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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:1.8TPM
GTEx:4.2RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB000045

 

Endothelial cells

Low   Low   Not detected  

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Not detected   Not detected  

Neuropil

Medium   Not detected   Not detected  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

1.8

N/A Male, age 5
Sample 1
TPM: 3.2
overview Female, age 40
Sample 2
TPM: 0.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 1.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

4.2

GTEx sample id

RPKM

2.43.75.30.98.9024681012141618202224262830
 
2.43.75.30.98.9024681012141618202224262830

Brain - Cortex

Brain - Cortex
RPKM: 4.6
Samples: 114

Max RPKM: 31
Min RPKM: 0.9
Std RPKM: 3.8
Median RPKM: 3.6
GTEX-Q2AG-2926-SM-2HMJ3 31.0
GTEX-13OVJ-2826-SM-5L3GW 20.1
GTEX-11OF3-2926-SM-5HL78 13.9
GTEX-13IVO-2926-SM-5L3CZ 11.1
GTEX-QVUS-2826-SM-3GADB 10.4
GTEX-13S7M-3126-SM-5RQJQ 10.2
GTEX-13FLW-1426-SM-5K7YE 9.7
GTEX-12WSA-2926-SM-5EQ4D 9.6
GTEX-13G51-3026-SM-5IJB8 9.6
GTEX-13JVG-3126-SM-5L3FH 8.9
GTEX-12WSH-3026-SM-5CVNI 8.6
GTEX-13FHP-3026-SM-5IJBS 8.5
GTEX-13NYB-3026-SM-5IJD7 8.0
GTEX-ZZPT-3026-SM-5GZXH 7.9
GTEX-Y111-2726-SM-4TT3N 7.5
GTEX-11WQK-3026-SM-5EQL6 7.3
GTEX-OXRN-2426-SM-2I5EQ 7.2
GTEX-Y8DK-0826-SM-4TT3T 7.0
GTEX-111FC-3126-SM-5GZZ2 6.9
GTEX-WZTO-2926-SM-3NM9I 6.8
GTEX-11GSO-2926-SM-5HL73 6.7
GTEX-1399T-3026-SM-5KLZC 6.5
GTEX-11ZUS-2926-SM-5FQSL 6.4
GTEX-14A5I-2926-SM-5Q5CQ 6.3
GTEX-13FHO-3026-SM-5J1O9 6.1
GTEX-ZYFD-3026-SM-5E44C 5.7
GTEX-QVJO-1426-SM-2S1QY 5.5
GTEX-ZE7O-3126-SM-5HL5X 5.4
GTEX-ZVT3-3026-SM-5E43N 5.3
GTEX-11DXW-1126-SM-5H12Q 5.2
GTEX-11OC5-0726-SM-5P9JK 5.2
GTEX-13NYC-2826-SM-5K7WR 5.2
GTEX-13VXU-2926-SM-5LU5C 5.1
GTEX-145MH-3026-SM-5Q5DZ 5.1
GTEX-1128S-2726-SM-5H12C 5.0
GTEX-13OW7-3026-SM-5L3GY 5.0
GTEX-139T8-1026-SM-5J2MC 4.9
GTEX-11DXY-3226-SM-5GIDE 4.8
GTEX-11EI6-3026-SM-5GZZO 4.7
GTEX-13OW8-2826-SM-5L3GC 4.7
GTEX-XOTO-3026-SM-4B65M 4.6
GTEX-11GS4-3126-SM-5A5LH 4.5
GTEX-11NUK-2926-SM-5A5MD 4.4
GTEX-11O72-2926-SM-5BC4V 4.4
GTEX-12ZZW-2926-SM-5LZUP 4.4
GTEX-XLM4-3026-SM-4AT6L 4.4
GTEX-T6MN-2626-SM-32PMQ 4.3
GTEX-YJ89-3026-SM-5IFJI 4.2
GTEX-RNOR-2326-SM-2TF4I 4.0
GTEX-13FXS-3126-SM-5J2NN 3.8
GTEX-13NYS-3126-SM-5KLYV 3.8
GTEX-13OW6-3026-SM-5J2MI 3.8
GTEX-13X6J-3026-SM-5Q5CU 3.8
GTEX-PWO3-0926-SM-2I5EY 3.8
GTEX-12ZZX-2926-SM-5GCOQ 3.7
GTEX-13X6K-2926-SM-5Q5D5 3.7
GTEX-QDT8-2926-SM-32PKC 3.7
GTEX-13PVQ-3026-SM-5SI93 3.6
GTEX-ZUA1-3026-SM-59HJC 3.6
GTEX-11PRG-2926-SM-5987A 3.5
GTEX-12ZZZ-3026-SM-5BC67 3.5
GTEX-T2IS-3026-SM-32QPM 3.5
GTEX-WWYW-3126-SM-3NB39 3.5
GTEX-13QIC-2926-SM-5J2NF 3.4
GTEX-145LS-3126-SM-5Q5BY 3.4
GTEX-131XW-3126-SM-5LZUC 3.3
GTEX-PVOW-2526-SM-2XCF7 3.3
GTEX-T5JC-2426-SM-3NMDB 3.3
GTEX-144FL-3026-SM-5O99C 3.2
GTEX-12WSC-3026-SM-5GCNF 3.1
GTEX-TSE9-3026-SM-3DB76 3.1
GTEX-1313W-3126-SM-5LZUI 3.0
GTEX-WVLH-3026-SM-3MJG9 3.0
GTEX-12126-1026-SM-5P9JJ 2.9
GTEX-131YS-3126-SM-5KLYT 2.9
GTEX-144GL-3026-SM-5Q5CW 2.9
GTEX-11GSP-3226-SM-5986O 2.8
GTEX-13SLX-3126-SM-5S2Q5 2.8
GTEX-QMR6-1426-SM-32PLA 2.8
GTEX-R55F-1326-SM-5S2V4 2.8
GTEX-12ZZY-3026-SM-5GCOU 2.7
GTEX-145MG-3026-SM-5RQJA 2.7
GTEX-13JUV-2926-SM-5LZX7 2.6
GTEX-13O3O-3126-SM-5KM3H 2.5
GTEX-WL46-2926-SM-3LK82 2.5
GTEX-132Q8-3026-SM-5PNVG 2.4
GTEX-Z93S-2926-SM-57WB9 2.4
GTEX-11EMC-3226-SM-5EGKW 2.3
GTEX-YFC4-3126-SM-5PNV6 2.3
GTEX-X4XX-3026-SM-3NMB2 2.2
GTEX-RU72-3026-SM-5SI7Y 2.1
GTEX-147GR-3026-SM-5S2ML 2.0
GTEX-12WSD-3126-SM-5HL7P 1.9
GTEX-13O3Q-2926-SM-5KM45 1.9
GTEX-N7MT-1126-SM-5SI7V 1.9
GTEX-ZAK1-3026-SM-5S2MJ 1.9
GTEX-1117F-3226-SM-5N9CT 1.8
GTEX-NPJ8-1526-SM-2D7VU 1.8
GTEX-13PL6-3126-SM-5LUAR 1.7
GTEX-14BMV-3026-SM-5S2PQ 1.7
GTEX-WHSE-3026-SM-3P5ZH 1.7
GTEX-ZAJG-3126-SM-5HL9J 1.7
GTEX-14ASI-3026-SM-5S2PN 1.5
GTEX-NPJ7-2726-SM-2I3FT 1.5
GTEX-117XS-3026-SM-5N9CA 1.4
GTEX-1192X-3126-SM-5N9BY 1.4
GTEX-145MF-2726-SM-5O995 1.4
GTEX-11TTK-2926-SM-5PNYP 1.3
GTEX-11ONC-2926-SM-5P9JM 1.2
GTEX-X585-3026-SM-46MWF 1.2
GTEX-11NV4-2126-SM-5N9DS 1.1
GTEX-13OVH-3026-SM-5MR4N 1.1
GTEX-UTHO-3026-SM-3GAFB 1.1
GTEX-1445S-3026-SM-5O9BR 0.9
Show all
1.93.14.80.99.102468101214161820
 
1.93.14.80.99.102468101214161820

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 3.7
Samples: 108

Max RPKM: 21.8
Min RPKM: 0.9
Std RPKM: 2.6
Median RPKM: 3.1
GTEX-139TS-0011-R10a-SM-5K7TU 21.8
GTEX-P44H-0011-R10A-SM-2XCEK 9.5
GTEX-Z93S-0011-R10a-SM-4RGNM 9.1
GTEX-RVPU-0011-R10A-SM-2XCAH 8.6
GTEX-12WSC-0011-R10a-SM-5GU57 8.1
GTEX-145LS-0011-R10a-SM-5PNUQ 7.7
GTEX-YFC4-0011-R10a-SM-4SOK5 7.6
GTEX-ZV68-0011-R10a-SM-51MT7 7.6
GTEX-QVJO-0011-R10A-SM-2S1QJ 7.2
GTEX-Y8DK-0011-R10A-SM-4SOK1 6.7
GTEX-11WQK-0011-R10a-SM-5BC6R 6.5
GTEX-S7SE-0011-R10A-SM-2XCDF 6.4
GTEX-131YS-0011-R10b-SM-5EQ5N 6.1
GTEX-T5JC-0011-R10A-SM-32PM2 6.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 6.0
GTEX-11ZUS-0011-R10b-SM-5BC79 5.8
GTEX-ZAB4-0011-R10a-SM-4SOKH 5.8
GTEX-ZUA1-0011-R10a-SM-51MT6 5.8
GTEX-13N2G-0011-R10a-SM-5MR34 5.7
GTEX-NPJ8-0011-R10A-SM-2YUMO 5.5
GTEX-12WSD-0011-R10b-SM-5GU79 5.4
GTEX-X261-0011-R10B-SM-4E3JT 5.4
GTEX-YJ89-0011-R10a-SM-4SOK9 5.4
GTEX-13OW7-0011-R10a-SM-5L3H3 5.3
GTEX-X4EP-0011-R10B-SM-4QASJ 5.3
GTEX-14753-0011-R10b-SM-5S2WE 5.2
GTEX-13OVJ-0011-R10b-SM-5L3HT 5.0
GTEX-Q2AG-0011-R10A-SM-2HMLA 4.8
GTEX-13OVL-0011-R10a-SM-5L3GS 4.7
GTEX-13N1W-0011-R10b-SM-5MR4H 4.5
GTEX-12126-0011-R10b-SM-5BC6T 4.4
GTEX-13OW6-0011-R10a-SM-5L3HE 4.4
GTEX-X585-0011-R10A-SM-46MUY 4.2
GTEX-13OW8-0011-R10a-SM-5L3H6 4.1
GTEX-131XH-0011-R10a-SM-5EGLJ 4.0
GTEX-13FHO-0011-R10b-SM-5J2MM 3.9
GTEX-T6MN-0011-R10A-SM-32QP7 3.9
GTEX-12WSH-0011-R10a-SM-5LZUS 3.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 3.6
GTEX-WWYW-0011-R10A-SM-3NB35 3.6
GTEX-13SLX-0011-R10a-SM-5P9HV 3.5
GTEX-OXRN-0011-R10A-SM-2I5GC 3.5
GTEX-12ZZX-0011-R10b-SM-5DUWK 3.4
GTEX-1313W-0011-R10b-SM-5DUXA 3.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 3.4
GTEX-QMR6-0011-R10A-SM-32PKO 3.4
GTEX-14BIN-0011-R10a-SM-5S2UA 3.3
GTEX-N7MS-0011-R10A-SM-2HMJK 3.3
GTEX-TSE9-0011-R10A-SM-3DB7O 3.3
GTEX-13JUV-0011-R10b-SM-5LZXR 3.2
GTEX-13QJC-0011-R10a-SM-5SI63 3.2
GTEX-147F4-0011-R10b-SM-5S2WC 3.2
GTEX-12WSM-0011-R10a-SM-5DUWV 3.1
GTEX-14BIL-0011-R10a-SM-5SI75 3.1
GTEX-OXRO-0011-R10A-SM-2I5EH 3.1
GTEX-QDT8-0011-R10A-SM-32PKG 3.1
GTEX-WL46-0011-R10A-SM-3MJFQ 3.1
GTEX-12WSF-0011-R10a-SM-5LZVH 3.0
GTEX-145MH-0011-R10b-SM-5PNUK 3.0
GTEX-13CZV-0011-R10b-SM-5LZYD 2.9
GTEX-13NYB-0011-R10a-SM-5KM43 2.9
GTEX-WVLH-0011-R10A-SM-3MJFM 2.9
GTEX-ZF28-0011-R10a-SM-4WWEH 2.9
GTEX-13SLW-0011-R10a-SM-5S2UI 2.8
GTEX-131XW-0011-R10a-SM-5DUVA 2.7
GTEX-13X6J-0011-R10b-SM-5PNWA 2.7
GTEX-147GR-0011-R10b-SM-5S2UM 2.7
GTEX-13FLW-0011-R10b-SM-5LZZF 2.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 2.5
GTEX-13FLV-0011-R10b-SM-5LZZ2 2.5
GTEX-13FXS-0011-R10a-SM-5J2MA 2.4
GTEX-WZTO-0011-R10B-SM-4E3KB 2.4
GTEX-13NYS-0011-R10a-SM-5MR4S 2.3
GTEX-145LU-0011-R10a-SM-5PNWJ 2.3
GTEX-145MG-0011-R10a-SM-5PNWG 2.3
GTEX-13IVO-0011-R10a-SM-5LZY3 2.2
GTEX-13O3Q-0011-R10b-SM-5KM39 2.1
GTEX-13O3O-0011-R10a-SM-5LUA9 2.0
GTEX-QVUS-0011-R10A-SM-3GIK3 2.0
GTEX-ZVT3-0011-R10b-SM-57WB6 2.0
GTEX-11WQC-0011-R10a-SM-57WCT 1.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC 1.9
GTEX-13G51-0011-R10b-SM-5LZYF 1.8
GTEX-1445S-0011-R10a-SM-5PNWB 1.8
GTEX-12ZZY-0011-R10b-SM-5HL7W 1.7
GTEX-13X6I-0011-R10a-SM-5PNWI 1.7
GTEX-N7MT-0011-R10A-SM-2I3E1 1.7
GTEX-13QIC-0011-R10a-SM-5O9C7 1.6
GTEX-13RTJ-0011-R10b-SM-5O9CW 1.6
GTEX-X4XX-0011-R10B-SM-46MWO 1.6
GTEX-11H98-0011-R10b-SM-5NQ98 1.5
GTEX-13NZA-0011-R10b-SM-5KM54 1.5
GTEX-NL3H-0011-R10A-SM-2I3E9 1.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 1.5
GTEX-ZXG5-0011-R10a-SM-57WDD 1.5
GTEX-12WSA-0011-R10b-SM-5P9ET 1.4
GTEX-NPJ7-0011-R10A-SM-2I3E5 1.4
GTEX-XMD1-0011-R10A-SM-4AT4A 1.4
GTEX-ZE7O-0011-R10a-SM-57WAZ 1.4
GTEX-12WSE-0011-R10b-SM-5P9JV 1.3
GTEX-12ZZW-0011-R10b-SM-5HL9X 1.3
GTEX-13JVG-0011-R10b-SM-5KM2P 1.2
GTEX-XLM4-0011-R10A-SM-4AT5P 1.2
GTEX-13X6K-0011-R10a-SM-5P9JR 1.1
GTEX-1477Z-0011-R10b-SM-5S2RF 1.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 0.9
GTEX-13S7M-0011-R10b-SM-5PNZB 0.9
GTEX-NL4W-0011-R10A-SM-2I3DY 0.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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