We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
NPC1
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:9.0RPKM
FANTOM5:91.9Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA026618

 

Antibody CAB070132

 

Glial cells

High   Medium  

Neuronal cells

Not detected   Medium  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

9.0

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 9.0
Samples: 94

Max RPKM: 28.5
Min RPKM: 1.3
Std RPKM: 5.8
Median RPKM: 7.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 28.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 25.7
GTEX-UTHO-0011-R1A-SM-3GIJO 23.3
GTEX-13N1W-0011-R1b-SM-5MR4T 22.0
GTEX-13G51-0011-R1a-SM-5LZYR 21.7
GTEX-XMD1-0011-R1A-SM-4AT4C 20.4
GTEX-WZTO-0011-R1B-SM-3NMAR 19.9
GTEX-13S7M-0011-R1b-SM-5PNZE 19.7
GTEX-13OVL-0011-R1a-SM-5L3H5 17.8
GTEX-11GSO-0011-R1b-SM-57WD3 17.5
GTEX-13QJC-0011-R1b-SM-5S2UU 16.4
GTEX-P44H-0011-R1A-SM-3NM8J 15.7
GTEX-13JVG-0011-R1a-SM-5KM32 15.3
GTEX-1212Z-0011-R1b-SM-5BC72 15.1
GTEX-QVUS-0011-R1A-SM-3GAD2 14.4
GTEX-13OW5-0011-R1b-SM-5L3GE 14.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 13.7
GTEX-13NZA-0011-R1b-SM-5LUAF 13.5
GTEX-X4XX-0011-R1B-SM-3P622 13.4
GTEX-NPJ8-0011-R1a-SM-33HCB 13.3
GTEX-145LS-0011-R1b-SM-5PNUP 13.3
GTEX-13OW6-0011-R1a-SM-5L3HQ 13.1
GTEX-13N2G-0011-R1b-SM-5MR3G 12.9
GTEX-T6MN-0011-R1A-SM-32QOY 12.8
GTEX-13JUV-0011-R1a-SM-5LZY4 12.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 12.4
GTEX-ZAB4-0011-R1a-SM-4RGNO 12.4
GTEX-12WSB-0011-R1b-SM-5P9EY 11.6
GTEX-ZUA1-0011-R1a-SM-4YCE2 11.3
GTEX-QVJO-0011-R1A-SM-2S1QI 11.2
GTEX-N7MT-0011-R1a-SM-5SI7S 10.9
GTEX-12WSF-0011-R1a-SM-5DUVI 10.4
GTEX-WL46-0011-R1A-SM-3LK6M 10.2
GTEX-XOTO-0011-R1B-SM-4B65C 10.0
GTEX-13NYS-0011-R1b-SM-5MR55 9.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 9.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 9.5
GTEX-11UD1-0011-R1b-SM-5BC7D 9.3
GTEX-12WSH-0011-R1a-SM-5GU5V 9.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 8.9
GTEX-13X6I-0011-R1b-SM-5PNZC 8.8
GTEX-PVOW-0011-R1A-SM-32PL6 8.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 8.2
GTEX-1313W-0011-R1b-SM-5EQ4A 7.9
GTEX-QDT8-0011-R1A-SM-32PKS 7.9
GTEX-132Q8-0011-R1a-SM-5EGLK 7.4
GTEX-X585-0011-R1B-SM-46MVE 7.3
GTEX-T5JC-0011-R1A-SM-32PM6 7.0
GTEX-13FHO-0011-R1b-SM-5KLZG 6.8
GTEX-NPJ7-0011-R1a-SM-3GACT 6.7
GTEX-13OW8-0011-R1a-SM-5L3HI 6.6
GTEX-11ONC-0011-R1a-SM-57WD4 6.5
GTEX-WWYW-0011-R1A-SM-3TW8G 6.4
GTEX-131YS-0011-R1a-SM-5DUXC 6.3
GTEX-14ASI-0011-R1b-SM-5S2TY 6.2
GTEX-N7MS-0011-R1a-SM-2HMJG 6.2
GTEX-QMR6-0011-R1A-SM-32PKW 6.2
GTEX-PWO3-0011-R1A-SM-2I5EW 5.7
GTEX-WVLH-0011-R1A-SM-4MVOK 5.6
GTEX-S7SE-0011-R1A-SM-2XCDE 5.4
GTEX-145LU-0011-R1a-SM-5Q5CE 5.3
GTEX-11ZTS-0011-R1a-SM-5BC71 5.3
GTEX-13OW7-0011-R1b-SM-5L3HF 5.1
GTEX-13PDP-0011-R1a-SM-5PNX5 5.0
GTEX-131XH-0011-R1a-SM-5DUWA 5.0
GTEX-RNOR-0011-R1A-SM-5SI8F 4.9
GTEX-R55E-0011-R1A-SM-2TC6N 4.9
GTEX-YJ89-0011-R1a-SM-4RGLS 4.8
GTEX-13SLW-0011-R1a-SM-5S2W7 4.8
GTEX-139TT-0011-R1a-SM-5LZVD 4.5
GTEX-12WSM-0011-R1a-SM-5LZW6 4.5
GTEX-13FXS-0011-R1a-SM-5K7U6 4.5
GTEX-13FLW-0011-R1b-SM-5LZX2 4.5
GTEX-YFC4-0011-R1a-SM-4V6EH 4.5
GTEX-12WSD-0011-R1b-SM-5LZVY 4.3
GTEX-13NYB-0011-R1b-SM-5KM4F 3.9
GTEX-144GO-0011-R1a-SM-5PNWO 3.9
GTEX-1399T-0011-R1b-SM-5DUWN 3.6
GTEX-12WSE-0011-R1b-SM-5GU4V 3.5
GTEX-ZVZQ-0011-R1a-SM-57WBU 3.5
GTEX-144GL-0011-R1a-SM-5PNZ5 3.4
GTEX-13112-0011-R1b-SM-5HL7K 3.2
GTEX-13CF2-0011-R1a-SM-5LZY1 3.2
GTEX-13O3O-0011-R1b-SM-5KM2K 3.0
GTEX-NL3H-0011-R1a-SM-48TDJ 2.9
GTEX-TSE9-0011-R1A-SM-3DB7E 2.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 2.5
GTEX-145MH-0011-R1b-SM-5PNWY 2.5
GTEX-ZF28-0011-R1a-SM-4WWD1 2.4
GTEX-139T8-0011-R1a-SM-5HL75 2.2
GTEX-13FTY-0011-R1a-SM-5LZXE 1.9
GTEX-13FHP-0011-R1b-SM-5K7XL 1.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 1.6
GTEX-ZE7O-0011-R1a-SM-57WDM 1.3
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

91.9

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 91.9
FF:10153-102I9 76 years, female 146.9
FF:10169-103B7 60 years, female 87.0
FF:10374-105G5 89 years, female 41.8

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.