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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:565.3TPM
GTEx:71.9RPKM
FANTOM5:3842.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA034607

 

Antibody CAB047325

 

Glandular cells

High   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

565.3

overview Male, age 65
Sample 1
TPM: 350.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 435.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 869.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 606.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

71.9

GTEx sample id

RPKM

22.070.1105.30.4161.1020406080100120140160180200220240260
 
22.070.1105.30.4161.1020406080100120140160180200220240260

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 71.9
Samples: 88

Max RPKM: 265.8
Min RPKM: 0.4
Std RPKM: 55.2
Median RPKM: 70.1
GTEX-XGQ4-1326-SM-4GIDU 265.8
GTEX-ZYFG-2026-SM-5E43Y 237.2
GTEX-ZVZP-1826-SM-5GZXB 161.1
GTEX-133LE-1426-SM-5IFH1 160.6
GTEX-ZZ64-0526-SM-5GZXM 159.4
GTEX-1122O-1326-SM-5H11F 156.8
GTEX-111YS-1426-SM-5GID8 154.7
GTEX-XXEK-1026-SM-4BRUW 154.0
GTEX-ZYWO-1526-SM-5SIAL 151.6
GTEX-ZA64-1226-SM-5HL7B 147.3
GTEX-Y9LG-1626-SM-5IFHM 134.0
GTEX-YF7O-1826-SM-5IFIU 132.8
GTEX-145LT-1026-SM-5LU9O 131.8
GTEX-13D11-0726-SM-5LZZB 129.1
GTEX-11EQ9-1326-SM-5985X 125.5
GTEX-13FTW-2026-SM-5IJE2 121.8
GTEX-YEC4-1726-SM-4W21E 121.4
GTEX-11P82-0826-SM-5P9GU 117.3
GTEX-ZVT2-2126-SM-5NQ93 116.6
GTEX-YB5E-1526-SM-5IFIE 115.4
GTEX-ZTX8-0526-SM-59HLD 109.9
GTEX-14DAR-1426-SM-5RQIR 106.2
GTEX-ZLV1-1126-SM-4WWBW 105.0
GTEX-131XF-1326-SM-5GCMQ 102.9
GTEX-ZPCL-1726-SM-57WEO 102.5
GTEX-XUZC-1426-SM-4BRV3 101.6
GTEX-1399R-2026-SM-5K7WN 96.6
GTEX-WQUQ-2426-SM-4MVNW 95.7
GTEX-X5EB-1626-SM-4E3IV 94.0
GTEX-11DXZ-1326-SM-5H11X 91.1
GTEX-13113-1226-SM-5EGHT 90.9
GTEX-ZTSS-0926-SM-59865 90.2
GTEX-ZXES-1526-SM-5NQ95 87.1
GTEX-1399U-2126-SM-5IFEZ 85.3
GTEX-11DXX-1626-SM-5H11H 84.3
GTEX-139YR-2226-SM-5IFFW 82.4
GTEX-14E6E-1626-SM-5RQI7 81.5
GTEX-ZPIC-2326-SM-57WDW 80.0
GTEX-WFJO-0926-SM-4LVM2 79.8
GTEX-13CF3-1226-SM-5LZXN 79.8
GTEX-13O61-1326-SM-5KM31 76.5
GTEX-11I78-1126-SM-5A5K5 75.3
GTEX-XAJ8-0526-SM-47JYK 70.7
GTEX-1399S-2026-SM-5KM4B 70.5
GTEX-13PL7-2626-SM-5IFH4 69.7
GTEX-ZVP2-1726-SM-5GU5P 66.3
GTEX-11NSD-1726-SM-5N9C3 66.0
GTEX-ZEX8-1826-SM-57WBH 62.6
GTEX-139T6-1026-SM-5IJGC 60.7
GTEX-ZTPG-2626-SM-57WFX 60.3
GTEX-12BJ1-1926-SM-5HL9Z 55.6
GTEX-XBED-1426-SM-4AT4G 54.4
GTEX-VJYA-0926-SM-4KL1N 50.9
GTEX-Y3IK-1726-SM-4YCCR 50.9
GTEX-11P7K-1626-SM-5GU63 49.9
GTEX-Z9EW-0926-SM-5CVMM 42.5
GTEX-11XUK-1426-SM-5EQMG 41.0
GTEX-13FH7-1226-SM-5IJFK 39.2
GTEX-ZLFU-1526-SM-4WWBT 38.5
GTEX-13RTK-0826-SM-5Q5C6 37.6
GTEX-WFG8-1626-SM-4LVMB 36.2
GTEX-11VI4-1626-SM-5EQKO 25.3
GTEX-13O21-1026-SM-5IJDU 25.2
GTEX-Y5LM-1626-SM-4VDTB 24.6
GTEX-ZP4G-1626-SM-57WGD 22.8
GTEX-WFG7-1726-SM-4LVME 22.3
GTEX-WH7G-1626-SM-4LVMY 21.1
GTEX-12WSK-1526-SM-5CVNO 20.7
GTEX-Y114-1426-SM-4TT6W 19.5
GTEX-WRHK-1026-SM-4MVOD 13.9
GTEX-145ME-0926-SM-5O9AR 12.3
GTEX-X15G-1426-SM-4PQZK 12.1
GTEX-111CU-1326-SM-5NQ8L 11.8
GTEX-131XG-1726-SM-5LZUR 11.0
GTEX-148VJ-2226-SM-5NQ9M 10.6
GTEX-13OVI-1926-SM-5IJCG 10.4
GTEX-13QBU-1926-SM-5IJEW 10.4
GTEX-ZF2S-1726-SM-57WFT 7.2
GTEX-VUSG-1726-SM-4KKZL 5.7
GTEX-ZQG8-2526-SM-57WEQ 5.5
GTEX-ZQUD-0926-SM-57WE3 4.8
GTEX-13111-1426-SM-5DUW3 4.0
GTEX-XMK1-1826-SM-4B66F 2.8
GTEX-1192X-2526-SM-59868 1.7
GTEX-117YX-0326-SM-5GICL 0.9
GTEX-WEY5-1526-SM-4LMJF 0.8
GTEX-ZC5H-2326-SM-4WAYT 0.4
GTEX-UPK5-2026-SM-4JBIM 0.4
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

3842.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 3842.7
FF:10024-101D6 15,40,85 years, mixed 3842.7

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.