Tissue expression of COL6A1 - Staining in breast

BREAST - Expression summary

Protein expression

RNA expression

HPA:	47.7	TPM
GTEx:	236.5	RPKM
FANTOM5:	545.4	Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Glandular cells:	Not detected
Myoepithelial cells:	Not detected
Adipocytes:	Not available

Antibody staining	Antibody HPA019142	Antibody HPA029401
Glandular cells	Not detected	Not detected
Myoepithelial cells	Not detected	Not detected
Adipocytes	Low

BREAST - HPA RNA-seq

Average TPM	47.7

Female, age 52

Sample 1
TPM: 72.2

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 95.7

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 12.2

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 10.7

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	236.5

GTEx sample id

RPKM

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 236.5

Samples: 214

Max RPKM: 737.5
Min RPKM: 58.6
Std RPKM: 97.6
Median RPKM: 231.8

GTEX-11EQ9-1826-SM-5Q5AJ

737.5

GTEX-WOFL-0826-SM-3MJG1

536.2

GTEX-132NY-0826-SM-5K7Y7

514.0

GTEX-132AR-0826-SM-5EGK6

505.9

GTEX-XYKS-1326-SM-4BRUN

502.0

GTEX-11OF3-1926-SM-59889

483.3

GTEX-T5JW-2026-SM-4DM63

466.3

GTEX-12WSN-1326-SM-5GCNT

444.4

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	545.4

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 545.4

FF:10080-102A8

77 years, female

545.4