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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:1206.8TPM
GTEx:209.8RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Medium
Neuropil:Not detected
 

Antibody staining

Antibody HPA001462

 

Antibody CAB000157

 

Endothelial cells

Low   Not detected  

Glial cells

Not detected   Not detected  

Neuronal cells

Medium   Medium  

Neuropil

Medium   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

1206.8

N/A Male, age 5
Sample 1
TPM: 1437.2
overview Female, age 40
Sample 2
TPM: 933.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 1250.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

209.8

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 144.3
Samples: 114

Max RPKM: 257.7
Min RPKM: 65.8
Std RPKM: 43.4
Median RPKM: 143.3
GTEX-WHSE-3026-SM-3P5ZH 257.7
GTEX-X585-3026-SM-46MWF 248.6
GTEX-11DXY-3226-SM-5GIDE 236.5
GTEX-PVOW-2526-SM-2XCF7 227.9
GTEX-13NYC-2826-SM-5K7WR 220.3
GTEX-T5JC-2426-SM-3NMDB 218.7
GTEX-WZTO-2926-SM-3NM9I 208.1
GTEX-WL46-2926-SM-3LK82 207.0
GTEX-14BMV-3026-SM-5S2PQ 204.5
GTEX-WWYW-3126-SM-3NB39 200.1
GTEX-1313W-3126-SM-5LZUI 199.7
GTEX-117XS-3026-SM-5N9CA 198.5
GTEX-UTHO-3026-SM-3GAFB 198.1
GTEX-WVLH-3026-SM-3MJG9 197.6
GTEX-11ZUS-2926-SM-5FQSL 196.0
GTEX-11NUK-2926-SM-5A5MD 193.2
GTEX-12ZZX-2926-SM-5GCOQ 192.9
GTEX-YFC4-3126-SM-5PNV6 191.3
GTEX-13FHO-3026-SM-5J1O9 190.8
GTEX-TSE9-3026-SM-3DB76 190.2
GTEX-131YS-3126-SM-5KLYT 188.5
GTEX-Y8DK-0826-SM-4TT3T 186.3
GTEX-145MH-3026-SM-5Q5DZ 185.2
GTEX-13FLW-1426-SM-5K7YE 183.4
GTEX-13G51-3026-SM-5IJB8 183.3
GTEX-ZAK1-3026-SM-5S2MJ 182.1
GTEX-T6MN-2626-SM-32PMQ 178.8
GTEX-T2IS-3026-SM-32QPM 176.3
GTEX-XOTO-3026-SM-4B65M 173.6
GTEX-145LS-3126-SM-5Q5BY 173.3
GTEX-Z93S-2926-SM-57WB9 172.2
GTEX-13SLX-3126-SM-5S2Q5 170.5
GTEX-11PRG-2926-SM-5987A 169.3
GTEX-13OVH-3026-SM-5MR4N 168.8
GTEX-13NYS-3126-SM-5KLYV 166.9
GTEX-1192X-3126-SM-5N9BY 165.2
GTEX-1399T-3026-SM-5KLZC 165.0
GTEX-ZYFD-3026-SM-5E44C 164.6
GTEX-13FHP-3026-SM-5IJBS 164.2
GTEX-13FXS-3126-SM-5J2NN 163.1
GTEX-12ZZY-3026-SM-5GCOU 160.6
GTEX-13JVG-3126-SM-5L3FH 159.4
GTEX-111FC-3126-SM-5GZZ2 159.1
GTEX-XLM4-3026-SM-4AT6L 157.7
GTEX-QMR6-1426-SM-32PLA 157.5
GTEX-12WSC-3026-SM-5GCNF 156.8
GTEX-14ASI-3026-SM-5S2PN 156.4
GTEX-11ONC-2926-SM-5P9JM 155.4
GTEX-ZUA1-3026-SM-59HJC 155.1
GTEX-13OW6-3026-SM-5J2MI 153.3
GTEX-12126-1026-SM-5P9JJ 152.4
GTEX-13VXU-2926-SM-5LU5C 151.8
GTEX-13O3O-3126-SM-5KM3H 147.7
GTEX-132Q8-3026-SM-5PNVG 146.9
GTEX-X4XX-3026-SM-3NMB2 146.3
GTEX-RNOR-2326-SM-2TF4I 144.3
GTEX-13OW8-2826-SM-5L3GC 144.1
GTEX-13NYB-3026-SM-5IJD7 142.5
GTEX-11O72-2926-SM-5BC4V 142.2
GTEX-11GSO-2926-SM-5HL73 141.3
GTEX-NPJ8-1526-SM-2D7VU 138.3
GTEX-RU72-3026-SM-5SI7Y 138.1
GTEX-11GS4-3126-SM-5A5LH 135.5
GTEX-12ZZZ-3026-SM-5BC67 135.0
GTEX-13OVJ-2826-SM-5L3GW 134.7
GTEX-13O3Q-2926-SM-5KM45 133.6
GTEX-ZAJG-3126-SM-5HL9J 132.5
GTEX-11DXW-1126-SM-5H12Q 131.8
GTEX-11WQK-3026-SM-5EQL6 131.3
GTEX-12WSH-3026-SM-5CVNI 130.8
GTEX-145MG-3026-SM-5RQJA 129.4
GTEX-QVJO-1426-SM-2S1QY 128.3
GTEX-11OC5-0726-SM-5P9JK 127.4
GTEX-144GL-3026-SM-5Q5CW 126.2
GTEX-N7MT-1126-SM-5SI7V 126.2
GTEX-13PL6-3126-SM-5LUAR 124.9
GTEX-QVUS-2826-SM-3GADB 124.9
GTEX-QDT8-2926-SM-32PKC 124.3
GTEX-1128S-2726-SM-5H12C 123.4
GTEX-145MF-2726-SM-5O995 123.2
GTEX-13PVQ-3026-SM-5SI93 122.5
GTEX-ZVT3-3026-SM-5E43N 119.2
GTEX-13QIC-2926-SM-5J2NF 118.5
GTEX-13X6J-3026-SM-5Q5CU 116.7
GTEX-Y111-2726-SM-4TT3N 116.7
GTEX-Q2AG-2926-SM-2HMJ3 110.9
GTEX-14A5I-2926-SM-5Q5CQ 110.1
GTEX-YJ89-3026-SM-5IFJI 109.4
GTEX-R55F-1326-SM-5S2V4 108.4
GTEX-OXRN-2426-SM-2I5EQ 102.7
GTEX-13X6K-2926-SM-5Q5D5 101.9
GTEX-12WSD-3126-SM-5HL7P 99.1
GTEX-11EI6-3026-SM-5GZZO 95.4
GTEX-NPJ7-2726-SM-2I3FT 95.2
GTEX-11GSP-3226-SM-5986O 94.6
GTEX-13OW7-3026-SM-5L3GY 92.4
GTEX-11EMC-3226-SM-5EGKW 92.3
GTEX-ZE7O-3126-SM-5HL5X 92.1
GTEX-13JUV-2926-SM-5LZX7 89.5
GTEX-13S7M-3126-SM-5RQJQ 89.2
GTEX-ZZPT-3026-SM-5GZXH 87.0
GTEX-12ZZW-2926-SM-5LZUP 86.1
GTEX-139T8-1026-SM-5J2MC 83.7
GTEX-131XW-3126-SM-5LZUC 83.5
GTEX-13IVO-2926-SM-5L3CZ 83.3
GTEX-11NV4-2126-SM-5N9DS 82.9
GTEX-11TTK-2926-SM-5PNYP 80.7
GTEX-147GR-3026-SM-5S2ML 76.2
GTEX-11OF3-2926-SM-5HL78 73.9
GTEX-1445S-3026-SM-5O9BR 71.5
GTEX-144FL-3026-SM-5O99C 70.3
GTEX-1117F-3226-SM-5N9CT 69.7
GTEX-12WSA-2926-SM-5EQ4D 66.0
GTEX-PWO3-0926-SM-2I5EY 65.8
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 278.9
Samples: 108

Max RPKM: 477.9
Min RPKM: 48.4
Std RPKM: 107.1
Median RPKM: 292
GTEX-WL46-0011-R10A-SM-3MJFQ 477.9
GTEX-X585-0011-R10A-SM-46MUY 473.8
GTEX-WVLH-0011-R10A-SM-3MJFM 470.1
GTEX-12WSE-0011-R10b-SM-5P9JV 463.7
GTEX-NL3H-0011-R10A-SM-2I3E9 435.8
GTEX-145MH-0011-R10b-SM-5PNUK 435.5
GTEX-WZTO-0011-R10B-SM-4E3KB 433.8
GTEX-S7SE-0011-R10A-SM-2XCDF 418.9
GTEX-T6MN-0011-R10A-SM-32QP7 418.8
GTEX-T5JC-0011-R10A-SM-32PM2 418.5
GTEX-Q2AG-0011-R10A-SM-2HMLA 418.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 417.3
GTEX-131YS-0011-R10b-SM-5EQ5N 414.9
GTEX-145MG-0011-R10a-SM-5PNWG 412.3
GTEX-QDT8-0011-R10A-SM-32PKG 406.7
GTEX-1313W-0011-R10b-SM-5DUXA 405.9
GTEX-13FLW-0011-R10b-SM-5LZZF 394.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 393.7
GTEX-13O3Q-0011-R10b-SM-5KM39 391.8
GTEX-WWYW-0011-R10A-SM-3NB35 390.6
GTEX-Y8DK-0011-R10A-SM-4SOK1 390.5
GTEX-13X6K-0011-R10a-SM-5P9JR 384.2
GTEX-131XH-0011-R10a-SM-5EGLJ 383.5
GTEX-13RTJ-0011-R10b-SM-5O9CW 382.9
GTEX-YFC4-0011-R10a-SM-4SOK5 381.2
GTEX-14ASI-0011-R10b-SM-5S2VZ 360.9
GTEX-13FHO-0011-R10b-SM-5J2MM 360.6
GTEX-13S7M-0011-R10b-SM-5PNZB 358.5
GTEX-13X6J-0011-R10b-SM-5PNWA 351.9
GTEX-XLM4-0011-R10A-SM-4AT5P 349.4
GTEX-12WSF-0011-R10a-SM-5LZVH 349.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 348.0
GTEX-13N1W-0011-R10b-SM-5MR4H 337.2
GTEX-13CZV-0011-R10b-SM-5LZYD 336.2
GTEX-X4XX-0011-R10B-SM-46MWO 333.3
GTEX-12WSM-0011-R10a-SM-5DUWV 332.9
GTEX-14BIN-0011-R10a-SM-5S2UA 332.5
GTEX-12WSC-0011-R10a-SM-5GU57 331.5
GTEX-145LS-0011-R10a-SM-5PNUQ 330.1
GTEX-13QIC-0011-R10a-SM-5O9C7 324.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 320.4
GTEX-13X6I-0011-R10a-SM-5PNWI 318.7
GTEX-N7MS-0011-R10A-SM-2HMJK 315.3
GTEX-11H98-0011-R10b-SM-5NQ98 315.2
GTEX-QVUS-0011-R10A-SM-3GIK3 310.1
GTEX-NPJ7-0011-R10A-SM-2I3E5 309.7
GTEX-X4EP-0011-R10B-SM-4QASJ 307.6
GTEX-ZF28-0011-R10a-SM-4WWEH 304.6
GTEX-QMR6-0011-R10A-SM-32PKO 304.0
GTEX-12ZZY-0011-R10b-SM-5HL7W 302.4
GTEX-13OVL-0011-R10a-SM-5L3GS 300.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 299.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC 298.4
GTEX-13NYB-0011-R10a-SM-5KM43 294.9
GTEX-13SLX-0011-R10a-SM-5P9HV 289.2
GTEX-N7MT-0011-R10A-SM-2I3E1 287.2
GTEX-12WSH-0011-R10a-SM-5LZUS 277.4
GTEX-13OW7-0011-R10a-SM-5L3H3 271.8
GTEX-13G51-0011-R10b-SM-5LZYF 269.9
GTEX-YJ89-0011-R10a-SM-4SOK9 266.8
GTEX-Z93S-0011-R10a-SM-4RGNM 266.8
GTEX-13FXS-0011-R10a-SM-5J2MA 265.2
GTEX-147GR-0011-R10b-SM-5S2UM 262.3
GTEX-XMD1-0011-R10A-SM-4AT4A 258.6
GTEX-ZDXO-0011-R10a-SM-4WWD8 258.6
GTEX-14BIL-0011-R10a-SM-5SI75 257.2
GTEX-ZAB4-0011-R10a-SM-4SOKH 251.9
GTEX-12126-0011-R10b-SM-5BC6T 251.7
GTEX-13NYS-0011-R10a-SM-5MR4S 250.9
GTEX-13O3O-0011-R10a-SM-5LUA9 244.7
GTEX-ZE7O-0011-R10a-SM-57WAZ 243.9
GTEX-ZUA1-0011-R10a-SM-51MT6 237.5
GTEX-13QJC-0011-R10a-SM-5SI63 236.9
GTEX-145LU-0011-R10a-SM-5PNWJ 236.8
GTEX-P44H-0011-R10A-SM-2XCEK 233.3
GTEX-13OW6-0011-R10a-SM-5L3HE 230.4
GTEX-13FLV-0011-R10b-SM-5LZZ2 221.4
GTEX-OXRN-0011-R10A-SM-2I5GC 213.3
GTEX-11ZUS-0011-R10b-SM-5BC79 211.7
GTEX-TSE9-0011-R10A-SM-3DB7O 208.8
GTEX-147F4-0011-R10b-SM-5S2WC 201.8
GTEX-13OW8-0011-R10a-SM-5L3H6 199.1
GTEX-13N2G-0011-R10a-SM-5MR34 194.2
GTEX-ZVT3-0011-R10b-SM-57WB6 185.3
GTEX-11WQK-0011-R10a-SM-5BC6R 180.0
GTEX-13JUV-0011-R10b-SM-5LZXR 180.0
GTEX-13JVG-0011-R10b-SM-5KM2P 178.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 171.6
GTEX-RVPU-0011-R10A-SM-2XCAH 168.9
GTEX-12WSD-0011-R10b-SM-5GU79 156.9
GTEX-13OVJ-0011-R10b-SM-5L3HT 156.6
GTEX-X261-0011-R10B-SM-4E3JT 152.3
GTEX-ZXG5-0011-R10a-SM-57WDD 143.9
GTEX-13SLW-0011-R10a-SM-5S2UI 136.2
GTEX-13NZA-0011-R10b-SM-5KM54 126.4
GTEX-11GSP-0011-R10a-SM-5NQ7J 125.4
GTEX-139TS-0011-R10a-SM-5K7TU 123.8
GTEX-NL4W-0011-R10A-SM-2I3DY 119.7
GTEX-12ZZW-0011-R10b-SM-5HL9X 115.6
GTEX-12WSA-0011-R10b-SM-5P9ET 114.0
GTEX-11WQC-0011-R10a-SM-57WCT 112.9
GTEX-OXRO-0011-R10A-SM-2I5EH 105.2
GTEX-13IVO-0011-R10a-SM-5LZY3 93.6
GTEX-14753-0011-R10b-SM-5S2WE 77.7
GTEX-1445S-0011-R10a-SM-5PNWB 76.5
GTEX-1477Z-0011-R10b-SM-5S2RF 64.4
GTEX-ZV68-0011-R10a-SM-51MT7 59.2
GTEX-131XW-0011-R10a-SM-5DUVA 48.4
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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