We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
AMIGO2
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:26.9TPM
GTEx:10.4RPKM
FANTOM5:9.9Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Not detected
Cells in white pulp:Not detected
 

Antibody staining

Antibody HPA054004

 

Cells in red pulp

Not detected  

Cells in white pulp

Not detected  
 
 
 

SPLEEN - HPA RNA-seq

Average TPM

26.9

overview Female, age 60
Sample 1
TPM: 24.9
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 18.9
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 23.2
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 26.0
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 41.6
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

10.4

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 10.4
Samples: 104

Max RPKM: 20.5
Min RPKM: 4.3
Std RPKM: 2.8
Median RPKM: 10
GTEX-YB5K-1926-SM-4VDT4 20.5
GTEX-PLZ6-0126-SM-48TC6 16.7
GTEX-132QS-0226-SM-5IFFZ 16.2
GTEX-139T6-0226-SM-5IFGZ 15.7
GTEX-11DXX-0726-SM-5H12X 14.4
GTEX-ZVZP-0726-SM-59HKA 14.4
GTEX-1211K-0426-SM-5FQTP 14.2
GTEX-131XG-0426-SM-5IFGD 14.0
GTEX-13PL7-1126-SM-5MR5O 14.0
GTEX-YFCO-0926-SM-5LUA5 14.0
GTEX-X4LF-0226-SM-4QAS8 13.9
GTEX-R55G-0226-SM-48FEI 13.8
GTEX-XV7Q-0126-SM-4BRVK 13.8
GTEX-ZDTT-1026-SM-5KM19 13.8
GTEX-1399S-0226-SM-5IFFG 13.6
GTEX-P4PP-0926-SM-48TBZ 13.6
GTEX-W5WG-0626-SM-4SOID 13.6
GTEX-XGQ4-0126-SM-4AT4H 13.6
GTEX-1122O-0526-SM-5N9DM 13.5
GTEX-117YX-2126-SM-5GIEL 13.5
GTEX-12WSK-0126-SM-5GCO7 13.5
GTEX-S3XE-0626-SM-4AD6B 13.5
GTEX-13PVR-0326-SM-5RQJY 13.4
GTEX-T5JW-0126-SM-4DM6K 12.9
GTEX-144GN-2126-SM-5O99D 12.8
GTEX-X585-1826-SM-4QAS3 12.8
GTEX-14DAR-0326-SM-5S2PS 12.6
GTEX-11P7K-0426-SM-5BC5H 12.4
GTEX-12BJ1-0726-SM-5EGGF 12.4
GTEX-ZAB5-0526-SM-5CVMU 12.4
GTEX-XUJ4-0226-SM-4BOP8 12.2
GTEX-13N11-0126-SM-5KM2Z 12.1
GTEX-WFON-0126-SM-4LVM9 12.0
GTEX-YEC4-0126-SM-4W21T 11.6
GTEX-QCQG-0226-SM-48U28 11.5
GTEX-ZPU1-1026-SM-4YCEQ 11.3
GTEX-OIZH-0926-SM-48TBR 11.2
GTEX-11VI4-0126-SM-5GU6Z 11.0
GTEX-13CF3-0226-SM-5J1NW 11.0
GTEX-ZLWG-0426-SM-4WWFA 11.0
GTEX-146FR-1926-SM-5NQA6 10.9
GTEX-Q734-0226-SM-48U1A 10.9
GTEX-XXEK-0126-SM-4BRVU 10.9
GTEX-13111-0126-SM-5EGHO 10.8
GTEX-P4QS-0926-SM-48TBS 10.8
GTEX-Y5LM-0326-SM-4VBRN 10.7
GTEX-Z9EW-0726-SM-5HL9H 10.6
GTEX-13VXT-1326-SM-5LU3Y 10.5
GTEX-YB5E-0426-SM-5IFHR 10.4
GTEX-13S86-0126-SM-5S2PI 10.3
GTEX-ZYFG-0726-SM-5GIDX 10.2
GTEX-PW2O-0126-SM-48TC8 10.0
GTEX-147F3-0126-SM-5NQBJ 9.9
GTEX-XAJ8-0126-SM-47JYG 9.9
GTEX-ZLFU-0526-SM-4WWBN 9.9
GTEX-11LCK-0126-SM-5A5M5 9.7
GTEX-Y114-0726-SM-4TT6U 9.7
GTEX-Y3I4-0126-SM-4TT26 9.7
GTEX-UJHI-0126-SM-4IHLP 9.5
GTEX-WHWD-0126-SM-4OORS 9.5
GTEX-11EQ9-0426-SM-5A5JY 9.4
GTEX-14E6E-1226-SM-5S2R5 9.4
GTEX-13FH7-1326-SM-5IFG8 9.3
GTEX-QDVN-0526-SM-48TZ4 9.3
GTEX-QMRM-0226-SM-4R1K7 9.3
GTEX-12WSG-0926-SM-5EGIH 9.2
GTEX-Y8LW-0126-SM-4VBS1 9.2
GTEX-11XUK-0426-SM-5EQML 9.1
GTEX-U3ZN-0126-SM-4DXUM 9.1
GTEX-ZP4G-0326-SM-4YCEF 9.1
GTEX-11NSD-0426-SM-5N9CR 8.9
GTEX-12WSJ-0526-SM-5GCOZ 8.9
GTEX-13X6H-0726-SM-5Q5BX 8.9
GTEX-11P81-1326-SM-5GU5S 8.8
GTEX-S4Z8-0226-SM-4AD5K 8.7
GTEX-ZVP2-0526-SM-51MSC 8.7
GTEX-145MN-0126-SM-5RQHY 8.6
GTEX-U4B1-0526-SM-4DXTK 8.6
GTEX-Q2AH-0226-SM-48U1I 8.4
GTEX-XMK1-0126-SM-4B65F 8.4
GTEX-XPVG-0626-SM-4B65B 8.4
GTEX-1399R-0226-SM-5IJGG 8.3
GTEX-XQ8I-1726-SM-4BOQB 8.3
GTEX-X3Y1-0126-SM-4PQZA 8.2
GTEX-PX3G-0926-SM-48U12 8.1
GTEX-VJYA-0126-SM-4KL1P 7.8
GTEX-ZYWO-0226-SM-5GZX3 7.7
GTEX-QV31-0126-SM-447BP 7.4
GTEX-UPK5-1626-SM-4JBHI 7.3
GTEX-12WSN-0126-SM-5DUX5 7.2
GTEX-QLQW-0126-SM-447BK 7.2
GTEX-RUSQ-0126-SM-47JWV 7.2
GTEX-ZV6S-0826-SM-5NQ6Z 7.1
GTEX-ZZPU-0126-SM-5E446 6.9
GTEX-131XE-1126-SM-5EGHW 6.8
GTEX-U3ZH-0126-SM-4DXUK 6.8
GTEX-139YR-0426-SM-5IFFV 6.7
GTEX-O5YT-0926-SM-48TDG 6.6
GTEX-QV44-0126-SM-4R1KH 6.6
GTEX-OOBJ-0926-SM-48TDO 6.2
GTEX-13U4I-1626-SM-5IFFR 6.1
GTEX-POMQ-0126-SM-48TD6 4.8
GTEX-146FQ-0626-SM-5LU9U 4.7
GTEX-Y3IK-0126-SM-4WWE9 4.3
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

9.9

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 9.9
FF:10025-101D7 39,50,70 years, male 9.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.