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EML4

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:23.7TPM
GTEx:11.0RPKM
FANTOM5:67.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Medium
 
 

Antibody staining

Antibody HPA036687

  

Antibody HPA036688

  

Antibody HPA065337

  

Endothelial cells

 Low   High   Low  

Glandular cells

 High   High   Medium  

Peripheral nerve/ganglion

 Medium   High  
        
     
     
     

COLON - HPA RNA-seq

Average TPM

23.7
overview Male, age 54
Sample 1
TPM: 23.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 22.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 26.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 21.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 14.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 18.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 33.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 28.0
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 19.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 30.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 30.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 24.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 15.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

11.0

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 7.1
Samples: 149

Max RPKM: 21.3
Min RPKM: 3
Std RPKM: 2.3
Median RPKM: 6.7
GTEX-13X6I-2726-SM-5Q5ET 21.3
GTEX-14E6C-2226-SM-5QGQG 18.2
GTEX-11PRG-2026-SM-5GU5F 14.2
GTEX-YJ8A-1726-SM-5P9IQ 13.8
GTEX-11WQK-2526-SM-5CVL8 12.6
GTEX-ZTTD-2626-SM-57WEX 11.9
GTEX-ZAB4-2426-SM-5HL8A 11.8
GTEX-13OW6-2226-SM-5N9FL 10.8
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 14.0
Samples: 196

Max RPKM: 29.9
Min RPKM: 4.9
Std RPKM: 5.4
Median RPKM: 14.7
GTEX-13OVJ-1726-SM-5IJDZ 29.9
GTEX-R53T-1326-SM-48FCQ 28.0
GTEX-117YW-1826-SM-5PNY5 27.0
GTEX-144GM-1226-SM-5LU52 26.1
GTEX-WFG7-1526-SM-4LVMG 25.4
GTEX-UPIC-1726-SM-4IHKG 24.7
GTEX-14C38-2626-SM-5RQI4 24.5
GTEX-XMK1-1726-SM-4B64Z 23.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

67.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 67.5
FF:10014-101C5 62,83,84 years, mixed 67.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.