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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:70.8TPM
GTEx:52.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Not detected
 

Antibody staining

Antibody HPA030047

 

Endothelial cells

Not detected  

Glial cells

Not detected  

Neuronal cells

Low  

Neuropil

Not detected  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

70.8

N/A Male, age 5
Sample 1
TPM: 72.8
overview Female, age 40
Sample 2
TPM: 58.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 81.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

52.6

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 58.1
Samples: 114

Max RPKM: 83.3
Min RPKM: 28.1
Std RPKM: 10.4
Median RPKM: 58.3
GTEX-1192X-3126-SM-5N9BY 83.3
GTEX-12ZZY-3026-SM-5GCOU 82.9
GTEX-11ONC-2926-SM-5P9JM 82.6
GTEX-12ZZW-2926-SM-5LZUP 82.1
GTEX-X585-3026-SM-46MWF 81.5
GTEX-13FHO-3026-SM-5J1O9 78.3
GTEX-13QIC-2926-SM-5J2NF 77.6
GTEX-13OVJ-2826-SM-5L3GW 75.2
GTEX-13JVG-3126-SM-5L3FH 71.6
GTEX-13OVH-3026-SM-5MR4N 70.9
GTEX-145MG-3026-SM-5RQJA 69.8
GTEX-11OC5-0726-SM-5P9JK 69.1
GTEX-1313W-3126-SM-5LZUI 68.7
GTEX-11NUK-2926-SM-5A5MD 68.1
GTEX-13NYC-2826-SM-5K7WR 67.9
GTEX-ZYFD-3026-SM-5E44C 67.8
GTEX-14BMV-3026-SM-5S2PQ 67.7
GTEX-WL46-2926-SM-3LK82 66.9
GTEX-13FLW-1426-SM-5K7YE 66.6
GTEX-13FXS-3126-SM-5J2NN 66.3
GTEX-T5JC-2426-SM-3NMDB 66.3
GTEX-T6MN-2626-SM-32PMQ 66.1
GTEX-YJ89-3026-SM-5IFJI 66.1
GTEX-XLM4-3026-SM-4AT6L 65.7
GTEX-117XS-3026-SM-5N9CA 65.6
GTEX-132Q8-3026-SM-5PNVG 65.1
GTEX-11GS4-3126-SM-5A5LH 64.3
GTEX-Q2AG-2926-SM-2HMJ3 64.0
GTEX-13OW8-2826-SM-5L3GC 63.9
GTEX-XOTO-3026-SM-4B65M 63.8
GTEX-ZVT3-3026-SM-5E43N 63.8
GTEX-13SLX-3126-SM-5S2Q5 63.2
GTEX-13G51-3026-SM-5IJB8 63.1
GTEX-13JUV-2926-SM-5LZX7 62.8
GTEX-TSE9-3026-SM-3DB76 62.8
GTEX-ZUA1-3026-SM-59HJC 62.3
GTEX-1117F-3226-SM-5N9CT 62.2
GTEX-QVJO-1426-SM-2S1QY 62.2
GTEX-12WSD-3126-SM-5HL7P 61.2
GTEX-144GL-3026-SM-5Q5CW 61.2
GTEX-12ZZX-2926-SM-5GCOQ 61.0
GTEX-11GSO-2926-SM-5HL73 60.9
GTEX-13OW6-3026-SM-5J2MI 60.9
GTEX-WHSE-3026-SM-3P5ZH 60.7
GTEX-145MH-3026-SM-5Q5DZ 60.5
GTEX-11DXY-3226-SM-5GIDE 60.0
GTEX-Y111-2726-SM-4TT3N 60.0
GTEX-14A5I-2926-SM-5Q5CQ 59.8
GTEX-QVUS-2826-SM-3GADB 59.7
GTEX-131YS-3126-SM-5KLYT 59.3
GTEX-145LS-3126-SM-5Q5BY 59.2
GTEX-13PL6-3126-SM-5LUAR 59.0
GTEX-11EMC-3226-SM-5EGKW 58.9
GTEX-131XW-3126-SM-5LZUC 58.7
GTEX-13S7M-3126-SM-5RQJQ 58.7
GTEX-WZTO-2926-SM-3NM9I 58.5
GTEX-N7MT-1126-SM-5SI7V 58.3
GTEX-QMR6-1426-SM-32PLA 58.3
GTEX-14ASI-3026-SM-5S2PN 58.2
GTEX-ZZPT-3026-SM-5GZXH 58.1
GTEX-11GSP-3226-SM-5986O 57.9
GTEX-Z93S-2926-SM-57WB9 57.9
GTEX-12ZZZ-3026-SM-5BC67 57.7
GTEX-QDT8-2926-SM-32PKC 57.5
GTEX-R55F-1326-SM-5S2V4 57.4
GTEX-11EI6-3026-SM-5GZZO 57.1
GTEX-144FL-3026-SM-5O99C 57.1
GTEX-12WSA-2926-SM-5EQ4D 56.8
GTEX-12WSC-3026-SM-5GCNF 56.6
GTEX-WVLH-3026-SM-3MJG9 56.5
GTEX-X4XX-3026-SM-3NMB2 56.5
GTEX-11DXW-1126-SM-5H12Q 56.3
GTEX-111FC-3126-SM-5GZZ2 56.0
GTEX-WWYW-3126-SM-3NB39 55.9
GTEX-13VXU-2926-SM-5LU5C 55.5
GTEX-13O3O-3126-SM-5KM3H 55.3
GTEX-13NYB-3026-SM-5IJD7 54.6
GTEX-145MF-2726-SM-5O995 54.6
GTEX-ZE7O-3126-SM-5HL5X 54.6
GTEX-11PRG-2926-SM-5987A 54.4
GTEX-12126-1026-SM-5P9JJ 54.4
GTEX-139T8-1026-SM-5J2MC 53.9
GTEX-13O3Q-2926-SM-5KM45 53.7
GTEX-13PVQ-3026-SM-5SI93 53.1
GTEX-1128S-2726-SM-5H12C 53.0
GTEX-YFC4-3126-SM-5PNV6 52.7
GTEX-11ZUS-2926-SM-5FQSL 52.1
GTEX-1399T-3026-SM-5KLZC 52.1
GTEX-RNOR-2326-SM-2TF4I 52.0
GTEX-13OW7-3026-SM-5L3GY 51.5
GTEX-NPJ7-2726-SM-2I3FT 50.1
GTEX-13NYS-3126-SM-5KLYV 50.0
GTEX-ZAK1-3026-SM-5S2MJ 49.9
GTEX-13FHP-3026-SM-5IJBS 49.8
GTEX-1445S-3026-SM-5O9BR 48.7
GTEX-ZAJG-3126-SM-5HL9J 48.5
GTEX-RU72-3026-SM-5SI7Y 48.3
GTEX-NPJ8-1526-SM-2D7VU 46.9
GTEX-Y8DK-0826-SM-4TT3T 45.8
GTEX-OXRN-2426-SM-2I5EQ 44.3
GTEX-147GR-3026-SM-5S2ML 43.9
GTEX-11TTK-2926-SM-5PNYP 43.8
GTEX-11NV4-2126-SM-5N9DS 43.7
GTEX-13X6K-2926-SM-5Q5D5 43.7
GTEX-11WQK-3026-SM-5EQL6 43.2
GTEX-11OF3-2926-SM-5HL78 42.6
GTEX-12WSH-3026-SM-5CVNI 41.7
GTEX-13X6J-3026-SM-5Q5CU 41.6
GTEX-T2IS-3026-SM-32QPM 40.7
GTEX-PVOW-2526-SM-2XCF7 38.3
GTEX-PWO3-0926-SM-2I5EY 38.2
GTEX-13IVO-2926-SM-5L3CZ 38.0
GTEX-11O72-2926-SM-5BC4V 33.1
GTEX-UTHO-3026-SM-3GAFB 28.1
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 46.7
Samples: 108

Max RPKM: 68
Min RPKM: 19.5
Std RPKM: 8.3
Median RPKM: 46.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 68.0
GTEX-13OVJ-0011-R10b-SM-5L3HT 66.2
GTEX-13NYS-0011-R10a-SM-5MR4S 62.2
GTEX-13SLW-0011-R10a-SM-5S2UI 61.5
GTEX-13O3O-0011-R10a-SM-5LUA9 60.4
GTEX-131XH-0011-R10a-SM-5EGLJ 59.7
GTEX-13FHO-0011-R10b-SM-5J2MM 59.6
GTEX-13FLV-0011-R10b-SM-5LZZ2 59.4
GTEX-13OW7-0011-R10a-SM-5L3H3 59.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 57.9
GTEX-T5JC-0011-R10A-SM-32PM2 57.5
GTEX-145MG-0011-R10a-SM-5PNWG 57.2
GTEX-12WSA-0011-R10b-SM-5P9ET 56.9
GTEX-TSE9-0011-R10A-SM-3DB7O 56.8
GTEX-13OW6-0011-R10a-SM-5L3HE 56.6
GTEX-13N1W-0011-R10b-SM-5MR4H 56.5
GTEX-13JVG-0011-R10b-SM-5KM2P 55.8
GTEX-X585-0011-R10A-SM-46MUY 55.6
GTEX-XLM4-0011-R10A-SM-4AT5P 55.3
GTEX-13OVL-0011-R10a-SM-5L3GS 54.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 53.6
GTEX-ZDXO-0011-R10a-SM-4WWD8 53.2
GTEX-14ASI-0011-R10b-SM-5S2VZ 52.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 52.8
GTEX-13QIC-0011-R10a-SM-5O9C7 52.7
GTEX-13JUV-0011-R10b-SM-5LZXR 52.4
GTEX-1313W-0011-R10b-SM-5DUXA 52.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 52.1
GTEX-13SLX-0011-R10a-SM-5P9HV 51.9
GTEX-13FLW-0011-R10b-SM-5LZZF 51.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 51.8
GTEX-ZVT3-0011-R10b-SM-57WB6 51.4
GTEX-13QJC-0011-R10a-SM-5SI63 51.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC 51.2
GTEX-13X6K-0011-R10a-SM-5P9JR 50.5
GTEX-12WSM-0011-R10a-SM-5DUWV 50.3
GTEX-Z93S-0011-R10a-SM-4RGNM 49.3
GTEX-YJ89-0011-R10a-SM-4SOK9 49.2
GTEX-1477Z-0011-R10b-SM-5S2RF 48.9
GTEX-145MH-0011-R10b-SM-5PNUK 48.8
GTEX-13O3Q-0011-R10b-SM-5KM39 48.7
GTEX-13FXS-0011-R10a-SM-5J2MA 48.6
GTEX-N7MT-0011-R10A-SM-2I3E1 48.6
GTEX-12WSF-0011-R10a-SM-5LZVH 48.2
GTEX-147F4-0011-R10b-SM-5S2WC 48.1
GTEX-147GR-0011-R10b-SM-5S2UM 47.8
GTEX-11WQC-0011-R10a-SM-57WCT 47.4
GTEX-132Q8-0011-R10b-SM-5DUWZ 47.4
GTEX-ZV68-0011-R10a-SM-51MT7 47.3
GTEX-N7MS-0011-R10A-SM-2HMJK 47.2
GTEX-13S7M-0011-R10b-SM-5PNZB 47.1
GTEX-11H98-0011-R10b-SM-5NQ98 46.5
GTEX-14BIL-0011-R10a-SM-5SI75 46.4
GTEX-13OW8-0011-R10a-SM-5L3H6 46.3
GTEX-12WSD-0011-R10b-SM-5GU79 46.2
GTEX-13CZV-0011-R10b-SM-5LZYD 46.2
GTEX-12WSH-0011-R10a-SM-5LZUS 46.0
GTEX-X4XX-0011-R10B-SM-46MWO 45.7
GTEX-ZF28-0011-R10a-SM-4WWEH 45.7
GTEX-S7SE-0011-R10A-SM-2XCDF 45.5
GTEX-WZTO-0011-R10B-SM-4E3KB 45.4
GTEX-145LU-0011-R10a-SM-5PNWJ 45.3
GTEX-T6MN-0011-R10A-SM-32QP7 44.7
GTEX-14BIN-0011-R10a-SM-5S2UA 44.5
GTEX-WVLH-0011-R10A-SM-3MJFM 44.5
GTEX-YFC4-0011-R10a-SM-4SOK5 44.3
GTEX-NL4W-0011-R10A-SM-2I3DY 44.1
GTEX-12WSE-0011-R10b-SM-5P9JV 43.9
GTEX-12ZZW-0011-R10b-SM-5HL9X 43.9
GTEX-13N2G-0011-R10a-SM-5MR34 43.9
GTEX-13NZA-0011-R10b-SM-5KM54 43.5
GTEX-145LS-0011-R10a-SM-5PNUQ 43.4
GTEX-QMR6-0011-R10A-SM-32PKO 43.4
GTEX-WWYW-0011-R10A-SM-3NB35 43.4
GTEX-XMD1-0011-R10A-SM-4AT4A 43.3
GTEX-ZVZQ-0011-R10b-SM-51MRT 43.1
GTEX-131YS-0011-R10b-SM-5EQ5N 42.9
GTEX-WL46-0011-R10A-SM-3MJFQ 42.9
GTEX-X261-0011-R10B-SM-4E3JT 42.8
GTEX-Y8DK-0011-R10A-SM-4SOK1 41.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 41.7
GTEX-1445S-0011-R10a-SM-5PNWB 41.6
GTEX-ZUA1-0011-R10a-SM-51MT6 41.3
GTEX-14753-0011-R10b-SM-5S2WE 40.8
GTEX-NPJ8-0011-R10A-SM-2YUMO 40.1
GTEX-13FTZ-0011-R10b-SM-5KLZS 39.9
GTEX-P44H-0011-R10A-SM-2XCEK 39.4
GTEX-QDT8-0011-R10A-SM-32PKG 39.4
GTEX-RVPU-0011-R10A-SM-2XCAH 39.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 38.9
GTEX-12WSC-0011-R10a-SM-5GU57 38.8
GTEX-139TS-0011-R10a-SM-5K7TU 38.8
GTEX-13G51-0011-R10b-SM-5LZYF 38.6
GTEX-13NYB-0011-R10a-SM-5KM43 38.6
GTEX-X4EP-0011-R10B-SM-4QASJ 38.1
GTEX-11ZUS-0011-R10b-SM-5BC79 37.8
GTEX-13X6I-0011-R10a-SM-5PNWI 37.4
GTEX-QVUS-0011-R10A-SM-3GIK3 36.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 36.1
GTEX-NL3H-0011-R10A-SM-2I3E9 35.6
GTEX-131XW-0011-R10a-SM-5DUVA 35.5
GTEX-13X6J-0011-R10b-SM-5PNWA 35.2
GTEX-OXRN-0011-R10A-SM-2I5GC 34.5
GTEX-12126-0011-R10b-SM-5BC6T 33.6
GTEX-11WQK-0011-R10a-SM-5BC6R 30.9
GTEX-ZXG5-0011-R10a-SM-57WDD 29.1
GTEX-13IVO-0011-R10a-SM-5LZY3 22.5
GTEX-OXRO-0011-R10A-SM-2I5EH 19.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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