Tissue expression of SETDB1 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	11.5	TPM
GTEx:	7.6	RPKM
FANTOM5:	19.5	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA018142
Adipocytes	Not detected
Fibroblasts	Not detected
Peripheral nerve	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA018142
Adipocytes	Not detected
Fibroblasts	Not detected
Peripheral nerve	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	11.5

Female, age 80

Sample 1
TPM: 11.8

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 8.5

Female, age 57

Sample 3
TPM: 7.7

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 16.4

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 12.9

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	7.6

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 8.5

Samples: 350

Max RPKM: 12.5
Min RPKM: 4.5
Std RPKM: 1.3
Median RPKM: 8.5

GTEX-RVPU-2326-SM-2TF6R

12.5

GTEX-12WSB-0226-SM-5GCOR

12.4

GTEX-148VI-1726-SM-5S2W9

12.1

GTEX-P4QT-0226-SM-3LK68

11.6

GTEX-13S7M-0226-SM-5S2UG

11.4

GTEX-11LCK-1126-SM-5A5KC

11.2

GTEX-139TU-0226-SM-5J1NM

11.2

GTEX-13O21-1526-SM-5K7W4

11.2

Show all

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 6.2

Samples: 227

Max RPKM: 10.1
Min RPKM: 2.7
Std RPKM: 1.5
Median RPKM: 6.1

GTEX-13X6I-1526-SM-5SIAC

10.1

GTEX-14A6H-1026-SM-5SIAZ

10.0

GTEX-11DXY-0326-SM-5H12F

9.9

GTEX-UPK5-1826-SM-3GAEB

9.9

GTEX-13N11-1826-SM-5IJDS

9.4

GTEX-13S7M-0826-SM-5QGQX

9.4

GTEX-14DAQ-2526-SM-5RQIO

9.4

GTEX-12ZZW-2326-SM-5DUW2

9.3

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	19.5

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 19.5

FF:10010-101C1

65,65,76 years, mixed

19.5