We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
NFIC
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:17.6TPM
GTEx:23.2RPKM
FANTOM5:89.6Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA052625

 

Antibody CAB004300

 

Antibody CAB004674

 

Adipocytes

Not detected   Medium   Medium  

Glandular cells

Medium   Medium   High  

Myoepithelial cells

Medium   Medium   High  
     
     
     

BREAST - HPA RNA-seq

Average TPM

17.6

overview Female, age 52
Sample 1
TPM: 20.5
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 18.8
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 20.6
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 10.4
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

23.2

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 23.2
Samples: 214

Max RPKM: 35.6
Min RPKM: 9.8
Std RPKM: 5.3
Median RPKM: 22.7
GTEX-YB5K-1626-SM-5IFIN 35.6
GTEX-ZA64-1526-SM-5CVMD 35.1
GTEX-139T6-1626-SM-5PNYZ 33.9
GTEX-13FTW-1426-SM-5LZWZ 33.8
GTEX-1211K-1926-SM-5EQLB 33.7
GTEX-12BJ1-1826-SM-5HL9N 33.7
GTEX-S4UY-0726-SM-4AD6X 33.7
GTEX-Y5V6-2126-SM-4WWFX 33.7
GTEX-S341-1526-SM-4AD6K 32.8
GTEX-ZPIC-1126-SM-5BC7F 32.7
GTEX-13W3W-1226-SM-5LU4H 32.5
GTEX-ZF29-1926-SM-5S2P1 32.5
GTEX-11EM3-1326-SM-5N9C6 32.4
GTEX-11ZTT-2326-SM-5EQLG 32.4
GTEX-ZZPU-0626-SM-5E43T 32.1
GTEX-XUJ4-1926-SM-4BOOV 32.0
GTEX-ZDTT-2126-SM-5S2OJ 31.8
GTEX-YFCO-1826-SM-4W1YH 31.7
GTEX-XBED-1626-SM-47JYN 31.3
GTEX-ZQUD-1926-SM-51MSA 31.2
GTEX-U412-1826-SM-4DXTJ 31.1
GTEX-XGQ4-0926-SM-4AT4U 31.0
GTEX-11P7K-0726-SM-5EGKX 30.9
GTEX-XUZC-1626-SM-4BRVP 30.8
GTEX-Y8LW-1626-SM-5IFHX 30.6
GTEX-RWS6-1926-SM-47JXY 30.5
GTEX-11I78-2226-SM-5PNYA 30.4
GTEX-YEC3-1026-SM-5IFI5 30.2
GTEX-133LE-1726-SM-5K7VQ 29.9
GTEX-R55F-1726-SM-2TF4R 29.9
GTEX-ZEX8-2226-SM-57WC6 29.6
GTEX-14E6E-1326-SM-5S2NR 29.5
GTEX-1399U-1826-SM-5PNZ1 29.2
GTEX-ZDYS-1126-SM-5K7UB 29.0
GTEX-ZXES-0826-SM-5E43C 29.0
GTEX-12WSK-2226-SM-5GCO5 28.9
GTEX-13D11-1026-SM-5IJFB 28.7
GTEX-13FHO-0826-SM-5L3E8 28.6
GTEX-145MN-1926-SM-5SIAI 28.6
GTEX-ZLV1-1426-SM-4WWES 28.3
GTEX-11LCK-2426-SM-5HL5F 28.1
GTEX-11P82-1326-SM-5HL62 28.1
GTEX-12WSN-1326-SM-5GCNT 28.1
GTEX-ZU9S-1926-SM-5NQBP 28.1
GTEX-145LT-0726-SM-5S2VM 28.0
GTEX-WYJK-1326-SM-3NB2T 28.0
GTEX-ZZ64-1226-SM-5E43R 28.0
GTEX-Y9LG-1426-SM-5IFJZ 27.9
GTEX-Y3I4-1526-SM-4TT7K 27.5
GTEX-ZQG8-0726-SM-5P9H9 27.4
GTEX-13O3Q-2226-SM-5KM4O 27.3
GTEX-147F4-2826-SM-5NQBN 27.2
GTEX-11DXZ-1926-SM-5GZZL 27.0
GTEX-T6MO-0326-SM-32QOK 26.9
GTEX-ZV7C-1826-SM-5NQ83 26.9
GTEX-R55D-0826-SM-48FEA 26.8
GTEX-1122O-1226-SM-5H113 26.6
GTEX-SE5C-2126-SM-4BRUJ 26.6
GTEX-S4Q7-1126-SM-4AD6R 26.4
GTEX-ZV6S-1826-SM-5NQ8D 26.3
GTEX-Y5LM-1726-SM-4VDSX 26.2
GTEX-131YS-0626-SM-5EGKL 26.0
GTEX-13OW5-2226-SM-5L3HC 26.0
GTEX-U3ZH-1426-SM-4DXSR 25.8
GTEX-X261-0626-SM-3NMD9 25.6
GTEX-13FTX-1126-SM-5N9EN 25.3
GTEX-UJHI-1426-SM-3DB9C 25.3
GTEX-XUW1-2326-SM-4BOO5 25.3
GTEX-13NZB-2126-SM-5MR4Y 25.2
GTEX-ZY6K-1626-SM-5GZWV 25.1
GTEX-11GS4-2126-SM-5A5KR 25.0
GTEX-11EMC-2026-SM-5A5JV 24.9
GTEX-Y5V5-2126-SM-4WWFO 24.9
GTEX-ZC5H-2626-SM-5J2MG 24.9
GTEX-117YX-1426-SM-5H12H 24.8
GTEX-13N1W-0626-SM-5MR4U 24.8
GTEX-11TT1-2126-SM-5GU5Y 24.7
GTEX-132AR-0826-SM-5EGK6 24.7
GTEX-13NZ8-0126-SM-5IJCT 24.6
GTEX-X4XY-0926-SM-4E3JD 24.6
GTEX-QDT8-0626-SM-48TYW 24.5
GTEX-S4P3-1326-SM-4AD6V 24.5
GTEX-X4EP-2926-SM-3P5YQ 24.5
GTEX-ZTX8-1226-SM-4YCE9 24.4
GTEX-WI4N-1426-SM-3LK7H 24.3
GTEX-QEG5-0726-SM-4R1JQ 24.2
GTEX-U3ZN-1926-SM-4DXSG 24.2
GTEX-UPK5-2326-SM-3P5Z8 24.1
GTEX-11EI6-0626-SM-5985T 24.0
GTEX-11EQ9-1826-SM-5Q5AJ 24.0
GTEX-WYBS-0926-SM-3NM94 24.0
GTEX-QMRM-1626-SM-4R1KV 23.9
GTEX-ZYT6-0126-SM-5E45J 23.9
GTEX-X15G-1626-SM-3NMB3 23.7
GTEX-Y114-2026-SM-4TT7L 23.7
GTEX-13NZ9-1026-SM-5MR5K 23.5
GTEX-T5JC-2126-SM-32PMO 23.4
GTEX-13113-1726-SM-5GCOO 23.3
GTEX-WXYG-2226-SM-4E3IM 23.3
GTEX-146FH-0826-SM-5SI8T 23.2
GTEX-139TU-0626-SM-5KM3X 23.1
GTEX-XMD1-0826-SM-4AT52 23.1
GTEX-12ZZX-1126-SM-5EGKB 23.0
GTEX-SIU7-1626-SM-4BRUK 23.0
GTEX-T6MN-0726-SM-32PML 23.0
GTEX-11TUW-1826-SM-5BC5D 22.9
GTEX-XOT4-0726-SM-4GIAW 22.9
GTEX-TKQ1-0226-SM-33HB5 22.6
GTEX-11NSD-0926-SM-5N9DR 22.5
GTEX-13O61-1826-SM-5KM4I 22.5
GTEX-TMMY-0726-SM-33HBE 22.4
GTEX-YB5E-1726-SM-5IFJ3 22.2
GTEX-132NY-0826-SM-5K7Y7 22.1
GTEX-T5JW-2026-SM-4DM63 22.1
GTEX-ZVT4-1026-SM-57WC4 22.1
GTEX-11OF3-1926-SM-59889 22.0
GTEX-1269C-2426-SM-5FQSN 22.0
GTEX-ZT9W-2026-SM-51MRA 22.0
GTEX-QVJO-1826-SM-447C9 21.9
GTEX-144GM-0926-SM-5O994 21.8
GTEX-111YS-1926-SM-5GICC 21.7
GTEX-YFC4-1426-SM-5IFJG 21.7
GTEX-ZVE2-1226-SM-5NQ8R 21.7
GTEX-11ZUS-0826-SM-5FQUY 21.5
GTEX-XYKS-1326-SM-4BRUN 21.5
GTEX-S32W-2026-SM-4AD6E 21.4
GTEX-ZVT2-1826-SM-5NQ8W 21.4
GTEX-11WQK-2426-SM-5GU5C 21.3
GTEX-139T8-0826-SM-5L3DE 21.3
GTEX-RUSQ-2026-SM-4GIAK 21.3
GTEX-Y3IK-2326-SM-4WWDT 21.3
GTEX-13O3O-0826-SM-5K7WE 21.2
GTEX-ZF2S-2026-SM-5E461 21.2
GTEX-13CF3-2126-SM-5IFJP 21.1
GTEX-13W46-0826-SM-5LU3H 21.1
GTEX-11DXY-2326-SM-5GICW 20.9
GTEX-13CF2-2026-SM-5K7VI 20.9
GTEX-144GL-2026-SM-5LU3O 20.9
GTEX-U8XE-0826-SM-4E3J1 20.8
GTEX-XQ3S-1326-SM-4BOPQ 20.8
GTEX-12KS4-0126-SM-5Q5A5 20.6
GTEX-1314G-1226-SM-5BC6D 20.6
GTEX-S33H-0326-SM-4AD6N 20.6
GTEX-WFON-1826-SM-3GILG 20.6
GTEX-WYVS-1726-SM-3NMAY 20.6
GTEX-R3RS-0626-SM-48FE1 20.5
GTEX-12WSM-1726-SM-5BC6J 20.4
GTEX-131XW-0726-SM-5EGK3 20.3
GTEX-13O3P-0826-SM-5L3DH 20.3
GTEX-1192X-2326-SM-5987X 20.2
GTEX-ZLFU-2126-SM-4WWEV 20.1
GTEX-XQ8I-2426-SM-4WAXY 20.0
GTEX-YJ8O-2226-SM-5IFHW 19.9
GTEX-13N11-1726-SM-5J1OJ 19.8
GTEX-VUSG-2226-SM-4KKZO 19.8
GTEX-QEL4-2126-SM-447AE 19.7
GTEX-REY6-2426-SM-48FF5 19.7
GTEX-145MO-0826-SM-5NQBL 19.6
GTEX-11P81-1926-SM-5BC53 19.5
GTEX-12WSB-0626-SM-59HJO 19.5
GTEX-R53T-1526-SM-48FEK 19.5
GTEX-ZAJG-0626-SM-5HL8X 19.5
GTEX-13PL6-2926-SM-5L3I2 19.3
GTEX-Q2AG-0326-SM-48U1O 19.3
GTEX-ZDXO-0126-SM-5S2ND 19.3
GTEX-13S86-1226-SM-5S2OA 19.2
GTEX-RU72-0626-SM-46MUI 19.2
GTEX-ZVTK-0326-SM-51MRR 19.2
GTEX-ZYWO-2326-SM-5GZY4 19.2
GTEX-11WQC-1726-SM-5GU4W 18.9
GTEX-132Q8-1426-SM-5EGK7 18.9
GTEX-ZUA1-1526-SM-59HLS 18.9
GTEX-Y8E4-1626-SM-5S2MW 18.8
GTEX-13QIC-2326-SM-5LU5N 18.6
GTEX-11DXW-0626-SM-5N9ER 18.5
GTEX-13FTY-2226-SM-5J1ND 18.5
GTEX-13PVQ-1026-SM-5KM3M 18.5
GTEX-TKQ2-1826-SM-33HB2 18.4
GTEX-13OW8-0226-SM-5K7UP 18.2
GTEX-XV7Q-2326-SM-4BRVZ 17.9
GTEX-ZYFC-0826-SM-5E44K 17.9
GTEX-WRHU-0326-SM-3MJFY 17.7
GTEX-XMD2-0926-SM-4WWEF 17.7
GTEX-ZTTD-1026-SM-51MRD 17.5
GTEX-T2IS-1526-SM-32QPR 17.4
GTEX-XMK1-1126-SM-4IHJ8 17.4
GTEX-PSDG-1626-SM-48TCQ 17.3
GTEX-ZF3C-2326-SM-5S2MZ 17.1
GTEX-11PRG-0826-SM-5EQ6A 17.0
GTEX-WY7C-2726-SM-3NB3P 17.0
GTEX-ZYW4-0826-SM-5GIDG 16.9
GTEX-1117F-2826-SM-5GZXL 16.7
GTEX-11NV4-2026-SM-5N9DG 16.6
GTEX-S7SE-0826-SM-4AT4D 16.6
GTEX-14AS3-1626-SM-5S2OY 16.4
GTEX-Y111-2026-SM-4SOJA 16.4
GTEX-ZVZQ-0826-SM-51MRF 16.4
GTEX-11DZ1-0326-SM-5N9BN 16.3
GTEX-11ONC-2126-SM-5HL6E 16.0
GTEX-1313W-0826-SM-5EQ4T 16.0
GTEX-11O72-2126-SM-5N9FO 15.6
GTEX-11GSO-1926-SM-5A5K3 15.4
GTEX-TML8-1226-SM-32QON 15.2
GTEX-WOFL-0826-SM-3MJG1 14.9
GTEX-14753-2426-SM-5LU8U 14.8
GTEX-145ME-1526-SM-5Q5F2 14.7
GTEX-117XS-1926-SM-5GICO 14.3
GTEX-ZAB4-2526-SM-5HL8M 14.2
GTEX-ZWKS-2826-SM-5NQ74 14.0
GTEX-VJWN-0726-SM-3GIJ8 12.0
GTEX-T2YK-2226-SM-32QPT 11.7
GTEX-14ABY-2126-SM-5QGQZ 11.1
GTEX-UTHO-1026-SM-3GAF7 10.6
GTEX-W5X1-2326-SM-3GIL6 9.8
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

89.6

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 89.6
FF:10080-102A8 77 years, female 89.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.