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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:33.7TPM
GTEx:19.2RPKM
FANTOM5:27.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:High
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA046974

  

Adipocytes

 Medium  

Chondrocytes

 High  

Fibroblasts

 Medium  

Peripheral nerve

 Medium  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Fibroblasts:High
 
 
 

Antibody staining

Antibody HPA046974

  

Adipocytes

 High  

Fibroblasts

 High  
    
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

33.7
N/A Female, age 80
Sample 1
TPM: 46.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 24.3
N/A Female, age 57
Sample 3
TPM: 30.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 34.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 33.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

19.2

GTEx sample id

RPKM
18.119.922.013.127.5051015202530354045
 
18.119.922.013.127.5051015202530354045

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 20.1
Samples: 350

Max RPKM: 46.4
Min RPKM: 8.7
Std RPKM: 3.3
Median RPKM: 20
GTEX-Y5V6-2526-SM-5IFJV 46.4
GTEX-13FHP-0226-SM-5K7WD 32.4
GTEX-13G51-2626-SM-5LZYW 31.0
GTEX-ZP4G-2326-SM-57WEM 27.5
GTEX-ZXES-2026-SM-5NQ6R 27.4
GTEX-YB5E-2126-SM-5IFI7 27.3
GTEX-139YR-2426-SM-5J1OB 26.9
GTEX-NPJ8-0226-SM-48TBN 26.5
Show all
15.617.519.89.226.1024681012141618202224262830
 
15.617.519.89.226.1024681012141618202224262830

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 17.8
Samples: 227

Max RPKM: 31
Min RPKM: 9.2
Std RPKM: 3.6
Median RPKM: 17.5
GTEX-ZF2S-1526-SM-5S2OO 31.0
GTEX-ZYFC-1826-SM-5GZZA 29.6
GTEX-13X6H-1726-SM-5Q5EH 29.4
GTEX-12ZZX-1726-SM-5BC63 26.7
GTEX-ZPU1-1226-SM-5HL71 26.1
GTEX-1313W-1626-SM-5J1OE 25.9
GTEX-1399S-1426-SM-5PNYQ 25.8
GTEX-XMK1-0926-SM-4B66X 25.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

27.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 27.7
FF:10010-101C1 65,65,76 years, mixed 27.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.