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Field

Term
Gene name

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External id

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Reliability

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Validation

Method

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Method

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Cell type

Expression

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Specificity

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Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:50.8TPM
GTEx:89.8RPKM
FANTOM5:107.7Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:Not detected
Cells in tubules:High
 

Antibody staining

Antibody HPA005131

 

Antibody CAB025903

 

Cells in glomeruli

Not detected   Not detected  

Cells in tubules

Low   High  
   
   
   

KIDNEY - HPA RNA-seq

Average TPM

50.8

overview Female, age 58
Sample 1
TPM: 18.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 18.7
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 14.2
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 89.5
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 91.2
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 128.5
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 35.9
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 24.4
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 36.3
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

89.8

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 89.8
Samples: 32

Max RPKM: 761.3
Min RPKM: 0.1
Std RPKM: 150.9
Median RPKM: 35.7
GTEX-XPVG-0526-SM-4B65N 761.3
GTEX-147F4-2626-SM-5Q5CS 364.9
GTEX-11OF3-1326-SM-5N9FJ 272.7
GTEX-QDVN-1626-SM-48TZC 271.0
GTEX-13RTJ-2226-SM-5S2Q1 185.2
GTEX-145MN-0326-SM-5QGQI 175.9
GTEX-QLQW-1626-SM-4R1K1 130.6
GTEX-ZC5H-1726-SM-5HL7X 124.0
GTEX-P4QS-1126-SM-3NMD5 80.0
GTEX-NPJ8-2226-SM-3TW8D 72.0
GTEX-1497J-0826-SM-5NQAJ 66.5
GTEX-12WSG-0826-SM-5EQ5A 61.6
GTEX-ZYFG-1626-SM-5GZYY 43.2
GTEX-Y5V6-2026-SM-5IFHO 37.7
GTEX-ZVZP-0926-SM-5GIDB 37.6
GTEX-UPIC-1126-SM-4IHLO 36.8
GTEX-13OVI-1126-SM-5KLZF 34.6
GTEX-ZYFD-1526-SM-5NQ7T 22.4
GTEX-T5JC-1526-SM-4DM68 20.8
GTEX-13O1R-2526-SM-5N9FW 19.7
GTEX-11TTK-1926-SM-5PNW8 19.0
GTEX-11GS4-2326-SM-5A5KS 11.0
GTEX-1399S-0526-SM-5IJG8 5.0
GTEX-ZLFU-0926-SM-5P9F8 4.9
GTEX-N7MS-1626-SM-3LK5F 4.9
GTEX-13112-2126-SM-5GCO4 3.3
GTEX-13NYB-1726-SM-5N9G2 2.7
GTEX-13OW6-1826-SM-5N9F9 2.4
GTEX-RN64-1626-SM-48FD7 0.3
GTEX-13OVL-1826-SM-5KLZR 0.3
GTEX-ZYT6-2226-SM-5GIC9 0.2
GTEX-12696-0926-SM-5FQTV 0.1
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

107.7

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 107.7
FF:10017-101C8 60,62,63 years, female 107.7

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