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MAP1LC3B
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:45.3RPKM
FANTOM5:185.1Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:High
 

Antibody staining

Antibody HPA052474

 

Antibody HPA052484

 

Antibody HPA053767

 

Antibody CAB037216

 

Glial cells

Not detected   Low   Low   Not detected  

Neuronal cells

High   High   Low   High  
       
       
       

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

45.3

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 45.3
Samples: 117

Max RPKM: 79.5
Min RPKM: 17.3
Std RPKM: 10.7
Median RPKM: 44.6
GTEX-12WSA-0011-R5b-SM-5GU5I 79.5
GTEX-139TT-0011-R5b-SM-5K7W8 75.7
GTEX-QMR6-0011-R5A-SM-32PKT 72.2
GTEX-PVOW-0011-R5A-SM-32PL7 67.9
GTEX-P44H-0011-R5A-SM-2XCEX 67.0
GTEX-132Q8-0011-R5a-SM-5IJDM 65.4
GTEX-T2IS-0011-R5A-SM-32QP4 65.1
GTEX-11H98-0011-R5b-SM-57WCF 61.9
GTEX-12WSB-0011-R5b-SM-5GU67 61.6
GTEX-QVJO-0011-R5A-SM-2S1QM 61.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 61.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 60.6
GTEX-WWYW-0011-R5A-SM-3NB3E 59.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 58.4
GTEX-NPJ7-0011-R5a-SM-33HBK 57.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 57.2
GTEX-XMD1-0011-R5A-SM-4AT47 55.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 55.2
GTEX-TSE9-0011-R5A-SM-3DB7J 54.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 54.5
GTEX-13X6I-0011-R5a-SM-5PNWW 54.2
GTEX-WVLH-0011-R5A-SM-3MJFW 53.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 53.1
GTEX-X585-0011-R5A-SM-46MVI 52.6
GTEX-12WSF-0011-R5a-SM-5HL8K 52.5
GTEX-UTHO-0011-R5A-SM-3GIJD 52.4
GTEX-13NYS-0011-R5a-SM-5MR4D 52.1
GTEX-13X6K-0011-R5b-SM-5PNUE 51.6
GTEX-N7MS-0011-R5a-SM-2HMK8 51.5
GTEX-T6MN-0011-R5A-SM-32QPD 50.9
GTEX-R55E-0011-R5A-SM-2TC5N 49.8
GTEX-WZTO-0011-R5B-SM-3NMC5 49.7
GTEX-WL46-0011-R5A-SM-3LK6V 48.9
GTEX-13CZV-0011-R5a-SM-5K7XA 48.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 48.8
GTEX-S7SE-0011-R5A-SM-2XCDA 48.6
GTEX-N7MT-0011-R5a-SM-2I3G6 48.1
GTEX-145LS-0011-R5a-SM-5SI65 47.9
GTEX-1399T-0011-R5b-SM-5IJDK 47.7
GTEX-13FLV-0011-R5a-SM-5LZWT 46.8
GTEX-13FLW-0011-R5a-SM-5LZX6 46.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 46.8
GTEX-RVPU-0011-R5A-SM-2XCAD 46.7
GTEX-139T8-0011-R5b-SM-5J1MO 46.4
GTEX-T5JC-0011-R5A-SM-32PLK 46.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 46.2
GTEX-11NV4-0011-R5a-SM-5NQ88 46.1
GTEX-12WSC-0011-R5b-SM-5CVNS 46.1
GTEX-RU72-0011-R5A-SM-2TF6U 46.1
GTEX-X261-0011-R5A-SM-3NMB4 46.0
GTEX-14BIM-0011-R5b-SM-5S2RM 45.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 45.5
GTEX-X4XX-0011-R5A-SM-46MWN 45.4
GTEX-11OF3-0011-R5a-SM-57WB4 45.0
GTEX-11GSP-0011-R5a-SM-57WBE 44.8
GTEX-13OW6-0011-R5a-SM-5O9BK 44.8
GTEX-ZUA1-0011-R5b-SM-51MTG 44.7
GTEX-13JUV-0011-R5a-SM-5LZY5 44.6
GTEX-14ABY-0011-R5b-SM-5SI7B 44.6
GTEX-Z93S-0011-R5b-SM-4RGNI 44.6
GTEX-13JVG-0011-R5a-SM-5MR4O 44.5
GTEX-131YS-0011-R5b-SM-5K7YB 44.4
GTEX-13NYB-0011-R5a-SM-5MR45 44.1
GTEX-144GO-0011-R5a-SM-5PNUR 44.0
GTEX-13FXS-0011-R5b-SM-5LZYE 43.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 43.5
GTEX-13G51-0011-R5a-SM-5L3EB 43.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 43.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 43.4
GTEX-145MH-0011-R5a-SM-5P9JT 43.2
GTEX-YFC4-0011-R5a-SM-4RGLR 43.0
GTEX-13O3O-0011-R5b-SM-5KM44 42.7
GTEX-13OVH-0011-R5b-SM-5KM4L 42.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 42.2
GTEX-13SLX-0011-R5a-SM-5O9BV 42.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 41.9
GTEX-NL4W-0011-R5a-SM-2I3GD 41.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 41.2
GTEX-13S7M-0011-R5b-SM-5P9HS 40.7
GTEX-13X6J-0011-R5b-SM-5PNWT 40.6
GTEX-OHPN-0011-R5A-SM-2I5FF 40.6
GTEX-WHSE-0011-R5A-SM-3P5ZO 40.3
GTEX-13OVL-0011-R5b-SM-5L3FU 40.2
GTEX-1313W-0011-R5b-SM-5L3EP 39.6
GTEX-RVPV-0011-R5A-SM-2TF69 39.5
GTEX-13VXU-0011-R5a-SM-5O9D7 39.1
GTEX-11WQC-0011-R5a-SM-5BC74 39.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 38.5
GTEX-14BIN-0011-R5b-SM-5SI78 38.5
GTEX-12ZZX-0011-R5a-SM-5HL89 38.4
GTEX-1445S-0011-R5a-SM-5PNUS 38.3
GTEX-ZE7O-0011-R5a-SM-57WBO 38.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 37.7
GTEX-13OW7-0011-R5b-SM-5O9DM 37.6
GTEX-NL3H-0011-R5a-SM-2I3GB 37.4
GTEX-13OW5-0011-R5b-SM-5L3FR 37.3
GTEX-XOTO-0011-R5A-SM-4B657 37.2
GTEX-OXRN-0011-R5A-SM-2I5EF 37.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 36.8
GTEX-ZXG5-0011-R5b-SM-57WBN 36.0
GTEX-12WSH-0011-R5b-SM-5P9F3 35.4
GTEX-12WSD-0011-R5b-SM-5CVNG 35.2
GTEX-ZVT3-0011-R5a-SM-51MSI 35.1
GTEX-139TS-0011-R5b-SM-5J2MZ 34.5
GTEX-ZV68-0011-R5a-SM-4YCDW 34.2
GTEX-13CIG-0011-R5b-SM-5L3F2 33.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 31.5
GTEX-144GL-0011-R5b-SM-5PNUJ 31.1
GTEX-S7PM-0011-R5A-SM-3NM8G 31.1
GTEX-YJ89-0011-R5a-SM-4V6GM 29.6
GTEX-13112-0011-R5b-SM-5DUV8 28.7
GTEX-11UD1-0011-R5b-SM-5P9FP 26.2
GTEX-13FHP-0011-R5b-SM-5LZY2 26.0
GTEX-13CF2-0011-R5a-SM-5LZWS 25.5
GTEX-1477Z-0011-R5b-SM-5PNUO 22.8
GTEX-145MG-0011-R5b-SM-5S2VU 20.9
GTEX-13NZA-0011-R5b-SM-5KM4K 17.3
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

185.1

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 185.1
FF:10164-103B2 76 years, female 229.7
FF:10379-105H1 89 years, female 140.6

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