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MAP1LC3B
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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:114.8TPM
GTEx:61.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Medium
Neuropil:Medium
 

Antibody staining

Antibody HPA052474

 

Antibody HPA052484

 

Antibody HPA053767

 

Antibody CAB037216

 

Endothelial cells

Not detected   Medium   Medium   Not detected  

Glial cells

Not detected   Low   Not detected   Not detected  

Neuronal cells

High   High   Low   Medium  

Neuropil

Not detected   Medium   High   Medium  
       
       
       

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

114.8

N/A Male, age 5
Sample 1
TPM: 111.3
overview Female, age 40
Sample 2
TPM: 109.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 123.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

61.0

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 52.4
Samples: 114

Max RPKM: 82.4
Min RPKM: 32.9
Std RPKM: 9.3
Median RPKM: 51.2
GTEX-QMR6-1426-SM-32PLA 82.4
GTEX-PVOW-2526-SM-2XCF7 80.7
GTEX-TSE9-3026-SM-3DB76 76.3
GTEX-UTHO-3026-SM-3GAFB 72.4
GTEX-Y8DK-0826-SM-4TT3T 70.5
GTEX-WWYW-3126-SM-3NB39 69.2
GTEX-11WQK-3026-SM-5EQL6 67.3
GTEX-132Q8-3026-SM-5PNVG 66.4
GTEX-X585-3026-SM-46MWF 66.3
GTEX-T2IS-3026-SM-32QPM 66.1
GTEX-QVJO-1426-SM-2S1QY 65.4
GTEX-X4XX-3026-SM-3NMB2 64.6
GTEX-WVLH-3026-SM-3MJG9 64.1
GTEX-XLM4-3026-SM-4AT6L 63.7
GTEX-13NYC-2826-SM-5K7WR 63.3
GTEX-13X6K-2926-SM-5Q5D5 63.0
GTEX-ZAK1-3026-SM-5S2MJ 62.5
GTEX-14A5I-2926-SM-5Q5CQ 61.4
GTEX-13FHO-3026-SM-5J1O9 60.2
GTEX-14BMV-3026-SM-5S2PQ 59.4
GTEX-QVUS-2826-SM-3GADB 59.4
GTEX-T5JC-2426-SM-3NMDB 59.0
GTEX-RU72-3026-SM-5SI7Y 58.9
GTEX-145LS-3126-SM-5Q5BY 58.7
GTEX-11OF3-2926-SM-5HL78 58.4
GTEX-14ASI-3026-SM-5S2PN 58.3
GTEX-131YS-3126-SM-5KLYT 58.2
GTEX-13NYS-3126-SM-5KLYV 57.6
GTEX-ZE7O-3126-SM-5HL5X 57.4
GTEX-145MG-3026-SM-5RQJA 57.0
GTEX-11DXY-3226-SM-5GIDE 56.8
GTEX-13X6J-3026-SM-5Q5CU 56.5
GTEX-145MH-3026-SM-5Q5DZ 56.4
GTEX-12ZZZ-3026-SM-5BC67 56.1
GTEX-QDT8-2926-SM-32PKC 56.1
GTEX-R55F-1326-SM-5S2V4 55.8
GTEX-13FXS-3126-SM-5J2NN 55.6
GTEX-NPJ8-1526-SM-2D7VU 55.5
GTEX-11NUK-2926-SM-5A5MD 55.4
GTEX-WZTO-2926-SM-3NM9I 55.2
GTEX-WHSE-3026-SM-3P5ZH 54.9
GTEX-13O3Q-2926-SM-5KM45 54.8
GTEX-RNOR-2326-SM-2TF4I 54.8
GTEX-T6MN-2626-SM-32PMQ 54.1
GTEX-WL46-2926-SM-3LK82 54.1
GTEX-11O72-2926-SM-5BC4V 54.0
GTEX-139T8-1026-SM-5J2MC 53.9
GTEX-11OC5-0726-SM-5P9JK 53.2
GTEX-11PRG-2926-SM-5987A 52.8
GTEX-1399T-3026-SM-5KLZC 52.6
GTEX-ZZPT-3026-SM-5GZXH 52.6
GTEX-ZVT3-3026-SM-5E43N 52.3
GTEX-12WSH-3026-SM-5CVNI 52.2
GTEX-13OVJ-2826-SM-5L3GW 52.0
GTEX-YFC4-3126-SM-5PNV6 51.9
GTEX-12ZZW-2926-SM-5LZUP 51.6
GTEX-13PL6-3126-SM-5LUAR 51.4
GTEX-111FC-3126-SM-5GZZ2 51.0
GTEX-1192X-3126-SM-5N9BY 50.9
GTEX-13OVH-3026-SM-5MR4N 50.9
GTEX-1128S-2726-SM-5H12C 50.7
GTEX-11ZUS-2926-SM-5FQSL 50.4
GTEX-OXRN-2426-SM-2I5EQ 50.4
GTEX-13SLX-3126-SM-5S2Q5 50.3
GTEX-144GL-3026-SM-5Q5CW 50.0
GTEX-11GSO-2926-SM-5HL73 49.8
GTEX-13FLW-1426-SM-5K7YE 49.7
GTEX-ZUA1-3026-SM-59HJC 49.5
GTEX-1313W-3126-SM-5LZUI 49.4
GTEX-Z93S-2926-SM-57WB9 49.3
GTEX-11TTK-2926-SM-5PNYP 49.2
GTEX-13OW6-3026-SM-5J2MI 49.2
GTEX-144FL-3026-SM-5O99C 49.0
GTEX-117XS-3026-SM-5N9CA 48.8
GTEX-NPJ7-2726-SM-2I3FT 48.8
GTEX-12ZZX-2926-SM-5GCOQ 48.7
GTEX-13VXU-2926-SM-5LU5C 48.6
GTEX-Y111-2726-SM-4TT3N 48.4
GTEX-ZYFD-3026-SM-5E44C 47.7
GTEX-13JVG-3126-SM-5L3FH 47.6
GTEX-11DXW-1126-SM-5H12Q 47.3
GTEX-12WSC-3026-SM-5GCNF 47.0
GTEX-13NYB-3026-SM-5IJD7 46.6
GTEX-13S7M-3126-SM-5RQJQ 46.6
GTEX-13O3O-3126-SM-5KM3H 46.3
GTEX-13OW7-3026-SM-5L3GY 46.3
GTEX-YJ89-3026-SM-5IFJI 46.3
GTEX-11EI6-3026-SM-5GZZO 46.2
GTEX-11EMC-3226-SM-5EGKW 46.1
GTEX-13QIC-2926-SM-5J2NF 46.1
GTEX-13FHP-3026-SM-5IJBS 46.0
GTEX-13IVO-2926-SM-5L3CZ 46.0
GTEX-12ZZY-3026-SM-5GCOU 45.8
GTEX-13OW8-2826-SM-5L3GC 45.7
GTEX-XOTO-3026-SM-4B65M 45.5
GTEX-PWO3-0926-SM-2I5EY 44.5
GTEX-12126-1026-SM-5P9JJ 44.2
GTEX-11NV4-2126-SM-5N9DS 43.3
GTEX-11ONC-2926-SM-5P9JM 43.0
GTEX-131XW-3126-SM-5LZUC 42.7
GTEX-145MF-2726-SM-5O995 41.3
GTEX-147GR-3026-SM-5S2ML 40.5
GTEX-13G51-3026-SM-5IJB8 40.2
GTEX-Q2AG-2926-SM-2HMJ3 40.0
GTEX-1445S-3026-SM-5O9BR 39.6
GTEX-13JUV-2926-SM-5LZX7 39.5
GTEX-1117F-3226-SM-5N9CT 39.1
GTEX-12WSD-3126-SM-5HL7P 38.1
GTEX-11GSP-3226-SM-5986O 37.9
GTEX-13PVQ-3026-SM-5SI93 37.8
GTEX-N7MT-1126-SM-5SI7V 35.6
GTEX-11GS4-3126-SM-5A5LH 35.0
GTEX-ZAJG-3126-SM-5HL9J 34.1
GTEX-12WSA-2926-SM-5EQ4D 32.9
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 70.2
Samples: 108

Max RPKM: 114.1
Min RPKM: 33
Std RPKM: 15.5
Median RPKM: 70.6
GTEX-QVUS-0011-R10A-SM-3GIK3 114.1
GTEX-13N2G-0011-R10a-SM-5MR34 110.1
GTEX-QMR6-0011-R10A-SM-32PKO 107.2
GTEX-P44H-0011-R10A-SM-2XCEK 104.1
GTEX-QDT8-0011-R10A-SM-32PKG 100.7
GTEX-132Q8-0011-R10b-SM-5DUWZ 95.2
GTEX-13RTJ-0011-R10b-SM-5O9CW 93.0
GTEX-ZAB4-0011-R10a-SM-4SOKH 92.8
GTEX-X4EP-0011-R10B-SM-4QASJ 91.4
GTEX-T6MN-0011-R10A-SM-32QP7 91.2
GTEX-WWYW-0011-R10A-SM-3NB35 90.2
GTEX-12WSC-0011-R10a-SM-5GU57 89.0
GTEX-14BIN-0011-R10a-SM-5S2UA 87.7
GTEX-NPJ7-0011-R10A-SM-2I3E5 87.5
GTEX-11H98-0011-R10b-SM-5NQ98 85.3
GTEX-QVJO-0011-R10A-SM-2S1QJ 85.0
GTEX-Y8DK-0011-R10A-SM-4SOK1 84.6
GTEX-X4XX-0011-R10B-SM-46MWO 84.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 83.6
GTEX-WL46-0011-R10A-SM-3MJFQ 82.0
GTEX-13NYS-0011-R10a-SM-5MR4S 80.8
GTEX-X585-0011-R10A-SM-46MUY 80.5
GTEX-XLM4-0011-R10A-SM-4AT5P 80.5
GTEX-WVLH-0011-R10A-SM-3MJFM 80.2
GTEX-TSE9-0011-R10A-SM-3DB7O 79.4
GTEX-13X6K-0011-R10a-SM-5P9JR 78.9
GTEX-S7SE-0011-R10A-SM-2XCDF 78.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 78.7
GTEX-13O3Q-0011-R10b-SM-5KM39 78.6
GTEX-13CZV-0011-R10b-SM-5LZYD 77.3
GTEX-145MG-0011-R10a-SM-5PNWG 77.1
GTEX-YFC4-0011-R10a-SM-4SOK5 76.6
GTEX-YJ89-0011-R10a-SM-4SOK9 76.2
GTEX-13QJC-0011-R10a-SM-5SI63 75.8
GTEX-145MH-0011-R10b-SM-5PNUK 75.6
GTEX-N7MS-0011-R10A-SM-2HMJK 75.0
GTEX-NPJ8-0011-R10A-SM-2YUMO 75.0
GTEX-13S7M-0011-R10b-SM-5PNZB 74.9
GTEX-12WSH-0011-R10a-SM-5LZUS 74.8
GTEX-131YS-0011-R10b-SM-5EQ5N 74.6
GTEX-13N1W-0011-R10b-SM-5MR4H 72.9
GTEX-13X6J-0011-R10b-SM-5PNWA 72.9
GTEX-13X6I-0011-R10a-SM-5PNWI 72.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC 72.7
GTEX-145LS-0011-R10a-SM-5PNUQ 72.7
GTEX-13SLX-0011-R10a-SM-5P9HV 72.5
GTEX-12WSF-0011-R10a-SM-5LZVH 72.3
GTEX-1313W-0011-R10b-SM-5DUXA 71.7
GTEX-12WSE-0011-R10b-SM-5P9JV 71.3
GTEX-11WQK-0011-R10a-SM-5BC6R 71.2
GTEX-13FXS-0011-R10a-SM-5J2MA 71.0
GTEX-13OVJ-0011-R10b-SM-5L3HT 71.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 71.0
GTEX-T5JC-0011-R10A-SM-32PM2 70.8
GTEX-13O3O-0011-R10a-SM-5LUA9 70.4
GTEX-12WSD-0011-R10b-SM-5GU79 70.3
GTEX-13FHO-0011-R10b-SM-5J2MM 70.3
GTEX-13QIC-0011-R10a-SM-5O9C7 70.0
GTEX-NL3H-0011-R10A-SM-2I3E9 69.9
GTEX-147GR-0011-R10b-SM-5S2UM 69.4
GTEX-14BIL-0011-R10a-SM-5SI75 69.0
GTEX-ZDXO-0011-R10a-SM-4WWD8 69.0
GTEX-139TS-0011-R10a-SM-5K7TU 68.7
GTEX-13OW7-0011-R10a-SM-5L3H3 68.5
GTEX-N7MT-0011-R10A-SM-2I3E1 67.9
GTEX-ZF28-0011-R10a-SM-4WWEH 67.6
GTEX-12WSM-0011-R10a-SM-5DUWV 66.8
GTEX-13OW8-0011-R10a-SM-5L3H6 66.4
GTEX-Q2AG-0011-R10A-SM-2HMLA 66.1
GTEX-WZTO-0011-R10B-SM-4E3KB 66.1
GTEX-ZVT3-0011-R10b-SM-57WB6 65.9
GTEX-13G51-0011-R10b-SM-5LZYF 65.7
GTEX-13FLW-0011-R10b-SM-5LZZF 65.3
GTEX-XMD1-0011-R10A-SM-4AT4A 65.0
GTEX-ZUA1-0011-R10a-SM-51MT6 64.6
GTEX-OXRN-0011-R10A-SM-2I5GC 64.1
GTEX-13JUV-0011-R10b-SM-5LZXR 63.5
GTEX-13SLW-0011-R10a-SM-5S2UI 62.9
GTEX-RVPU-0011-R10A-SM-2XCAH 62.5
GTEX-13FLV-0011-R10b-SM-5LZZ2 62.0
GTEX-13NYB-0011-R10a-SM-5KM43 61.7
GTEX-X261-0011-R10B-SM-4E3JT 61.4
GTEX-12126-0011-R10b-SM-5BC6T 61.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 61.2
GTEX-13OVL-0011-R10a-SM-5L3GS 61.2
GTEX-131XH-0011-R10a-SM-5EGLJ 60.1
GTEX-13OW6-0011-R10a-SM-5L3HE 60.0
GTEX-Z93S-0011-R10a-SM-4RGNM 59.8
GTEX-145LU-0011-R10a-SM-5PNWJ 57.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 57.0
GTEX-147F4-0011-R10b-SM-5S2WC 56.7
GTEX-11ZUS-0011-R10b-SM-5BC79 54.5
GTEX-NL4W-0011-R10A-SM-2I3DY 54.2
GTEX-13FTZ-0011-R10b-SM-5KLZS 53.1
GTEX-11WQC-0011-R10a-SM-57WCT 50.4
GTEX-1445S-0011-R10a-SM-5PNWB 50.2
GTEX-12WSA-0011-R10b-SM-5P9ET 50.1
GTEX-OXRO-0011-R10A-SM-2I5EH 47.5
GTEX-11GSP-0011-R10a-SM-5NQ7J 45.9
GTEX-ZXG5-0011-R10a-SM-57WDD 45.7
GTEX-13JVG-0011-R10b-SM-5KM2P 44.8
GTEX-ZE7O-0011-R10a-SM-57WAZ 44.1
GTEX-14753-0011-R10b-SM-5S2WE 43.5
GTEX-1477Z-0011-R10b-SM-5S2RF 41.4
GTEX-ZV68-0011-R10a-SM-51MT7 37.8
GTEX-13NZA-0011-R10b-SM-5KM54 37.5
GTEX-13IVO-0011-R10a-SM-5LZY3 34.9
GTEX-131XW-0011-R10a-SM-5DUVA 33.0
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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