We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
MAP1LC3B
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:46.6RPKM
FANTOM5:255.3Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA052474

 

Antibody HPA052484

 

Antibody HPA053767

 

Antibody CAB037216

 

Glial cells

Not detected   Low   Low   Not detected  

Neuronal cells

High   High   Low   Medium  
       
       
       

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

46.6

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 46.6
Samples: 94

Max RPKM: 81.4
Min RPKM: 13.2
Std RPKM: 14.4
Median RPKM: 48.4
GTEX-QMR6-0011-R1A-SM-32PKW 81.4
GTEX-PVOW-0011-R1A-SM-32PL6 78.6
GTEX-13O3O-0011-R1b-SM-5KM2K 70.0
GTEX-ZAB4-0011-R1a-SM-4RGNO 69.4
GTEX-T6MN-0011-R1A-SM-32QOY 67.3
GTEX-QVUS-0011-R1A-SM-3GAD2 65.6
GTEX-P44H-0011-R1A-SM-3NM8J 65.2
GTEX-N7MS-0011-R1a-SM-2HMJG 65.1
GTEX-145MH-0011-R1b-SM-5PNWY 63.5
GTEX-WL46-0011-R1A-SM-3LK6M 63.5
GTEX-R55E-0011-R1A-SM-2TC6N 62.6
GTEX-139TT-0011-R1a-SM-5LZVD 62.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 62.3
GTEX-RNOR-0011-R1A-SM-5SI8F 62.2
GTEX-QDT8-0011-R1A-SM-32PKS 61.9
GTEX-13JUV-0011-R1a-SM-5LZY4 61.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 61.2
GTEX-131XH-0011-R1a-SM-5DUWA 59.7
GTEX-X585-0011-R1B-SM-46MVE 59.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 59.1
GTEX-WZTO-0011-R1B-SM-3NMAR 58.5
GTEX-12WSH-0011-R1a-SM-5GU5V 58.4
GTEX-XOTO-0011-R1B-SM-4B65C 58.2
GTEX-WWYW-0011-R1A-SM-3TW8G 58.2
GTEX-UTHO-0011-R1A-SM-3GIJO 57.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 56.9
GTEX-13N2G-0011-R1b-SM-5MR3G 55.7
GTEX-13N1W-0011-R1b-SM-5MR4T 55.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 55.5
GTEX-12WSF-0011-R1a-SM-5DUVI 54.4
GTEX-XMD1-0011-R1A-SM-4AT4C 54.0
GTEX-QVJO-0011-R1A-SM-2S1QI 53.8
GTEX-YFC4-0011-R1a-SM-4V6EH 53.7
GTEX-NPJ8-0011-R1a-SM-33HCB 53.2
GTEX-13G51-0011-R1a-SM-5LZYR 52.8
GTEX-12WSE-0011-R1b-SM-5GU4V 52.2
GTEX-TSE9-0011-R1A-SM-3DB7E 51.4
GTEX-N7MT-0011-R1a-SM-5SI7S 51.4
GTEX-144GL-0011-R1a-SM-5PNZ5 51.4
GTEX-13FLW-0011-R1b-SM-5LZX2 51.3
GTEX-ZUA1-0011-R1a-SM-4YCE2 50.2
GTEX-132Q8-0011-R1a-SM-5EGLK 49.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 49.6
GTEX-13NYS-0011-R1b-SM-5MR55 49.4
GTEX-12WSM-0011-R1a-SM-5LZW6 49.2
GTEX-13X6I-0011-R1b-SM-5PNZC 49.2
GTEX-13OW5-0011-R1b-SM-5L3GE 48.6
GTEX-12WSD-0011-R1b-SM-5LZVY 48.1
GTEX-13FXS-0011-R1a-SM-5K7U6 48.0
GTEX-NPJ7-0011-R1a-SM-3GACT 47.6
GTEX-14ASI-0011-R1b-SM-5S2TY 47.4
GTEX-PWO3-0011-R1A-SM-2I5EW 46.7
GTEX-13OW6-0011-R1a-SM-5L3HQ 46.7
GTEX-1313W-0011-R1b-SM-5EQ4A 46.0
GTEX-13QJC-0011-R1b-SM-5S2UU 45.6
GTEX-T5JC-0011-R1A-SM-32PM6 44.3
GTEX-145LS-0011-R1b-SM-5PNUP 43.9
GTEX-S7SE-0011-R1A-SM-2XCDE 42.9
GTEX-13S7M-0011-R1b-SM-5PNZE 42.7
GTEX-11GSO-0011-R1b-SM-57WD3 42.3
GTEX-13FHO-0011-R1b-SM-5KLZG 42.3
GTEX-131YS-0011-R1a-SM-5DUXC 41.1
GTEX-13OVL-0011-R1a-SM-5L3H5 41.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 40.8
GTEX-X4XX-0011-R1B-SM-3P622 39.7
GTEX-1399T-0011-R1b-SM-5DUWN 39.3
GTEX-13NYB-0011-R1b-SM-5KM4F 38.7
GTEX-WVLH-0011-R1A-SM-4MVOK 38.4
GTEX-13112-0011-R1b-SM-5HL7K 38.4
GTEX-11UD1-0011-R1b-SM-5BC7D 38.2
GTEX-11ZTS-0011-R1a-SM-5BC71 37.9
GTEX-13JVG-0011-R1a-SM-5KM32 35.4
GTEX-13OW7-0011-R1b-SM-5L3HF 34.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 33.1
GTEX-13OW8-0011-R1a-SM-5L3HI 32.8
GTEX-1212Z-0011-R1b-SM-5BC72 32.5
GTEX-145LU-0011-R1a-SM-5Q5CE 31.3
GTEX-13SLW-0011-R1a-SM-5S2W7 30.8
GTEX-12WSB-0011-R1b-SM-5P9EY 29.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 28.7
GTEX-139T8-0011-R1a-SM-5HL75 28.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 27.9
GTEX-13NZA-0011-R1b-SM-5LUAF 27.8
GTEX-11ONC-0011-R1a-SM-57WD4 27.7
GTEX-NL3H-0011-R1a-SM-48TDJ 27.2
GTEX-YJ89-0011-R1a-SM-4RGLS 26.8
GTEX-ZVZQ-0011-R1a-SM-57WBU 25.2
GTEX-ZF28-0011-R1a-SM-4WWD1 24.6
GTEX-13PDP-0011-R1a-SM-5PNX5 24.3
GTEX-144GO-0011-R1a-SM-5PNWO 21.1
GTEX-13CF2-0011-R1a-SM-5LZY1 20.4
GTEX-13FHP-0011-R1b-SM-5K7XL 18.1
GTEX-ZE7O-0011-R1a-SM-57WDM 13.3
GTEX-13FTY-0011-R1a-SM-5LZXE 13.2
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

255.3

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 255.3
FF:10153-102I9 76 years, female 310.8
FF:10374-105G5 89 years, female 239.5
FF:10169-103B7 60 years, female 215.7

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.