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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:101.3TPM
GTEx:31.2RPKM
FANTOM5:66.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not detected
 
 

Antibody staining

Antibody HPA018990

  

Antibody HPA018993

  

Antibody HPA018996

  

Antibody HPA024089

  

Adipocytes

 Medium   Not detected   Not detected   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected   Not detected  

Chondrocytes

 Not detected  
          
       
       
       

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA018990

  

Antibody HPA018993

  

Antibody HPA018996

  

Antibody HPA024089

  

Adipocytes

 Medium   Not detected   Not detected   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected  
          
       
       
       

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

101.3
N/A Female, age 80
Sample 1
TPM: 86.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 129.2
N/A Female, age 57
Sample 3
TPM: 111.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 79.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 99.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

31.2

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 29.8
Samples: 350

Max RPKM: 66.9
Min RPKM: 14.2
Std RPKM: 9.1
Median RPKM: 27.5
GTEX-ZQG8-1526-SM-5HL65 66.9
GTEX-YB5E-2126-SM-5IFI7 61.8
GTEX-Y5V6-2526-SM-5IFJV 60.0
GTEX-ZXES-2026-SM-5NQ6R 55.7
GTEX-ZYY3-0226-SM-5E45M 55.4
GTEX-ZTPG-0226-SM-5O99I 54.3
GTEX-ZDTT-2626-SM-5S2OP 53.7
GTEX-ZP4G-2326-SM-57WEM 52.5
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 33.5
Samples: 227

Max RPKM: 74.7
Min RPKM: 13.6
Std RPKM: 10.7
Median RPKM: 31.1
GTEX-ZF2S-1526-SM-5S2OO 74.7
GTEX-Y5LM-0826-SM-4VDSW 74.1
GTEX-13O21-3126-SM-5J1OI 68.1
GTEX-11EQ9-1126-SM-5987I 66.2
GTEX-ZLWG-0726-SM-5S2NG 63.2
GTEX-VUSG-1426-SM-3GIJN 62.8
GTEX-XV7Q-1726-SM-4BRUU 62.8
GTEX-139YR-0326-SM-5J1MC 62.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

66.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 66.5
FF:10010-101C1 65,65,76 years, mixed 66.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.