.1
GTEX-11P7K-0726-SM-5EGKX 17.8
GTEX-XMD2-0926-SM-4WWEF 17.8
GTEX-13NZB-2126-SM-5MR4Y 17.7
GTEX-13CF2-2026-SM-5K7VI 17.6
GTEX-ZEX8-2226-SM-57WC6 17.5
GTEX-11EM3-1326-SM-5N9C6 17.4
GTEX-146FH-0826-SM-5SI8T 17.4
GTEX-13OW5-2226-SM-5L3HC 17.2
GTEX-R55F-1726-SM-2TF4R 17.1
GTEX-1269C-2426-SM-5FQSN 16.8
GTEX-133LE-1726-SM-5K7VQ 16.8
GTEX-UPK5-2326-SM-3P5Z8 16.8
GTEX-ZAJG-0626-SM-5HL8X 16.8
GTEX-WYJK-1326-SM-3NB2T 16.7
GTEX-XUW1-2326-SM-4BOO5 16.7
GTEX-13NZ9-1026-SM-5MR5K 16.6
GTEX-T5JC-2126-SM-32PMO 15.8
GTEX-145LT-0726-SM-5S2VM 15.4
GTEX-QVJO-1826-SM-447C9 15.2
GTEX-13D11-1026-SM-5IJFB 14.9
GTEX-S4UY-0726-SM-4AD6X 14.9
GTEX-U3ZN-1926-SM-4DXSG 13.5
GTEX-1314G-1226-SM-5BC6D 13.4
GTEX-144GL-2026-SM-5LU3O 13.4
GTEX-VUSG-2226-SM-4KKZO 13.2
GTEX-S341-1526-SM-4AD6K 13.0
GTEX-ZVE2-1226-SM-5NQ8R 12.9
GTEX-12KS4-0126-SM-5Q5A5 12.8
GTEX-XMD1-0826-SM-4AT52 12.8
GTEX-U3ZH-1426-SM-4DXSR 12.7
GTEX-132Q8-1426-SM-5EGK7 12.3
GTEX-Y8LW-1626-SM-5IFHX 12.3
GTEX-11I78-2226-SM-5PNYA 12.2
GTEX-R53T-1526-SM-48FEK 12.1
GTEX-ZTTD-1026-SM-51MRD 11.9
GTEX-X4EP-2926-SM-3P5YQ 11.8
GTEX-ZYWO-2326-SM-5GZY4 11.8
GTEX-13W46-0826-SM-5LU3H 11.7
GTEX-1313W-0826-SM-5EQ4T 11.3
GTEX-Y114-2026-SM-4TT7L 11.3
GTEX-T6MO-0326-SM-32QOK 11.2
GTEX-13O3P-0826-SM-5L3DH 11.0
GTEX-XYKS-1326-SM-4BRUN 10.8
GTEX-11EQ9-1826-SM-5Q5AJ 10.7
GTEX-13O61-1826-SM-5KM4I 10.5
GTEX-XBED-1626-SM-47JYN 10.5
GTEX-11LCK-2426-SM-5HL5F 10.3
GTEX-XUZC-1626-SM-4BRVP 10.3
GTEX-139TU-0626-SM-5KM3X 10.2
GTEX-Y8E4-1626-SM-5S2MW 9.7
GTEX-ZV6S-1826-SM-5NQ8D 9.6
GTEX-ZZ64-1226-SM-5E43R 9.6
GTEX-ZUA1-1526-SM-59HLS 9.3
GTEX-T2YK-2226-SM-32QPT 9.2
GTEX-13OW8-0226-SM-5K7UP 9.1
GTEX-111YS-1926-SM-5GICC 8.9
GTEX-QEL4-2126-SM-447AE 8.9
GTEX-13CF3-2126-SM-5IFJP 8.8
GTEX-145MN-1926-SM-5SIAI 8.8
GTEX-UTHO-1026-SM-3GAF7 8.7
GTEX-ZT9W-2026-SM-51MRA 8.6
GTEX-ZTX8-1226-SM-4YCE9 8.6
GTEX-13FTX-1126-SM-5N9EN 8.4
GTEX-145MO-0826-SM-5NQBL 8.3
GTEX-TKQ2-1826-SM-33HB2 8.3
GTEX-WOFL-0826-SM-3MJG1 8.3
GTEX-ZPIC-1126-SM-5BC7F 8.2
GTEX-13S86-1226-SM-5S2OA 7.8
GTEX-144GM-0926-SM-5O994 7.8
GTEX-S33H-0326-SM-4AD6N 7.8
GTEX-11TT1-2126-SM-5GU5Y 7.5
GTEX-117YX-1426-SM-5H12H 7.3
GTEX-1192X-2326-SM-5987X 7.3
GTEX-ZWKS-2826-SM-5NQ74 7.3
GTEX-139T6-1626-SM-5PNYZ 7.2
GTEX-11TUW-1826-SM-5BC5D 7.1
GTEX-1211K-1926-SM-5EQLB 7.1
GTEX-YB5K-1626-SM-5IFIN 7.1
GTEX-YEC3-1026-SM-5IFI5 7.1
GTEX-XQ8I-2426-SM-4WAXY 7.0
GTEX-XMK1-1126-SM-4IHJ8 6.9
GTEX-11ONC-2126-SM-5HL6E 6.8
GTEX-12WSB-0626-SM-59HJO 6.8
GTEX-ZQUD-1926-SM-51MSA 6.8
GTEX-11DXY-2326-SM-5GICW 6.7
GTEX-13PVQ-1026-SM-5KM3M 6.7
GTEX-XV7Q-2326-SM-4BRVZ 6.7
GTEX-ZYT6-0126-SM-5E45J 6.7
GTEX-1117F-2826-SM-5GZXL 6.6
GTEX-13O3Q-2226-SM-5KM4O 6.6
GTEX-145ME-1526-SM-5Q5F2 6.5
GTEX-12WSK-2226-SM-5GCO5 6.4
GTEX-13N1W-0626-SM-5MR4U 6.4
GTEX-11WQK-2426-SM-5GU5C 6.3
GTEX-117XS-1926-SM-5GICO 6.1
GTEX-XQ3S-1326-SM-4BOPQ 6.1
GTEX-ZAB4-2526-SM-5HL8M 6.1
GTEX-S32W-2026-SM-4AD6E 6.0
GTEX-XGQ4-0926-SM-4AT4U 6.0
GTEX-Y9LG-1426-SM-5IFJZ 6.0
GTEX-S7SE-0826-SM-4AT4D 5.9
GTEX-14753-2426-SM-5LU8U 5.8
GTEX-11NV4-2026-SM-5N9DG 5.6
GTEX-11DXZ-1926-SM-5GZZL 5.4
GTEX-S4Q7-1126-SM-4AD6R 5.4
GTEX-X4XY-0926-SM-4E3JD 5.3
GTEX-QMRM-1626-SM-4R1KV 5.2
GTEX-12BJ1-1826-SM-5HL9N 5.0
GTEX-13FTW-1426-SM-5LZWZ 5.0
GTEX-YB5E-1726-SM-5IFJ3 5.0
GTEX-11DZ1-0326-SM-5N9BN 4.9
GTEX-ZDTT-2126-SM-5S2OJ 4.9
GTEX-12WSN-1326-SM-5GCNT 4.8
GTEX-TKQ1-0226-SM-33HB5 4.7
GTEX-U412-1826-SM-4DXTJ 4.7
GTEX-11ZUS-0826-SM-5FQUY 4.6
GTEX-11GSO-1926-SM-5A5K3 4.5
GTEX-R55D-0826-SM-48FEA 4.5
GTEX-ZYW4-0826-SM-5GIDG 4.5
GTEX-11O72-2126-SM-5N9FO 4.3
GTEX-QEG5-0726-SM-4R1JQ 4.3
GTEX-ZYFC-0826-SM-5E44K 4.3
GTEX-132NY-0826-SM-5K7Y7 4.2
GTEX-ZQG8-0726-SM-5P9H9 4.2
GTEX-13FHO-0826-SM-5L3E8 3.9
GTEX-X261-0626-SM-3NMD9 3.9
GTEX-11OF3-1926-SM-59889 3.8
GTEX-14E6E-1326-SM-5S2NR 3.8
GTEX-RUSQ-2026-SM-4GIAK 3.7
GTEX-ZDYS-1126-SM-5K7UB 3.7
GTEX-PSDG-1626-SM-48TCQ 3.6
GTEX-REY6-2426-SM-48FF5 3.5
GTEX-WFON-1826-SM-3GILG 3.4
GTEX-YFCO-1826-SM-4W1YH 3.4
GTEX-11ZTT-2326-SM-5EQLG 3.3
GTEX-ZLFU-2126-SM-4WWEV 3.3
GTEX-11NSD-0926-SM-5N9DR 3.2
GTEX-ZA64-1526-SM-5CVMD 3.0
GTEX-ZDXO-0126-SM-5S2ND 3.0
GTEX-11P82-1326-SM-5HL62 2.9
GTEX-U8XE-0826-SM-4E3J1 2.7
GTEX-Y5V6-2126-SM-4WWFX 2.7
GTEX-132AR-0826-SM-5EGK6 2.6
GTEX-WY7C-2726-SM-3NB3P 2.5
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

3.1

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 3.1
FF:10080-102A8 77 years, female 3.1

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