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Method

Validation

Method

Validation

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Expression

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Specificity

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Specificity

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Detectable

Cell line

Detectable

Category

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Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA055741

 

Antibody HPA059539

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA055741   HPA059539  

Host species

Rabbit   Rabbit  

Clonality

pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand  

Other gene match

   

Released in version

12   12  

References

   

VALIDATION SUMMARY

 
 

Antibody HPA055741

 

Antibody HPA059539

 
Immunocytochemistry

  Approved  
Immunohistochemistry


Validated
 

Validated
 
Western blot

Uncertain   Uncertain  
Protein array

Supported   Approved  

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA055741

 

Antibody HPA059539

 

Standard validation

  Approved  

   

Figure description

  Immunofluorescent staining of human cell line SiHa shows localization to nucleoplasm.  

Antibody dilution

  1:56  

Literature conformity

  The subcellular location is partly supported by literature or no literature is available.  

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA055741

 

Antibody HPA059539

 

Formal validation: Independent

Validated

Pearson correlation >0.6 for protein expression in cell lines using independent antibodies.
 
Validated

Pearson correlation >0.6 for protein expression in cell lines using independent antibodies.
 

 

 
 

 

Figure description

Distribution of protein expression (antibody staining).
Pearson correlation with HPA059539 across 46 cell lines.
  Distribution of protein expression (antibody staining).
Pearson correlation with HPA055741 across 46 cell lines.
 
 

Standard validation

Supported   Supported  

   

Figure description

Immunohistochemical staining of human cerebral cortex shows moderate nuclear positivity in neuronal cells.   Immunohistochemical staining of human cerebral cortex shows strong nuclear positivity in neuronal cells and glial cells.  

Expression

RNA: detected in 37 tissues
Protein: detected in 49 cell types
  RNA: detected in 37 tissues
Protein: detected in 80 cell types
 

Retrieval

HIER pH6   HIER pH6  

Antibody dilution

1:200   1:50  

Literature conformity

Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.  

RNA consistency

Consistent with RNA expression data.   Mainly consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA055741

 

Antibody HPA059539

 

Standard validation

Uncertain

Analysis performed using a standard panel of samples.
Single band differing more than +/-20% from predicted size in kDa and not supported by experimental and/or bioinformatic data.
  Uncertain

Analysis performed using a standard panel of samples.
No bands detected.
 

   

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
 

Target mass (kDa)

45.9, 43.5, 42.2   45.9, 43.5, 42.2, 16.2  

Antibody dilution

1:140   1:190  

PROTEIN ARRAY

 
 

Antibody HPA055741

 

Antibody HPA059539

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Approved

Pass with quality comment low specificity (binding to 1-2 PrESTs >15% and <40%).
 

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.  

Antibody dilution

1:1600   1:2250  

ANTIGEN INFORMATION

 
 

Antibody HPA055741

 

Antibody HPA059539

 

Antigen

Recombinant protein fragment   Recombinant protein fragment  

Length (aa)

29   51  

Antigen sequence

GQQPPMGMMGQVNQGNHMMGQRQIPPYRP
 
NGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSM
P
 

Matching transcripts

SS18-001 - ENSP00000269137 [100%]
SS18-002 - ENSP00000438066 [100%]
SS18-003 - ENSP00000414516 [100%]
  SS18-001 - ENSP00000269137 [100%]
SS18-002 - ENSP00000438066 [100%]
SS18-003 - ENSP00000414516 [100%]
SS18-024 - ENSP00000462766 [100%]
 

Other gene match

   
ANTIGEN VIEW
SS18-001
SS18-002
SS18-003
SS18-024
 

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.