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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:43.0RPKM
FANTOM5:73.1Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Low
 

Antibody staining

Antibody HPA030047

 

Glial cells

Low  

Neuronal cells

Low  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

43.0

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 43.0
Samples: 117

Max RPKM: 77
Min RPKM: 15.2
Std RPKM: 9.8
Median RPKM: 43
GTEX-13OVJ-0011-R5a-SM-5P9H7 77.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 66.2
GTEX-13JVG-0011-R5a-SM-5MR4O 63.0
GTEX-13FLV-0011-R5a-SM-5LZWT 61.8
GTEX-T6MN-0011-R5A-SM-32QPD 58.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 57.3
GTEX-X261-0011-R5A-SM-3NMB4 57.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 56.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 56.2
GTEX-ZUA1-0011-R5b-SM-51MTG 56.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 54.8
GTEX-13G51-0011-R5a-SM-5L3EB 54.8
GTEX-13OVH-0011-R5b-SM-5KM4L 54.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 54.3
GTEX-13FLW-0011-R5a-SM-5LZX6 53.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 53.7
GTEX-TSE9-0011-R5A-SM-3DB7J 52.8
GTEX-11GSP-0011-R5a-SM-57WBE 52.6
GTEX-13NYB-0011-R5a-SM-5MR45 52.6
GTEX-11H98-0011-R5b-SM-57WCF 52.5
GTEX-132Q8-0011-R5a-SM-5IJDM 52.4
GTEX-13JUV-0011-R5a-SM-5LZY5 52.2
GTEX-131YS-0011-R5b-SM-5K7YB 51.8
GTEX-T5JC-0011-R5A-SM-32PLK 51.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 51.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 51.6
GTEX-R55E-0011-R5A-SM-2TC5N 51.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 51.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50.6
GTEX-WL46-0011-R5A-SM-3LK6V 50.6
GTEX-N7MS-0011-R5a-SM-2HMK8 49.7
GTEX-13OVL-0011-R5b-SM-5L3FU 48.7
GTEX-XOTO-0011-R5A-SM-4B657 48.3
GTEX-13NYS-0011-R5a-SM-5MR4D 48.1
GTEX-13X6K-0011-R5b-SM-5PNUE 48.0
GTEX-OHPN-0011-R5A-SM-2I5FF 47.9
GTEX-12WSA-0011-R5b-SM-5GU5I 46.7
GTEX-12WSB-0011-R5b-SM-5GU67 46.6
GTEX-P44H-0011-R5A-SM-2XCEX 46.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 46.4
GTEX-13X6I-0011-R5a-SM-5PNWW 46.1
GTEX-14BIM-0011-R5b-SM-5S2RM 45.8
GTEX-N7MT-0011-R5a-SM-2I3G6 45.7
GTEX-WVLH-0011-R5A-SM-3MJFW 45.6
GTEX-XMD1-0011-R5A-SM-4AT47 45.6
GTEX-13OW6-0011-R5a-SM-5O9BK 45.4
GTEX-13VXU-0011-R5a-SM-5O9D7 45.4
GTEX-1313W-0011-R5b-SM-5L3EP 45.3
GTEX-RU72-0011-R5A-SM-2TF6U 45.3
GTEX-X4XX-0011-R5A-SM-46MWN 44.9
GTEX-13CZV-0011-R5a-SM-5K7XA 44.8
GTEX-145MH-0011-R5a-SM-5P9JT 44.7
GTEX-NL4W-0011-R5a-SM-2I3GD 44.5
GTEX-QMR6-0011-R5A-SM-32PKT 44.3
GTEX-WZTO-0011-R5B-SM-3NMC5 44.2
GTEX-13OW5-0011-R5b-SM-5L3FR 43.9
GTEX-139TT-0011-R5b-SM-5K7W8 43.1
GTEX-139T8-0011-R5b-SM-5J1MO 43.0
GTEX-13OW7-0011-R5b-SM-5O9DM 43.0
GTEX-RVPU-0011-R5A-SM-2XCAD 42.7
GTEX-1445S-0011-R5a-SM-5PNUS 42.3
GTEX-S7SE-0011-R5A-SM-2XCDA 41.9
GTEX-WHSE-0011-R5A-SM-3P5ZO 41.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 41.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 40.5
GTEX-11NV4-0011-R5a-SM-5NQ88 40.3
GTEX-14ABY-0011-R5b-SM-5SI7B 40.3
GTEX-RVPV-0011-R5A-SM-2TF69 40.3
GTEX-12WSC-0011-R5b-SM-5CVNS 40.1
GTEX-ZE7O-0011-R5a-SM-57WBO 39.9
GTEX-12WSD-0011-R5b-SM-5CVNG 39.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 39.7
GTEX-13SLX-0011-R5a-SM-5O9BV 39.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 39.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 39.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 39.6
GTEX-1399T-0011-R5b-SM-5IJDK 38.8
GTEX-144GO-0011-R5a-SM-5PNUR 38.8
GTEX-WWYW-0011-R5A-SM-3NB3E 38.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 38.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 37.7
GTEX-144GL-0011-R5b-SM-5PNUJ 37.2
GTEX-QVJO-0011-R5A-SM-2S1QM 37.2
GTEX-13O3O-0011-R5b-SM-5KM44 36.9
GTEX-13X6J-0011-R5b-SM-5PNWT 36.9
GTEX-139TS-0011-R5b-SM-5J2MZ 36.6
GTEX-145LS-0011-R5a-SM-5SI65 36.3
GTEX-ZV68-0011-R5a-SM-4YCDW 36.2
GTEX-ZXG5-0011-R5b-SM-57WBN 36.1
GTEX-13112-0011-R5b-SM-5DUV8 35.9
GTEX-YFC4-0011-R5a-SM-4RGLR 35.5
GTEX-14BIN-0011-R5b-SM-5SI78 35.2
GTEX-11OF3-0011-R5a-SM-57WB4 34.9
GTEX-13S7M-0011-R5b-SM-5P9HS 34.6
GTEX-X585-0011-R5A-SM-46MVI 34.3
GTEX-12ZZX-0011-R5a-SM-5HL89 34.1
GTEX-13FHP-0011-R5b-SM-5LZY2 34.1
GTEX-ZVT3-0011-R5a-SM-51MSI 34.1
GTEX-13CIG-0011-R5b-SM-5L3F2 32.2
GTEX-YJ89-0011-R5a-SM-4V6GM 32.0
GTEX-1477Z-0011-R5b-SM-5PNUO 31.9
GTEX-OXRN-0011-R5A-SM-2I5EF 31.9
GTEX-13CF2-0011-R5a-SM-5LZWS 31.4
GTEX-11WQC-0011-R5a-SM-5BC74 31.3
GTEX-12WSF-0011-R5a-SM-5HL8K 30.3
GTEX-NL3H-0011-R5a-SM-2I3GB 30.3
GTEX-S7PM-0011-R5A-SM-3NM8G 28.0
GTEX-PVOW-0011-R5A-SM-32PL7 27.9
GTEX-11UD1-0011-R5b-SM-5P9FP 27.4
GTEX-12WSH-0011-R5b-SM-5P9F3 26.8
GTEX-13NZA-0011-R5b-SM-5KM4K 26.7
GTEX-NPJ7-0011-R5a-SM-33HBK 26.7
GTEX-145MG-0011-R5b-SM-5S2VU 26.3
GTEX-UTHO-0011-R5A-SM-3GIJD 24.5
GTEX-Z93S-0011-R5b-SM-4RGNI 22.5
GTEX-T2IS-0011-R5A-SM-32QP4 15.2
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

73.1

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 73.1
FF:10164-103B2 76 years, female 96.5
FF:10379-105H1 89 years, female 49.6

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