We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
FLG
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:8.8TPM
GTEx:7.5RPKM
FANTOM5:22.4Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Medium
 

Antibody staining

Antibody HPA030188

 

Antibody HPA030189

 

Antibody CAB002210

 

Squamous epithelial cells

Medium   Medium   Not detected  
     
     
     

ESOPHAGUS - HPA RNA-seq

Average TPM

8.8

overview Female, age 70
Sample 1
TPM: 2.4
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 5.6
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 18.4
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

7.5

GTEx sample id

RPKM

 

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 7.5
Samples: 286

Max RPKM: 132.2
Min RPKM: 0
Std RPKM: 15
Median RPKM: 1.6
GTEX-ZG7Y-1126-SM-4WWEZ 132.2
GTEX-11P7K-1326-SM-5BC5G 89.2
GTEX-1399R-0826-SM-5IJEL 80.5
GTEX-13FTX-0526-SM-5IFGS 67.4
GTEX-11DXZ-1226-SM-5H11L 63.0
GTEX-14AS3-0626-SM-5QGQD 52.9
GTEX-12BJ1-1626-SM-5HL8Y 51.4
GTEX-ZTSS-0626-SM-59867 51.4
GTEX-139YR-1726-SM-5IFFK 49.9
GTEX-VUSG-1226-SM-4KKZF 49.0
GTEX-132AR-2226-SM-5J2NT 46.5
GTEX-Y3IK-1126-SM-51MSV 42.2
GTEX-1399S-1326-SM-5P9GH 36.9
GTEX-R53T-1126-SM-48FD4 36.3
GTEX-RM2N-0726-SM-48FD5 33.2
GTEX-OIZG-1026-SM-3LK5X 32.7
GTEX-S4Q7-0626-SM-4AD5M 32.1
GTEX-XBEW-1326-SM-4AT63 31.8
GTEX-P4QT-0626-SM-3NMCP 31.2
GTEX-12C56-1226-SM-5FQSU 30.7
GTEX-117YX-1626-SM-5GZZG 28.3
GTEX-QV44-1126-SM-4R1KO 28.3
GTEX-131XE-1426-SM-5HL7V 28.0
GTEX-PWCY-0726-SM-48TCS 25.7
GTEX-ZVP2-1326-SM-57WCE 25.6
GTEX-111CU-0726-SM-5GZYD 24.2
GTEX-OIZH-0626-SM-3NB1L 22.8
GTEX-XK95-1026-SM-4GIDV 21.6
GTEX-UPK5-1226-SM-4IHL8 21.1
GTEX-UJHI-0826-SM-4IHLM 21.0
GTEX-RWS6-0826-SM-47JXF 19.2
GTEX-NFK9-1126-SM-3LK78 18.0
GTEX-T6MO-0526-SM-4DM6R 17.5
GTEX-XXEK-0326-SM-4BRVV 17.5
GTEX-ZQUD-0426-SM-57WFR 17.4
GTEX-131XF-0826-SM-5GICG 17.2
GTEX-131XG-1026-SM-5GCMX 17.2
GTEX-XQ8I-1526-SM-4BOOH 17.2
GTEX-11P82-0526-SM-5986P 16.2
GTEX-ZVT2-1326-SM-5E45H 16.1
GTEX-YB5E-0926-SM-4WWDQ 15.9
GTEX-Q2AI-0626-SM-48TZU 15.8
GTEX-SE5C-1226-SM-4BRWV 15.1
GTEX-S3XE-0926-SM-4AD4S 14.4
GTEX-ZF2S-1226-SM-4WWAX 14.0
GTEX-13PVR-1826-SM-5Q5CC 13.6
GTEX-14DAQ-1426-SM-5RQJD 13.6
GTEX-ZPCL-1426-SM-57WEC 13.6
GTEX-ZTPG-1626-SM-5DUX2 13.4
GTEX-13QJ3-1726-SM-5RQK9 13.2
GTEX-U4B1-0826-SM-4DXTW 13.2
GTEX-1122O-1726-SM-5GICM 12.4
GTEX-ZLV1-0526-SM-4WWD4 12.1
GTEX-XBED-1026-SM-48TCB 11.5
GTEX-O5YV-1026-SM-3LK72 10.6
GTEX-131YS-1426-SM-5IJF7 10.5
GTEX-P4PQ-0626-SM-3NMCU 10.1
GTEX-TML8-1526-SM-4DXUX 10.1
GTEX-Q2AH-0826-SM-48TZN 10.0
GTEX-ZT9W-1326-SM-51MTB 9.8
GTEX-OXRP-0926-SM-48TC1 9.5
GTEX-146FH-1726-SM-5QGQ2 9.3
GTEX-V1D1-1026-SM-4JBHE 8.5
GTEX-PLZ6-0526-SM-3P61C 8.4
GTEX-ZC5H-1326-SM-5HL7E 8.1
GTEX-OXRN-1726-SM-3NM9B 8.0
GTEX-X4XY-1726-SM-46MVO 7.8
GTEX-XV7Q-1126-SM-4BRVS 7.8
GTEX-11DXY-1426-SM-5N9CN 7.6
GTEX-VJYA-0726-SM-4KL1T 7.5
GTEX-ZYWO-1026-SM-5E45U 7.5
GTEX-ZF29-1326-SM-4WWB6 7.3
GTEX-1399Q-1126-SM-5P9JA 7.2
GTEX-XYKS-1526-SM-4BRUP 7.2
GTEX-12ZZY-1426-SM-5N9EI 6.9
GTEX-13FTW-1626-SM-5KM4N 6.6
GTEX-P4PP-0626-SM-3NM9X 6.6
GTEX-W5WG-1626-SM-4LMKG 6.6
GTEX-S95S-0426-SM-4B64I 6.5
GTEX-WEY5-0926-SM-4LMI4 6.3
GTEX-X585-1226-SM-46MW7 6.3
GTEX-14E1K-1226-SM-5S2PD 6.2
GTEX-13RTK-0526-SM-5S2QF 6.0
GTEX-PWN1-0626-SM-48TDT 6.0
GTEX-QDVJ-0726-SM-48U1W 5.9
GTEX-144GM-1426-SM-5LU31 5.4
GTEX-11ONC-1526-SM-5GU6S 5.3
GTEX-T8EM-0526-SM-4DM64 5.2
GTEX-OOBK-0625-SM-3LK5P 5.1
GTEX-133LE-0626-SM-5IFFJ 5.0
GTEX-ZY6K-0626-SM-59HJL 5.0
GTEX-WQUQ-1626-SM-4OOSH 4.8
GTEX-QLQ7-0926-SM-447BC 4.7
GTEX-U8XE-1726-SM-4E3IF 4.7
GTEX-PLZ5-0926-SM-3TW8L 4.6
GTEX-132QS-1426-SM-5P9GE 4.4
GTEX-R55G-1026-SM-48FDI 4.4
GTEX-WVLH-1426-SM-4MVNX 4.4
GTEX-ZYT6-1126-SM-5GZYR 4.4
GTEX-RU1J-0326-SM-46MUM 4.3
GTEX-13OVG-0626-SM-5IFEP 4.2
GTEX-XUJ4-1026-SM-4BOPB 4.2
GTEX-11TUW-1326-SM-5EQKV 4.1
GTEX-14H4A-1626-SM-5SI69 3.9
GTEX-14E6E-0726-SM-5S2R3 3.6
GTEX-U3ZN-1726-SM-4DXUQ 3.4
GTEX-11EQ9-0726-SM-5A5K2 3.3
GTEX-ZYFG-1126-SM-5GICY 3.3
GTEX-11TT1-0526-SM-5P9JO 3.2
GTEX-13S86-0826-SM-5SI6J 3.1
GTEX-Y8E4-1726-SM-5LU9G 3.1
GTEX-13OVI-2626-SM-5KM4T 3.0
GTEX-RN64-1026-SM-48FDX 3.0
GTEX-T2IS-0826-SM-4DM6L 2.9
GTEX-X4LF-0626-SM-4QASB 2.7
GTEX-R55C-0826-SM-48FCL 2.6
GTEX-U3ZM-0526-SM-4DXTB 2.5
GTEX-11VI4-0526-SM-5EQ48 2.4
GTEX-139T6-0626-SM-5IFF9 2.4
GTEX-147F3-0826-SM-5NQA7 2.3
GTEX-RVPV-0526-SM-47JYL 2.3
GTEX-13FH7-0526-SM-5IJF8 2.1
GTEX-14BMU-0926-SM-5S2QB 2.1
GTEX-11P81-0826-SM-5P9GR 2.0
GTEX-11XUK-0826-SM-5GU6P 2.0
GTEX-X3Y1-1326-SM-4PQZB 1.9
GTEX-ZT9X-0526-SM-5GCOP 1.9
GTEX-11DXX-1126-SM-5GZZK 1.8
GTEX-11NSD-1126-SM-5N9BQ 1.8
GTEX-1211K-0926-SM-5FQTL 1.8
GTEX-REY6-1326-SM-48FDO 1.8
GTEX-SNOS-0626-SM-4DM5F 1.8
GTEX-UPIC-1026-SM-4IHLT 1.8
GTEX-13OW8-2326-SM-5L3I9 1.7
GTEX-145LV-1326-SM-5S2QI 1.7
GTEX-T5JC-1726-SM-4DM6U 1.7
GTEX-Y9LG-0626-SM-4WWDH 1.7
GTEX-YF7O-0926-SM-5IFIF 1.7
GTEX-111YS-0926-SM-5EGGI 1.6
GTEX-R55E-1326-SM-48FCR 1.6
GTEX-S341-0526-SM-4AD5U 1.6
GTEX-V955-1126-SM-4JBH3 1.6
GTEX-WFJO-0826-SM-4LVM5 1.6
GTEX-WFON-0826-SM-4LVMI 1.6
GTEX-ZA64-0626-SM-5HL9O 1.6
GTEX-146FQ-1026-SM-5LU8I 1.5
GTEX-XMK1-1326-SM-4B65Q 1.5
GTEX-PLZ4-1626-SM-3P618 1.4
GTEX-TMMY-1126-SM-4DXSX 1.4
GTEX-Y5V5-1626-SM-4VDSG 1.4
GTEX-117YW-1926-SM-5H121 1.3
GTEX-12WSD-1826-SM-5GCOA 1.3
GTEX-13G51-0926-SM-5IFFU 1.3
GTEX-TKQ1-0326-SM-4DXSM 1.3
GTEX-Z9EW-0526-SM-5HL8S 1.3
GTEX-11GSP-1826-SM-5N9DQ 1.2
GTEX-12WSA-1426-SM-5EGJU 1.2
GTEX-145LT-1126-SM-5LUA1 1.2
GTEX-QVUS-0626-SM-447CC 1.2
GTEX-SNMC-0526-SM-4DM69 1.2
GTEX-ZGAY-1126-SM-4WWBS 1.2
GTEX-12ZZX-1326-SM-5DUWI 1.1
GTEX-NPJ8-1926-SM-3MJGB 1.1
GTEX-QDVN-1026-SM-48TZA 1.1
GTEX-QESD-0826-SM-47J4G 1.1
GTEX-Y114-0926-SM-4TT7J 1.1
GTEX-Y5V6-1026-SM-4VBS2 1.1
GTEX-12WSL-1526-SM-5GCP8 1.0
GTEX-14C38-2126-SM-5RQJO 1.0
GTEX-QCQG-0626-SM-48U21 1.0
GTEX-RU72-0726-SM-46MUW 1.0
GTEX-XGQ4-1526-SM-4AT6H 1.0
GTEX-ZE9C-1126-SM-4WWBD 1.0
GTEX-ZUA1-1226-SM-5NQ6O 1.0
GTEX-11EM3-0826-SM-5N9CC 0.9
GTEX-12696-1326-SM-5FQTJ 0.9
GTEX-13NZB-1226-SM-5J2MW 0.9
GTEX-13O21-0626-SM-5IJDI 0.9
GTEX-1497J-2726-SM-5SI9W 0.9
GTEX-SUCS-0726-SM-4DM7J 0.9
GTEX-Y5LM-1026-SM-4VDSQ 0.9
GTEX-YEC3-2526-SM-4YCDN 0.9
GTEX-ZYY3-1526-SM-5SIA9 0.9
GTEX-13FHO-1726-SM-5IFGM 0.8
GTEX-QEG5-1426-SM-447AS 0.8
GTEX-UJMC-0926-SM-4IHLK 0.8
GTEX-WFG8-1226-SM-4V6EI 0.8
GTEX-ZVE2-1326-SM-5NQ94 0.8
GTEX-11LCK-1726-SM-5S2OQ 0.7
GTEX-13U4I-1126-SM-5LU3S 0.7
GTEX-13W3W-1626-SM-5LU35 0.7
GTEX-144GN-0626-SM-5O9B2 0.7
GTEX-QEG4-0726-SM-4R1JL 0.7
GTEX-WOFM-0626-SM-4OOS3 0.7
GTEX-WRHK-0526-SM-4MVOF 0.7
GTEX-X15G-0826-SM-4PQZD 0.7
GTEX-11I78-1526-SM-5A5K7 0.6
GTEX-13D11-1926-SM-5IFGB 0.6
GTEX-OXRK-1326-SM-3NB1A 0.6
GTEX-OXRL-0626-SM-3NM9C 0.6
GTEX-P4QS-0626-SM-3NMD1 0.6
GTEX-QEL4-1426-SM-447AC 0.6
GTEX-S32W-0926-SM-4AD5X 0.6
GTEX-X62O-2226-SM-46MW3 0.6
GTEX-XOTO-2126-SM-4B64U 0.6
GTEX-ZDYS-0826-SM-4WWCR 0.6
GTEX-ZF3C-1626-SM-4WWB4 0.6
GTEX-11DZ1-2026-SM-5A5KG 0.5
GTEX-11NUK-1326-SM-5P9GN 0.5
GTEX-1399U-1026-SM-5J1OC 0.5
GTEX-13CF3-1626-SM-5IFG9 0.5
GTEX-13W46-1926-SM-5J2MF 0.5
GTEX-13X6H-1326-SM-5LU42 0.5
GTEX-145MN-1026-SM-5NQ9G 0.5
GTEX-146FR-0426-SM-5SI97 0.5
GTEX-PSDG-1326-SM-48TD2 0.5
GTEX-QLQW-0526-SM-4R1KS 0.5
GTEX-R55D-1126-SM-48FEB 0.5
GTEX-S33H-0826-SM-4AD5Y 0.5
GTEX-X4EO-1226-SM-4QARR 0.5
GTEX-XUZC-0426-SM-4BOPE 0.5
GTEX-Y3I4-1226-SM-4TT8N 0.5
GTEX-Y8LW-0726-SM-5IFI1 0.5
GTEX-ZAB5-0926-SM-5CVMV 0.5
GTEX-ZPU1-1426-SM-4WWFU 0.5
GTEX-11EMC-2226-SM-5A5JW 0.4
GTEX-12WSK-1126-SM-5LZV8 0.4
GTEX-132Q8-1826-SM-5EGIY 0.4
GTEX-13OVJ-1226-SM-5L3HA 0.4
GTEX-13QBU-1026-SM-5LU3R 0.4
GTEX-OIZI-1426-SM-3NB1T 0.4
GTEX-P78B-1026-SM-3NMC4 0.4
GTEX-S4P3-0426-SM-4AD56 0.4
GTEX-S7SF-0926-SM-4AD4M 0.4
GTEX-U3ZH-1026-SM-4DXUZ 0.4
GTEX-ZTX8-0226-SM-5E44D 0.4
GTEX-ZXES-1126-SM-5GZXN 0.4
GTEX-ZYVF-2226-SM-5GIDD 0.4
GTEX-ZZ64-0226-SM-5E44X 0.4
GTEX-12KS4-0926-SM-5BC5S 0.3
GTEX-13111-0826-SM-5LZV3 0.3
GTEX-13O1R-1326-SM-5IJF5 0.3
GTEX-13X6I-1026-SM-5LU4C 0.3
GTEX-14A6H-1326-SM-5NQBC 0.3
GTEX-14ICL-0526-SM-5RQJ6 0.3
GTEX-N7MT-0326-SM-48TDP 0.3
GTEX-R45C-1226-SM-48FEE 0.3
GTEX-RTLS-1126-SM-46MUQ 0.3
GTEX-T5JW-1326-SM-4DM5G 0.3
GTEX-WFG7-1126-SM-4LMK3 0.3
GTEX-XLM4-2326-SM-4TT2D 0.3
GTEX-YFC4-1226-SM-5LU9R 0.3
GTEX-ZAB4-1126-SM-5HL86 0.3
GTEX-ZZPT-1426-SM-5N9C5 0.3
GTEX-11DYG-1326-SM-5N9DO 0.2
GTEX-11ZTS-2626-SM-5EGIC 0.2
GTEX-1212Z-2126-SM-5FQTM 0.2
GTEX-12ZZW-1726-SM-5DUVD 0.2
GTEX-139TU-1226-SM-5J2NL 0.2
GTEX-139UW-1126-SM-5IJEJ 0.2
GTEX-13O3Q-0826-SM-5IFGF 0.2
GTEX-13X6K-2126-SM-5O9D4 0.2
GTEX-144FL-2726-SM-5O98Z 0.2
GTEX-145ME-0526-SM-5QGQV 0.2
GTEX-145MF-1426-SM-5O9B6 0.2
GTEX-14BIN-2726-SM-5RQIE 0.2
GTEX-PVOW-1626-SM-48TC9 0.2
GTEX-R3RS-1326-SM-48FE7 0.2
GTEX-RNOR-1226-SM-48FDQ 0.2
GTEX-RUSQ-0826-SM-47JWW 0.2
GTEX-WH7G-0926-SM-4LVMJ 0.2
GTEX-WK11-1026-SM-4OOS8 0.2
GTEX-XMD2-1326-SM-4YCET 0.2
GTEX-YECK-1626-SM-5IFHQ 0.2
GTEX-11ZU8-1526-SM-5EGHX 0.1
GTEX-13FLV-1126-SM-5J2NO 0.1
GTEX-144GO-2726-SM-5O9A2 0.1
GTEX-145LS-1826-SM-5LUAZ 0.1
GTEX-145MO-1426-SM-5Q5BS 0.1
GTEX-148VJ-1026-SM-5LU98 0.1
GTEX-TSE9-1226-SM-4DXTM 0.1
GTEX-XQ3S-1126-SM-4BOPK 0.1
GTEX-Y111-1626-SM-57WCY 0.1
GTEX-YJ89-1526-SM-5P9IR 0.1
GTEX-ZYW4-1326-SM-5E45N 0.1
GTEX-13PVQ-1726-SM-5IFF3 0.0
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

22.4

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 22.4
FF:10015-101C6 68,74,75 years, mixed 22.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.