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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:16.0TPM
GTEx:8.9RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Not detected
 

Antibody staining

Antibody HPA007845

 

Antibody HPA026823

 

Antibody CAB015170

 

Endothelial cells

Not detected   Not detected   Not detected  

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Medium   Not detected   Medium  

Neuropil

Not detected   Not detected   Not detected  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

16.0

N/A Male, age 5
Sample 1
TPM: 15.6
overview Female, age 40
Sample 2
TPM: 20.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 11.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

8.9

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 8.4
Samples: 114

Max RPKM: 15.1
Min RPKM: 2.2
Std RPKM: 2.7
Median RPKM: 8.1
GTEX-PVOW-2526-SM-2XCF7 15.1
GTEX-145MH-3026-SM-5Q5DZ 14.2
GTEX-11DXW-1126-SM-5H12Q 13.7
GTEX-X4XX-3026-SM-3NMB2 13.6
GTEX-RU72-3026-SM-5SI7Y 13.4
GTEX-11PRG-2926-SM-5987A 13.1
GTEX-12ZZX-2926-SM-5GCOQ 12.9
GTEX-T5JC-2426-SM-3NMDB 12.9
GTEX-UTHO-3026-SM-3GAFB 12.4
GTEX-WWYW-3126-SM-3NB39 12.2
GTEX-14A5I-2926-SM-5Q5CQ 12.1
GTEX-14BMV-3026-SM-5S2PQ 12.0
GTEX-ZAK1-3026-SM-5S2MJ 12.0
GTEX-13SLX-3126-SM-5S2Q5 11.8
GTEX-XLM4-3026-SM-4AT6L 11.6
GTEX-11NUK-2926-SM-5A5MD 11.5
GTEX-ZVT3-3026-SM-5E43N 11.5
GTEX-13X6J-3026-SM-5Q5CU 11.3
GTEX-Y8DK-0826-SM-4TT3T 11.3
GTEX-117XS-3026-SM-5N9CA 11.1
GTEX-1313W-3126-SM-5LZUI 11.0
GTEX-132Q8-3026-SM-5PNVG 10.9
GTEX-QVJO-1426-SM-2S1QY 10.9
GTEX-13NYC-2826-SM-5K7WR 10.8
GTEX-13PL6-3126-SM-5LUAR 10.8
GTEX-WZTO-2926-SM-3NM9I 10.8
GTEX-145MG-3026-SM-5RQJA 10.7
GTEX-11EI6-3026-SM-5GZZO 10.6
GTEX-Q2AG-2926-SM-2HMJ3 10.6
GTEX-WVLH-3026-SM-3MJG9 10.6
GTEX-ZUA1-3026-SM-59HJC 10.6
GTEX-11ZUS-2926-SM-5FQSL 10.4
GTEX-12126-1026-SM-5P9JJ 10.4
GTEX-X585-3026-SM-46MWF 10.4
GTEX-144GL-3026-SM-5Q5CW 10.3
GTEX-13FXS-3126-SM-5J2NN 10.2
GTEX-13OW6-3026-SM-5J2MI 10.2
GTEX-T2IS-3026-SM-32QPM 10.0
GTEX-12ZZW-2926-SM-5LZUP 9.9
GTEX-1192X-3126-SM-5N9BY 9.8
GTEX-R55F-1326-SM-5S2V4 9.8
GTEX-13O3O-3126-SM-5KM3H 9.7
GTEX-YJ89-3026-SM-5IFJI 9.7
GTEX-11NV4-2126-SM-5N9DS 9.6
GTEX-T6MN-2626-SM-32PMQ 9.2
GTEX-11OC5-0726-SM-5P9JK 9.1
GTEX-111FC-3126-SM-5GZZ2 8.9
GTEX-RNOR-2326-SM-2TF4I 8.7
GTEX-WHSE-3026-SM-3P5ZH 8.6
GTEX-1128S-2726-SM-5H12C 8.5
GTEX-131XW-3126-SM-5LZUC 8.5
GTEX-11GS4-3126-SM-5A5LH 8.3
GTEX-14ASI-3026-SM-5S2PN 8.2
GTEX-Z93S-2926-SM-57WB9 8.2
GTEX-131YS-3126-SM-5KLYT 8.1
GTEX-13OW8-2826-SM-5L3GC 8.1
GTEX-QVUS-2826-SM-3GADB 8.1
GTEX-WL46-2926-SM-3LK82 8.1
GTEX-11GSO-2926-SM-5HL73 8.0
GTEX-13VXU-2926-SM-5LU5C 8.0
GTEX-OXRN-2426-SM-2I5EQ 8.0
GTEX-11ONC-2926-SM-5P9JM 7.9
GTEX-13O3Q-2926-SM-5KM45 7.9
GTEX-ZAJG-3126-SM-5HL9J 7.9
GTEX-13FLW-1426-SM-5K7YE 7.8
GTEX-13FHP-3026-SM-5IJBS 7.5
GTEX-147GR-3026-SM-5S2ML 7.5
GTEX-ZYFD-3026-SM-5E44C 7.5
GTEX-11DXY-3226-SM-5GIDE 7.4
GTEX-13NYS-3126-SM-5KLYV 7.4
GTEX-YFC4-3126-SM-5PNV6 7.3
GTEX-12WSH-3026-SM-5CVNI 7.1
GTEX-12ZZZ-3026-SM-5BC67 7.1
GTEX-13NYB-3026-SM-5IJD7 7.1
GTEX-ZE7O-3126-SM-5HL5X 7.1
GTEX-NPJ7-2726-SM-2I3FT 7.0
GTEX-139T8-1026-SM-5J2MC 6.9
GTEX-145LS-3126-SM-5Q5BY 6.9
GTEX-145MF-2726-SM-5O995 6.9
GTEX-12WSC-3026-SM-5GCNF 6.8
GTEX-13S7M-3126-SM-5RQJQ 6.8
GTEX-ZZPT-3026-SM-5GZXH 6.8
GTEX-12WSD-3126-SM-5HL7P 6.6
GTEX-13JUV-2926-SM-5LZX7 6.6
GTEX-13QIC-2926-SM-5J2NF 6.6
GTEX-XOTO-3026-SM-4B65M 6.6
GTEX-13X6K-2926-SM-5Q5D5 6.3
GTEX-PWO3-0926-SM-2I5EY 6.3
GTEX-Y111-2726-SM-4TT3N 6.3
GTEX-1117F-3226-SM-5N9CT 6.2
GTEX-13FHO-3026-SM-5J1O9 6.2
GTEX-12ZZY-3026-SM-5GCOU 6.1
GTEX-TSE9-3026-SM-3DB76 6.0
GTEX-11GSP-3226-SM-5986O 5.9
GTEX-13JVG-3126-SM-5L3FH 5.8
GTEX-QDT8-2926-SM-32PKC 5.8
GTEX-QMR6-1426-SM-32PLA 5.8
GTEX-1399T-3026-SM-5KLZC 5.6
GTEX-13OVH-3026-SM-5MR4N 5.6
GTEX-13PVQ-3026-SM-5SI93 5.4
GTEX-NPJ8-1526-SM-2D7VU 5.4
GTEX-13OVJ-2826-SM-5L3GW 5.2
GTEX-11WQK-3026-SM-5EQL6 4.9
GTEX-11EMC-3226-SM-5EGKW 4.5
GTEX-13G51-3026-SM-5IJB8 4.3
GTEX-13IVO-2926-SM-5L3CZ 4.3
GTEX-13OW7-3026-SM-5L3GY 4.3
GTEX-11O72-2926-SM-5BC4V 4.2
GTEX-N7MT-1126-SM-5SI7V 4.1
GTEX-11TTK-2926-SM-5PNYP 3.8
GTEX-144FL-3026-SM-5O99C 3.8
GTEX-12WSA-2926-SM-5EQ4D 3.4
GTEX-11OF3-2926-SM-5HL78 3.3
GTEX-1445S-3026-SM-5O9BR 2.2
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 9.4
Samples: 108

Max RPKM: 18.1
Min RPKM: 2
Std RPKM: 3.8
Median RPKM: 9.7
GTEX-1313W-0011-R10b-SM-5DUXA 18.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 16.8
GTEX-ZVZQ-0011-R10b-SM-51MRT 16.7
GTEX-13X6J-0011-R10b-SM-5PNWA 16.6
GTEX-147GR-0011-R10b-SM-5S2UM 16.4
GTEX-X4XX-0011-R10B-SM-46MWO 16.2
GTEX-145MG-0011-R10a-SM-5PNWG 16.0
GTEX-NL3H-0011-R10A-SM-2I3E9 15.5
GTEX-ZVT3-0011-R10b-SM-57WB6 14.9
GTEX-12ZZX-0011-R10b-SM-5DUWK 14.7
GTEX-145MH-0011-R10b-SM-5PNUK 14.4
GTEX-WZTO-0011-R10B-SM-4E3KB 14.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 14.2
GTEX-131XH-0011-R10a-SM-5EGLJ 13.9
GTEX-13SLX-0011-R10a-SM-5P9HV 13.9
GTEX-Q2AG-0011-R10A-SM-2HMLA 13.3
GTEX-XLM4-0011-R10A-SM-4AT5P 13.2
GTEX-ZF28-0011-R10a-SM-4WWEH 13.2
GTEX-T5JC-0011-R10A-SM-32PM2 13.1
GTEX-14BIN-0011-R10a-SM-5S2UA 13.0
GTEX-12WSF-0011-R10a-SM-5LZVH 12.8
GTEX-132Q8-0011-R10b-SM-5DUWZ 12.7
GTEX-13OW6-0011-R10a-SM-5L3HE 12.6
GTEX-YJ89-0011-R10a-SM-4SOK9 12.6
GTEX-WWYW-0011-R10A-SM-3NB35 12.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 12.3
GTEX-X585-0011-R10A-SM-46MUY 12.3
GTEX-13JUV-0011-R10b-SM-5LZXR 12.0
GTEX-13O3Q-0011-R10b-SM-5KM39 11.9
GTEX-S7SE-0011-R10A-SM-2XCDF 11.7
GTEX-13X6I-0011-R10a-SM-5PNWI 11.6
GTEX-13FXS-0011-R10a-SM-5J2MA 11.5
GTEX-12126-0011-R10b-SM-5BC6T 11.4
GTEX-13CZV-0011-R10b-SM-5LZYD 11.4
GTEX-13O3O-0011-R10a-SM-5LUA9 11.4
GTEX-12WSM-0011-R10a-SM-5DUWV 11.3
GTEX-WL46-0011-R10A-SM-3MJFQ 11.2
GTEX-13S7M-0011-R10b-SM-5PNZB 10.9
GTEX-T6MN-0011-R10A-SM-32QP7 10.9
GTEX-13NYS-0011-R10a-SM-5MR4S 10.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 10.7
GTEX-ZDXO-0011-R10a-SM-4WWD8 10.7
GTEX-13QIC-0011-R10a-SM-5O9C7 10.5
GTEX-147F4-0011-R10b-SM-5S2WC 10.5
GTEX-13X6K-0011-R10a-SM-5P9JR 10.4
GTEX-12WSH-0011-R10a-SM-5LZUS 10.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC 10.3
GTEX-13OW7-0011-R10a-SM-5L3H3 10.3
GTEX-WVLH-0011-R10A-SM-3MJFM 10.3
GTEX-139TS-0011-R10a-SM-5K7TU 10.2
GTEX-OXRN-0011-R10A-SM-2I5GC 10.2
GTEX-ZUA1-0011-R10a-SM-51MT6 10.2
GTEX-13N1W-0011-R10b-SM-5MR4H 9.9
GTEX-13RTJ-0011-R10b-SM-5O9CW 9.8
GTEX-12WSE-0011-R10b-SM-5P9JV 9.7
GTEX-131YS-0011-R10b-SM-5EQ5N 9.6
GTEX-13FLV-0011-R10b-SM-5LZZ2 9.6
GTEX-11WQC-0011-R10a-SM-57WCT 9.5
GTEX-Z93S-0011-R10a-SM-4RGNM 9.3
GTEX-13G51-0011-R10b-SM-5LZYF 9.2
GTEX-N7MS-0011-R10A-SM-2HMJK 9.0
GTEX-NPJ7-0011-R10A-SM-2I3E5 8.9
GTEX-13OW8-0011-R10a-SM-5L3H6 8.7
GTEX-145LS-0011-R10a-SM-5PNUQ 8.6
GTEX-12WSC-0011-R10a-SM-5GU57 8.5
GTEX-11H98-0011-R10b-SM-5NQ98 8.1
GTEX-QVUS-0011-R10A-SM-3GIK3 8.1
GTEX-YFC4-0011-R10a-SM-4SOK5 7.9
GTEX-13QJC-0011-R10a-SM-5SI63 7.7
GTEX-NL4W-0011-R10A-SM-2I3DY 7.6
GTEX-13OVL-0011-R10a-SM-5L3GS 7.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 7.5
GTEX-13FLW-0011-R10b-SM-5LZZF 7.4
GTEX-13FHO-0011-R10b-SM-5J2MM 7.3
GTEX-RVPU-0011-R10A-SM-2XCAH 7.3
GTEX-13NYB-0011-R10a-SM-5KM43 7.1
GTEX-11ZUS-0011-R10b-SM-5BC79 7.0
GTEX-12ZZW-0011-R10b-SM-5HL9X 7.0
GTEX-14BIL-0011-R10a-SM-5SI75 6.9
GTEX-QMR6-0011-R10A-SM-32PKO 6.8
GTEX-ZAB4-0011-R10a-SM-4SOKH 6.7
GTEX-P44H-0011-R10A-SM-2XCEK 6.5
GTEX-X4EP-0011-R10B-SM-4QASJ 6.5
GTEX-N7MT-0011-R10A-SM-2I3E1 6.3
GTEX-13JVG-0011-R10b-SM-5KM2P 6.1
GTEX-13FTZ-0011-R10b-SM-5KLZS 6.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 5.7
GTEX-13N2G-0011-R10a-SM-5MR34 5.6
GTEX-TSE9-0011-R10A-SM-3DB7O 5.6
GTEX-ZXG5-0011-R10a-SM-57WDD 5.6
GTEX-13SLW-0011-R10a-SM-5S2UI 5.2
GTEX-QDT8-0011-R10A-SM-32PKG 5.0
GTEX-XMD1-0011-R10A-SM-4AT4A 4.5
GTEX-12WSD-0011-R10b-SM-5GU79 4.4
GTEX-11WQK-0011-R10a-SM-5BC6R 4.2
GTEX-13NZA-0011-R10b-SM-5KM54 4.1
GTEX-145LU-0011-R10a-SM-5PNWJ 4.1
GTEX-13OVJ-0011-R10b-SM-5L3HT 3.5
GTEX-13IVO-0011-R10a-SM-5LZY3 3.4
GTEX-1477Z-0011-R10b-SM-5S2RF 3.4
GTEX-14753-0011-R10b-SM-5S2WE 3.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 3.3
GTEX-X261-0011-R10B-SM-4E3JT 3.1
GTEX-12WSA-0011-R10b-SM-5P9ET 3.0
GTEX-ZV68-0011-R10a-SM-51MT7 3.0
GTEX-OXRO-0011-R10A-SM-2I5EH 2.8
GTEX-131XW-0011-R10a-SM-5DUVA 2.6
GTEX-1445S-0011-R10a-SM-5PNWB 2.0
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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