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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ACTA1
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB000045

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
  DakoCytomation
 

Product name

HPA041264   HPA041271   M0635  

Host species

Rabbit   Rabbit   Mouse  

Clonality

pAb   pAb   mAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand   Supernatant  

Other gene match

ACTB - ENSG00000075624 [100%]
ACTA2 - ENSG00000107796 [96%]
ACTC1 - ENSG00000159251 [96%]
ACTG2 - ENSG00000163017 [96%]
ACTBL2 - ENSG00000169067 [92%]
ACTG1 - ENSG00000184009 [100%]
POTEE - ENSG00000188219 [100%]
POTEF - ENSG00000196604 [100%]
POTEI - ENSG00000196834 [100%]
POTEJ - ENSG00000222038 [100%]
  ACTB - ENSG00000075624 [100%]
ACTA2 - ENSG00000107796 [97%]
ACTC1 - ENSG00000159251 [97%]
ACTG2 - ENSG00000163017 [97%]
ACTBL2 - ENSG00000169067 [92%]
ACTG1 - ENSG00000184009 [100%]
POTEE - ENSG00000188219 [84%]
POTEF - ENSG00000196604 [84%]
POTEI - ENSG00000196834 [84%]
POTEJ - ENSG00000222038 [84%]
   

Released in version

10   10   1  

References

     

VALIDATION SUMMARY

 
 

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB000045

 
Immunohistochemistry

Supported   Supported   Supported  
Western blot

Supported   Uncertain   Uncertain  
Protein array

Approved   Supported    

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB000045

 

Standard validation

Supported   Supported   Supported  

     

Figure description

Immunohistochemical staining of human stomach, upper shows strong membranous positivity in glandular cells.   Immunohistochemical staining of human stomach, upper shows strong membranous positivity in glandular cells.   Immunohistochemical staining of human skeletal muscle shows strong cytoplasmic positivity in myocytes.  

Expression

RNA: detected in 16 tissues
Protein: detected in 73 cell types
  RNA: detected in 16 tissues
Protein: detected in 37 cell types
  RNA: detected in 16 tissues
Protein: detected in 4 cell types
 

Retrieval

HIER pH6   HIER pH6   HIER pH9  

Antibody dilution

1:1800   1:150   1:400  

Literature conformity

Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.  

RNA consistency

Mainly not consistent with RNA expression data.   Mainly not consistent with RNA expression data.   Mainly consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB000045

 

Standard validation

Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Uncertain

Analysis performed using a standard panel of samples.
Weak band of predicted size but with additional bands of higher intensity also present.
  Uncertain

Analysis performed using a standard panel of samples.
Current setup is not applicable due to low RNA count.
 

     

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
     

Target mass (kDa)

121.4, 121.3, 117.4, 42.1, 42, 41.9, 41.8, 41.7, 37.1, 28.2, 26.9, 23.8, 18, 16.8   121.4, 121.3, 117.4, 42.1, 42, 41.9, 41.8, 41.7, 28.2, 26.9, 23.8, 18, 16.8, 16.3, 14.5, 13, 11.4, 11, 8.5   42.1, 28.2  

Antibody dilution

1:250   1:250   1:500  

PROTEIN ARRAY

 
 

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB000045

 

Standard validation

Approved

Pass with quality comment low specificity (binding to 1-2 PrESTs >15% and <40%).
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
   

     

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

1:3000   1:3000    

ANTIGEN INFORMATION

 
 

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB000045

 

Antigen

Recombinant protein fragment   Recombinant protein fragment   Native protein  

Length (aa)

26   37    

Antigen sequence

PKANREKMTQIMFETFNTPAMYVAIQ
 
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD
 
 

Matching transcripts

ACTA1-001 - ENSP00000355645 [96%]
ACTA1-201 - ENSP00000355644 [96%]
  ACTA1-001 - ENSP00000355645 [97%]
ACTA1-201 - ENSP00000355644 [97%]
   

Other gene match

ACTB - ENSG00000075624 [100%]
ACTA2 - ENSG00000107796 [96%]
ACTC1 - ENSG00000159251 [96%]
ACTG2 - ENSG00000163017 [96%]
ACTBL2 - ENSG00000169067 [92%]
ACTG1 - ENSG00000184009 [100%]
POTEE - ENSG00000188219 [100%]
POTEF - ENSG00000196604 [100%]
POTEI - ENSG00000196834 [100%]
POTEJ - ENSG00000222038 [100%]
  ACTB - ENSG00000075624 [100%]
ACTA2 - ENSG00000107796 [97%]
ACTC1 - ENSG00000159251 [97%]
ACTG2 - ENSG00000163017 [97%]
ACTBL2 - ENSG00000169067 [92%]
ACTG1 - ENSG00000184009 [100%]
POTEE - ENSG00000188219 [84%]
POTEF - ENSG00000196604 [84%]
POTEI - ENSG00000196834 [84%]
POTEJ - ENSG00000222038 [84%]
   
ANTIGEN VIEW
ACTA1-001
ACTA1-201
 

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