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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:33.5TPM
GTEx:15.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Medium
Neuronal cells:Medium
Neuropil:Not detected
 

Antibody staining

Antibody HPA052625

 

Antibody CAB004300

 

Antibody CAB004674

 

Endothelial cells

Low   Low   Low  

Glial cells

Medium   Medium   Medium  

Neuronal cells

Medium   Medium   Medium  

Neuropil

Not detected   Not detected   Not detected  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

33.5

N/A Male, age 5
Sample 1
TPM: 31.9
overview Female, age 40
Sample 2
TPM: 37.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 31.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

15.6

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 16.4
Samples: 114

Max RPKM: 22.8
Min RPKM: 8.9
Std RPKM: 2.7
Median RPKM: 16.7
GTEX-13FXS-3126-SM-5J2NN 22.8
GTEX-1128S-2726-SM-5H12C 22.3
GTEX-QVJO-1426-SM-2S1QY 22.3
GTEX-11ZUS-2926-SM-5FQSL 21.7
GTEX-11NV4-2126-SM-5N9DS 21.3
GTEX-Q2AG-2926-SM-2HMJ3 21.0
GTEX-ZZPT-3026-SM-5GZXH 20.7
GTEX-11OF3-2926-SM-5HL78 20.3
GTEX-13O3Q-2926-SM-5KM45 20.3
GTEX-WWYW-3126-SM-3NB39 20.3
GTEX-Z93S-2926-SM-57WB9 20.3
GTEX-NPJ8-1526-SM-2D7VU 19.7
GTEX-12ZZX-2926-SM-5GCOQ 19.4
GTEX-12WSC-3026-SM-5GCNF 19.2
GTEX-Y111-2726-SM-4TT3N 19.2
GTEX-14BMV-3026-SM-5S2PQ 19.1
GTEX-1313W-3126-SM-5LZUI 19.0
GTEX-WHSE-3026-SM-3P5ZH 18.9
GTEX-13NYS-3126-SM-5KLYV 18.8
GTEX-R55F-1326-SM-5S2V4 18.8
GTEX-12126-1026-SM-5P9JJ 18.7
GTEX-12ZZY-3026-SM-5GCOU 18.7
GTEX-X4XX-3026-SM-3NMB2 18.7
GTEX-11DXY-3226-SM-5GIDE 18.3
GTEX-RNOR-2326-SM-2TF4I 18.2
GTEX-131YS-3126-SM-5KLYT 18.1
GTEX-13OVH-3026-SM-5MR4N 18.1
GTEX-14ASI-3026-SM-5S2PN 17.9
GTEX-RU72-3026-SM-5SI7Y 17.9
GTEX-11PRG-2926-SM-5987A 17.8
GTEX-13JVG-3126-SM-5L3FH 17.8
GTEX-1399T-3026-SM-5KLZC 17.7
GTEX-1192X-3126-SM-5N9BY 17.6
GTEX-11GSO-2926-SM-5HL73 17.6
GTEX-ZE7O-3126-SM-5HL5X 17.6
GTEX-145MF-2726-SM-5O995 17.5
GTEX-14A5I-2926-SM-5Q5CQ 17.5
GTEX-OXRN-2426-SM-2I5EQ 17.5
GTEX-117XS-3026-SM-5N9CA 17.4
GTEX-13O3O-3126-SM-5KM3H 17.3
GTEX-T5JC-2426-SM-3NMDB 17.3
GTEX-XOTO-3026-SM-4B65M 17.3
GTEX-ZUA1-3026-SM-59HJC 17.3
GTEX-11NUK-2926-SM-5A5MD 17.2
GTEX-13X6K-2926-SM-5Q5D5 17.2
GTEX-144FL-3026-SM-5O99C 17.1
GTEX-YFC4-3126-SM-5PNV6 17.1
GTEX-11EI6-3026-SM-5GZZO 17.0
GTEX-11EMC-3226-SM-5EGKW 17.0
GTEX-11O72-2926-SM-5BC4V 17.0
GTEX-144GL-3026-SM-5Q5CW 17.0
GTEX-13JUV-2926-SM-5LZX7 16.9
GTEX-13S7M-3126-SM-5RQJQ 16.9
GTEX-Y8DK-0826-SM-4TT3T 16.9
GTEX-13VXU-2926-SM-5LU5C 16.8
GTEX-145MH-3026-SM-5Q5DZ 16.8
GTEX-11ONC-2926-SM-5P9JM 16.7
GTEX-ZVT3-3026-SM-5E43N 16.7
GTEX-13IVO-2926-SM-5L3CZ 16.6
GTEX-13PL6-3126-SM-5LUAR 16.6
GTEX-X585-3026-SM-46MWF 16.6
GTEX-13OVJ-2826-SM-5L3GW 16.5
GTEX-13OW6-3026-SM-5J2MI 16.4
GTEX-13FHP-3026-SM-5IJBS 16.2
GTEX-11OC5-0726-SM-5P9JK 16.1
GTEX-WL46-2926-SM-3LK82 16.1
GTEX-YJ89-3026-SM-5IFJI 16.1
GTEX-ZYFD-3026-SM-5E44C 16.1
GTEX-PWO3-0926-SM-2I5EY 16.0
GTEX-12ZZZ-3026-SM-5BC67 15.9
GTEX-131XW-3126-SM-5LZUC 15.9
GTEX-NPJ7-2726-SM-2I3FT 15.9
GTEX-12WSD-3126-SM-5HL7P 15.7
GTEX-11GS4-3126-SM-5A5LH 15.6
GTEX-12ZZW-2926-SM-5LZUP 15.6
GTEX-132Q8-3026-SM-5PNVG 15.4
GTEX-13OW7-3026-SM-5L3GY 15.2
GTEX-147GR-3026-SM-5S2ML 15.2
GTEX-12WSH-3026-SM-5CVNI 15.1
GTEX-13NYC-2826-SM-5K7WR 15.0
GTEX-13PVQ-3026-SM-5SI93 14.9
GTEX-WVLH-3026-SM-3MJG9 14.9
GTEX-WZTO-2926-SM-3NM9I 14.9
GTEX-145MG-3026-SM-5RQJA 14.8
GTEX-145LS-3126-SM-5Q5BY 14.7
GTEX-13G51-3026-SM-5IJB8 14.6
GTEX-13SLX-3126-SM-5S2Q5 14.6
GTEX-ZAK1-3026-SM-5S2MJ 14.6
GTEX-13QIC-2926-SM-5J2NF 14.3
GTEX-1445S-3026-SM-5O9BR 14.3
GTEX-11WQK-3026-SM-5EQL6 14.1
GTEX-111FC-3126-SM-5GZZ2 14.0
GTEX-11DXW-1126-SM-5H12Q 14.0
GTEX-11TTK-2926-SM-5PNYP 14.0
GTEX-T6MN-2626-SM-32PMQ 13.9
GTEX-13X6J-3026-SM-5Q5CU 13.8
GTEX-T2IS-3026-SM-32QPM 13.6
GTEX-12WSA-2926-SM-5EQ4D 13.4
GTEX-13OW8-2826-SM-5L3GC 13.4
GTEX-PVOW-2526-SM-2XCF7 13.4
GTEX-XLM4-3026-SM-4AT6L 13.4
GTEX-11GSP-3226-SM-5986O 13.2
GTEX-13FHO-3026-SM-5J1O9 13.2
GTEX-N7MT-1126-SM-5SI7V 13.2
GTEX-139T8-1026-SM-5J2MC 13.1
GTEX-QVUS-2826-SM-3GADB 12.8
GTEX-ZAJG-3126-SM-5HL9J 12.7
GTEX-13FLW-1426-SM-5K7YE 11.5
GTEX-13NYB-3026-SM-5IJD7 11.4
GTEX-1117F-3226-SM-5N9CT 11.0
GTEX-TSE9-3026-SM-3DB76 10.1
GTEX-UTHO-3026-SM-3GAFB 10.1
GTEX-QDT8-2926-SM-32PKC 9.5
GTEX-QMR6-1426-SM-32PLA 8.9
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 14.7
Samples: 108

Max RPKM: 23.8
Min RPKM: 5.8
Std RPKM: 3.4
Median RPKM: 14.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC 23.8
GTEX-N7MS-0011-R10A-SM-2HMJK 23.0
GTEX-Q2AG-0011-R10A-SM-2HMLA 23.0
GTEX-NL4W-0011-R10A-SM-2I3DY 22.5
GTEX-12WSE-0011-R10b-SM-5P9JV 20.3
GTEX-131YS-0011-R10b-SM-5EQ5N 20.2
GTEX-13G51-0011-R10b-SM-5LZYF 19.6
GTEX-13OW6-0011-R10a-SM-5L3HE 19.5
GTEX-13OW7-0011-R10a-SM-5L3H3 19.5
GTEX-X4XX-0011-R10B-SM-46MWO 19.4
GTEX-12WSM-0011-R10a-SM-5DUWV 19.3
GTEX-13FXS-0011-R10a-SM-5J2MA 19.3
GTEX-13S7M-0011-R10b-SM-5PNZB 19.2
GTEX-13OVL-0011-R10a-SM-5L3GS 19.1
GTEX-13SLW-0011-R10a-SM-5S2UI 18.8
GTEX-QVJO-0011-R10A-SM-2S1QJ 18.7
GTEX-NPJ8-0011-R10A-SM-2YUMO 18.5
GTEX-11ZUS-0011-R10b-SM-5BC79 18.4
GTEX-12126-0011-R10b-SM-5BC6T 18.3
GTEX-NL3H-0011-R10A-SM-2I3E9 18.3
GTEX-13N1W-0011-R10b-SM-5MR4H 18.2
GTEX-145LS-0011-R10a-SM-5PNUQ 17.9
GTEX-13QJC-0011-R10a-SM-5SI63 17.5
GTEX-145MH-0011-R10b-SM-5PNUK 17.4
GTEX-ZF28-0011-R10a-SM-4WWEH 17.2
GTEX-11WQC-0011-R10a-SM-57WCT 17.1
GTEX-ZXG5-0011-R10a-SM-57WDD 17.1
GTEX-13OW8-0011-R10a-SM-5L3H6 16.8
GTEX-13FLV-0011-R10b-SM-5LZZ2 16.7
GTEX-11H98-0011-R10b-SM-5NQ98 16.6
GTEX-14ASI-0011-R10b-SM-5S2VZ 16.6
GTEX-Y8DK-0011-R10A-SM-4SOK1 16.6
GTEX-13FTZ-0011-R10b-SM-5KLZS 16.3
GTEX-13JUV-0011-R10b-SM-5LZXR 16.2
GTEX-145MG-0011-R10a-SM-5PNWG 16.2
GTEX-1477Z-0011-R10b-SM-5S2RF 16.2
GTEX-147GR-0011-R10b-SM-5S2UM 16.1
GTEX-N7MT-0011-R10A-SM-2I3E1 16.1
GTEX-ZVZQ-0011-R10b-SM-51MRT 16.1
GTEX-147F4-0011-R10b-SM-5S2WC 15.9
GTEX-WZTO-0011-R10B-SM-4E3KB 15.9
GTEX-13X6J-0011-R10b-SM-5PNWA 15.5
GTEX-12ZZX-0011-R10b-SM-5DUWK 15.4
GTEX-13FHO-0011-R10b-SM-5J2MM 15.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 15.4
GTEX-T5JC-0011-R10A-SM-32PM2 15.3
GTEX-13O3Q-0011-R10b-SM-5KM39 14.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 14.9
GTEX-14BIN-0011-R10a-SM-5S2UA 14.8
GTEX-1313W-0011-R10b-SM-5DUXA 14.7
GTEX-13X6I-0011-R10a-SM-5PNWI 14.7
GTEX-13X6K-0011-R10a-SM-5P9JR 14.7
GTEX-145LU-0011-R10a-SM-5PNWJ 14.7
GTEX-12WSC-0011-R10a-SM-5GU57 14.5
GTEX-13CZV-0011-R10b-SM-5LZYD 14.5
GTEX-WL46-0011-R10A-SM-3MJFQ 14.5
GTEX-131XH-0011-R10a-SM-5EGLJ 14.4
GTEX-13QIC-0011-R10a-SM-5O9C7 14.2
GTEX-13SLX-0011-R10a-SM-5P9HV 14.2
GTEX-1445S-0011-R10a-SM-5PNWB 14.2
GTEX-12WSH-0011-R10a-SM-5LZUS 14.1
GTEX-YJ89-0011-R10a-SM-4SOK9 13.9
GTEX-XMD1-0011-R10A-SM-4AT4A 13.8
GTEX-132Q8-0011-R10b-SM-5DUWZ 13.7
GTEX-XLM4-0011-R10A-SM-4AT5P 13.7
GTEX-WWYW-0011-R10A-SM-3NB35 13.6
GTEX-X585-0011-R10A-SM-46MUY 13.6
GTEX-ZVT3-0011-R10b-SM-57WB6 13.5
GTEX-S7SE-0011-R10A-SM-2XCDF 13.4
GTEX-139TS-0011-R10a-SM-5K7TU 13.3
GTEX-OXRN-0011-R10A-SM-2I5GC 13.3
GTEX-13NYS-0011-R10a-SM-5MR4S 13.1
GTEX-13FLW-0011-R10b-SM-5LZZF 13.0
GTEX-14BIL-0011-R10a-SM-5SI75 13.0
GTEX-ZDXO-0011-R10a-SM-4WWD8 12.8
GTEX-12WSF-0011-R10a-SM-5LZVH 12.7
GTEX-13O3O-0011-R10a-SM-5LUA9 12.7
GTEX-13N2G-0011-R10a-SM-5MR34 12.5
GTEX-WVLH-0011-R10A-SM-3MJFM 12.5
GTEX-11GSP-0011-R10a-SM-5NQ7J 12.4
GTEX-TSE9-0011-R10A-SM-3DB7O 12.3
GTEX-X261-0011-R10B-SM-4E3JT 12.3
GTEX-T6MN-0011-R10A-SM-32QP7 12.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 12.0
GTEX-14753-0011-R10b-SM-5S2WE 12.0
GTEX-11WQK-0011-R10a-SM-5BC6R 11.9
GTEX-12WSA-0011-R10b-SM-5P9ET 11.9
GTEX-OXRO-0011-R10A-SM-2I5EH 11.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 11.5
GTEX-YFC4-0011-R10a-SM-4SOK5 11.4
GTEX-13JVG-0011-R10b-SM-5KM2P 11.3
GTEX-ZV68-0011-R10a-SM-51MT7 11.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 11.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 11.1
GTEX-ZUA1-0011-R10a-SM-51MT6 10.9
GTEX-13IVO-0011-R10a-SM-5LZY3 10.8
GTEX-13NZA-0011-R10b-SM-5KM54 10.8
GTEX-ZAB4-0011-R10a-SM-4SOKH 10.6
GTEX-RVPU-0011-R10A-SM-2XCAH 10.4
GTEX-Z93S-0011-R10a-SM-4RGNM 10.4
GTEX-13NYB-0011-R10a-SM-5KM43 9.8
GTEX-X4EP-0011-R10B-SM-4QASJ 9.6
GTEX-QDT8-0011-R10A-SM-32PKG 9.5
GTEX-131XW-0011-R10a-SM-5DUVA 9.3
GTEX-QMR6-0011-R10A-SM-32PKO 8.6
GTEX-P44H-0011-R10A-SM-2XCEK 8.2
GTEX-QVUS-0011-R10A-SM-3GIK3 7.8
GTEX-12WSD-0011-R10b-SM-5GU79 5.8
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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