We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
AFG3L2
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:8.1RPKM
FANTOM5:55.8Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody HPA004479

 

Antibody HPA004480

 

Glial cells

Medium   Low  

Neuronal cells

Medium   Medium  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

8.1

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 8.1
Samples: 94

Max RPKM: 17
Min RPKM: 1.7
Std RPKM: 3.8
Median RPKM: 7.7
GTEX-131XH-0011-R1a-SM-5DUWA 17.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 16.4
GTEX-145MH-0011-R1b-SM-5PNWY 15.9
GTEX-RNOR-0011-R1A-SM-5SI8F 15.9
GTEX-T6MN-0011-R1A-SM-32QOY 15.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 15.2
GTEX-WL46-0011-R1A-SM-3LK6M 14.8
GTEX-13JUV-0011-R1a-SM-5LZY4 14.5
GTEX-R55E-0011-R1A-SM-2TC6N 13.4
GTEX-12WSF-0011-R1a-SM-5DUVI 13.3
GTEX-PVOW-0011-R1A-SM-32PL6 13.2
GTEX-X585-0011-R1B-SM-46MVE 13.1
GTEX-13G51-0011-R1a-SM-5LZYR 12.7
GTEX-QVUS-0011-R1A-SM-3GAD2 12.5
GTEX-13O3O-0011-R1b-SM-5KM2K 12.4
GTEX-QVJO-0011-R1A-SM-2S1QI 12.1
GTEX-1313W-0011-R1b-SM-5EQ4A 12.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 12.0
GTEX-WZTO-0011-R1B-SM-3NMAR 11.6
GTEX-WWYW-0011-R1A-SM-3TW8G 11.5
GTEX-QDT8-0011-R1A-SM-32PKS 11.4
GTEX-P44H-0011-R1A-SM-3NM8J 11.2
GTEX-ZAB4-0011-R1a-SM-4RGNO 11.2
GTEX-YFC4-0011-R1a-SM-4V6EH 10.9
GTEX-12WSE-0011-R1b-SM-5GU4V 10.9
GTEX-13N1W-0011-R1b-SM-5MR4T 10.7
GTEX-N7MS-0011-R1a-SM-2HMJG 10.6
GTEX-QMR6-0011-R1A-SM-32PKW 10.6
GTEX-T5JC-0011-R1A-SM-32PM6 10.1
GTEX-13OW6-0011-R1a-SM-5L3HQ 10.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 10.0
GTEX-ZUA1-0011-R1a-SM-4YCE2 9.7
GTEX-XOTO-0011-R1B-SM-4B65C 9.6
GTEX-13FXS-0011-R1a-SM-5K7U6 9.5
GTEX-13FLW-0011-R1b-SM-5LZX2 9.4
GTEX-139TT-0011-R1a-SM-5LZVD 9.3
GTEX-N7MT-0011-R1a-SM-5SI7S 9.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 9.1
GTEX-13X6I-0011-R1b-SM-5PNZC 9.0
GTEX-13N2G-0011-R1b-SM-5MR3G 8.8
GTEX-S7SE-0011-R1A-SM-2XCDE 8.3
GTEX-145LS-0011-R1b-SM-5PNUP 8.3
GTEX-UTHO-0011-R1A-SM-3GIJO 8.2
GTEX-131YS-0011-R1a-SM-5DUXC 8.2
GTEX-13NYB-0011-R1b-SM-5KM4F 8.0
GTEX-13S7M-0011-R1b-SM-5PNZE 8.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 7.7
GTEX-14ASI-0011-R1b-SM-5S2TY 7.7
GTEX-13OVL-0011-R1a-SM-5L3H5 7.5
GTEX-13FHO-0011-R1b-SM-5KLZG 7.5
GTEX-11GSO-0011-R1b-SM-57WD3 7.4
GTEX-X4XX-0011-R1B-SM-3P622 7.3
GTEX-12WSD-0011-R1b-SM-5LZVY 7.0
GTEX-PWO3-0011-R1A-SM-2I5EW 6.8
GTEX-TSE9-0011-R1A-SM-3DB7E 6.8
GTEX-NPJ7-0011-R1a-SM-3GACT 6.7
GTEX-13OW5-0011-R1b-SM-5L3GE 6.7
GTEX-11UD1-0011-R1b-SM-5BC7D 6.5
GTEX-XMD1-0011-R1A-SM-4AT4C 6.3
GTEX-1399T-0011-R1b-SM-5DUWN 6.2
GTEX-1212Z-0011-R1b-SM-5BC72 6.0
GTEX-13QJC-0011-R1b-SM-5S2UU 5.9
GTEX-11ONC-0011-R1a-SM-57WD4 5.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 5.7
GTEX-WVLH-0011-R1A-SM-4MVOK 5.6
GTEX-132Q8-0011-R1a-SM-5EGLK 5.5
GTEX-NPJ8-0011-R1a-SM-33HCB 5.5
GTEX-13OW8-0011-R1a-SM-5L3HI 5.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 5.3
GTEX-144GL-0011-R1a-SM-5PNZ5 5.2
GTEX-13JVG-0011-R1a-SM-5KM32 5.1
GTEX-13NYS-0011-R1b-SM-5MR55 5.0
GTEX-13OW7-0011-R1b-SM-5L3HF 4.9
GTEX-13112-0011-R1b-SM-5HL7K 4.9
GTEX-12WSM-0011-R1a-SM-5LZW6 4.9
GTEX-12WSH-0011-R1a-SM-5GU5V 4.9
GTEX-13NZA-0011-R1b-SM-5LUAF 4.7
GTEX-13SLW-0011-R1a-SM-5S2W7 4.5
GTEX-12WSB-0011-R1b-SM-5P9EY 4.3
GTEX-11ZTS-0011-R1a-SM-5BC71 4.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 4.0
GTEX-ZVZQ-0011-R1a-SM-57WBU 3.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 3.6
GTEX-YJ89-0011-R1a-SM-4RGLS 3.5
GTEX-145LU-0011-R1a-SM-5Q5CE 3.1
GTEX-NL3H-0011-R1a-SM-48TDJ 3.0
GTEX-144GO-0011-R1a-SM-5PNWO 2.9
GTEX-13FHP-0011-R1b-SM-5K7XL 2.6
GTEX-13CF2-0011-R1a-SM-5LZY1 2.6
GTEX-139T8-0011-R1a-SM-5HL75 2.4
GTEX-13PDP-0011-R1a-SM-5PNX5 1.8
GTEX-ZF28-0011-R1a-SM-4WWD1 1.8
GTEX-13FTY-0011-R1a-SM-5LZXE 1.7
GTEX-ZE7O-0011-R1a-SM-57WDM 1.7
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

55.8

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 55.8
FF:10169-103B7 60 years, female 74.7
FF:10153-102I9 76 years, female 52.8
FF:10374-105G5 89 years, female 39.8

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.