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TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:16.3TPM
GTEx:13.6RPKM
FANTOM5:115.9Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Medium
Cells in tubules:High
 

Antibody staining

Antibody HPA052625

 

Antibody CAB004300

 

Antibody CAB004674

 

Cells in glomeruli

Medium   Not detected   Not detected  

Cells in tubules

High   Not detected   Low  
     
     
     

KIDNEY - HPA RNA-seq

Average TPM

16.3

overview Female, age 58
Sample 1
TPM: 30.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 21.1
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 32.2
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 26.1
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 3.5
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 8.3
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 7.1
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 13.4
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 4.5
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

13.6

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 13.6
Samples: 32

Max RPKM: 24.1
Min RPKM: 6.2
Std RPKM: 4.5
Median RPKM: 14.3
GTEX-12696-0926-SM-5FQTV 24.1
GTEX-13OVI-1126-SM-5KLZF 22.0
GTEX-1399S-0526-SM-5IJG8 20.1
GTEX-ZVZP-0926-SM-5GIDB 19.1
GTEX-RN64-1626-SM-48FD7 18.7
GTEX-11TTK-1926-SM-5PNW8 18.1
GTEX-13112-2126-SM-5GCO4 17.2
GTEX-ZYT6-2226-SM-5GIC9 17.0
GTEX-ZYFG-1626-SM-5GZYY 16.9
GTEX-147F4-2626-SM-5Q5CS 16.8
GTEX-145MN-0326-SM-5QGQI 15.9
GTEX-13RTJ-2226-SM-5S2Q1 14.9
GTEX-QLQW-1626-SM-4R1K1 14.8
GTEX-ZLFU-0926-SM-5P9F8 14.7
GTEX-XPVG-0526-SM-4B65N 14.6
GTEX-1497J-0826-SM-5NQAJ 14.3
GTEX-12WSG-0826-SM-5EQ5A 14.3
GTEX-11GS4-2326-SM-5A5KS 11.9
GTEX-13OVL-1826-SM-5KLZR 11.8
GTEX-Y5V6-2026-SM-5IFHO 11.6
GTEX-UPIC-1126-SM-4IHLO 11.5
GTEX-P4QS-1126-SM-3NMD5 11.3
GTEX-T5JC-1526-SM-4DM68 10.4
GTEX-QDVN-1626-SM-48TZC 10.2
GTEX-13O1R-2526-SM-5N9FW 9.3
GTEX-ZC5H-1726-SM-5HL7X 8.9
GTEX-13OW6-1826-SM-5N9F9 8.7
GTEX-N7MS-1626-SM-3LK5F 8.4
GTEX-11OF3-1326-SM-5N9FJ 7.7
GTEX-13NYB-1726-SM-5N9G2 7.3
GTEX-ZYFD-1526-SM-5NQ7T 6.8
GTEX-NPJ8-2226-SM-3TW8D 6.2
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

115.9

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 115.9
FF:10017-101C8 60,62,63 years, female 115.9

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